- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S356.g07736.01.t
Possible name(s)
TBX1; TBX10; TBX20
Gene model
Location
S356 [104,326 / 108,532]
Amino acid sequence
Length: 308
>Phmamm.CG.MTP2014.S356.g07736.01.p
MCTRIAVANDSFHSMLAHHAVREKNPSPDISDNVDMAPVPGQAHLTPVTLGKPSRQFDHF
IHYPDAAFYPAPEDKQHNPSPGNSGYPEYGKADALHGYPMDSDASGKGDSYRDTSSAGGH
YHSPPPYENQNKGLSQNNVDLIKFEQSLAEMDKQGTTTGELSHAATSSTSPTSSCTRHEP
FRKNEKVANVEARLEMKSLWNEFNELGTEMIVTKAGRRMFPTFQVKVFGLDLDSEYILLM
DFVAVDDKRYRYAFHTSSWSVAGKADASMPPRIHVHPDSPAKGGHWMKQIVSFDKLKLTN
NLLDDNGH
Nucleotide sequence
Length: 995
>Phmamm.CG.MTP2014.S356.g07736.01.t
TGCCGCCTTTGTTTGAAGTTTATAGGTGTTAAATCTGATTACGGGCCAGTGATTGTCGAT
TAACGGGCTAATGTGCACCCGAATCGCCGTCGCTAATGATTCATTTCACTCGATGTTAGC
CCATCATGCGGTAAGAGAGAAGAACCCATCGCCCGACATTTCCGATAATGTCGATATGGC
CCCGGTCCCTGGGCAAGCCCATTTAACCCCGGTGACCTTGGGCAAGCCGAGCCGTCAGTT
TGACCACTTCATACACTACCCTGATGCGGCGTTCTATCCAGCTCCAGAAGACAAGCAGCA
TAATCCTTCGCCGGGAAATTCCGGCTACCCCGAATACGGCAAAGCCGACGCATTGCACGG
CTACCCGATGGACAGCGACGCGAGCGGCAAAGGCGACAGTTACCGTGACACTTCATCCGC
CGGAGGTCACTATCACTCTCCGCCACCATACGAAAATCAAAACAAGGGCCTTTCCCAAAA
CAATGTGGATTTGATAAAGTTCGAACAATCGCTTGCCGAGATGGACAAGCAAGGCACGAC
GACGGGGGAGTTGAGTCACGCCGCTACGTCATCAACTTCGCCTACGTCATCGTGTACACG
TCACGAGCCGTTTCGTAAGAATGAGAAGGTGGCAAATGTCGAGGCGCGACTGGAGATGAA
ATCACTGTGGAATGAGTTTAATGAACTTGGAACAGAGATGATTGTCACGAAAGCGGGAAG
ACGAATGTTTCCAACTTTTCAAGTCAAAGTCTTTGGTCTTGACCTCGACAGCGAATATAT
TCTACTAATGGACTTCGTAGCGGTCGATGACAAAAGATACAGATACGCTTTTCACACATC
GAGTTGGTCGGTGGCGGGAAAGGCCGACGCTTCGATGCCTCCACGAATCCACGTTCATCC
CGATTCACCCGCAAAAGGAGGACATTGGATGAAACAGATCGTTTCGTTCGACAAGTTAAA
ACTTACAAACAACCTTCTCGACGACAACGGACATG
| PANTHER |
TF_T-box (IPR001699) - T[160-308] 6.3E-80 |
| Gene3D |
T-box_sf (IPR036960) - T[176-308] 4.1E-54 |
| SMART |
TF_T-box (IPR001699) - T[189-308] 2.2E-46 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[189-308] 1.62E-44 |
| Pfam |
TF_T-box (IPR001699) - T[193-306] 1.8E-42 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[194-308] 45.271 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[199-218] . - T[275-293] . |
| PRINTS |
TF_T-box (IPR001699) - T[207-231] 5.2E-23 - T[274-287] 5.2E-23 - T[291-300] 5.2E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX20_HUMAN | 58.915 % | 172 | 2.74E-50 |
| TBX1_HUMAN | 79.508 % | 213 | 1.44E-66 |
| TBX10_HUMAN | 73.016 % | 209 | 4.52E-65 |