Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S347.g07619.01.t

Possible name(s)

TIMM44

Gene model

Phmamm.CG.MTP2014.S347.g07619

Location

S347 [58,272 / 61,989]

Sequences

Amino acid sequence

Length: 423

>Phmamm.CG.MTP2014.S347.g07619.01.p
PLSRFIVSSTLRRSAVKCITEHQQNQIVMTRELLAHFLPVVYTSRSYSQRKGFLESLMDN
IKQEYNKDTELKETIAKFRKEAQELEDSDALKQARQKFKDIEKEAIPEALGKVKSKISET
AEGFGKTEFGKAAGKFTEGLSGAAKQAADSETLKKAQSILTKIAEGSGVAPDSLYKRPAK
LRKRNDNPFGEVEREFEANTDATNVVMHKDSVWNQQWESFKNSKVGERISDMKMQFDESD
NVFIRGSRFVTDKISSIAGGMFGGTEISKIMTEIVKTDPNFSAQEFIEFCKNDIIPNMME
AIAQNDEEIIKDWCSEAPYNQIIFPVKQAEQIGCQYELATIDVDHVDIAGATKVDQGPVL
VISFQTQQIMVVRDKKGIVVEGDENQVMRVYHVWALCRDVEEMDPRAAWKIIDQSMSASP
MLL

Nucleotide sequence

Length: 1,387

>Phmamm.CG.MTP2014.S347.g07619.01.t
GCCATTGTCACGATTTATTGTCAGTTCCACTCTACGGAGGAGTGCTGTGAAATGTATAAC
GGAGCACCAACAGAACCAAATAGTGATGACCAGGGAACTATTAGCCCATTTTTTGCCAGT
GGTGTACACCAGCAGATCTTACTCCCAAAGAAAAGGTTTTTTAGAAAGCCTCATGGACAA
TATAAAGCAGGAGTATAATAAAGATACTGAGCTAAAAGAAACAATCGCTAAGTTCCGTAA
AGAAGCACAAGAACTGGAGGATTCAGATGCTTTAAAACAAGCTCGTCAAAAGTTCAAAGA
CATTGAGAAGGAAGCAATTCCAGAAGCATTGGGAAAAGTCAAGTCAAAAATTTCTGAGAC
CGCTGAAGGCTTCGGAAAAACAGAGTTTGGAAAGGCAGCAGGAAAGTTCACAGAGGGTTT
GTCTGGTGCTGCAAAGCAAGCTGCAGACAGTGAAACTTTAAAAAAGGCACAATCCATCCT
CACAAAAATTGCAGAAGGGTCTGGGGTTGCACCTGACAGCTTGTACAAAAGACCCGCAAA
ATTAAGAAAAAGGAATGACAATCCATTTGGCGAAGTGGAAAGGGAGTTTGAAGCCAACAC
TGATGCCACAAATGTTGTCATGCATAAAGATTCCGTGTGGAATCAACAGTGGGAGTCGTT
TAAGAACAGTAAAGTGGGAGAAAGAATATCAGACATGAAAATGCAGTTTGATGAAAGTGA
CAACGTTTTTATTAGAGGGTCGCGCTTTGTTACAGATAAAATTTCCTCAATAGCAGGTGG
CATGTTTGGGGGAACTGAAATCTCCAAAATCATGACAGAGATTGTCAAAACGGATCCTAA
TTTTTCTGCGCAAGAATTTATAGAATTTTGTAAAAATGACATTATTCCGAATATGATGGA
GGCAATTGCGCAGAATGATGAGGAAATTATTAAAGATTGGTGCAGCGAAGCACCCTACAA
CCAAATAATATTTCCTGTGAAGCAAGCAGAACAAATTGGTTGCCAATATGAACTAGCAAC
AATTGACGTTGACCATGTTGATATTGCTGGTGCTACAAAAGTTGACCAAGGACCTGTTTT
GGTCATCAGTTTTCAGACACAACAAATTATGGTGGTCAGGGATAAAAAAGGCATTGTGGT
GGAAGGAGATGAAAACCAAGTCATGAGAGTATACCATGTATGGGCTTTATGTCGTGATGT
TGAAGAAATGGATCCCAGAGCAGCCTGGAAGATTATTGACCAATCCATGTCAGCTTCACC
AATGCTGCTTTAAATTCGATGAATTTTGTATTTCACACTTTAAACTACACAACTTGAGTT
GTGCAGGCACTGCAACAGGCCATGGTGGCCATGTCAACATTTATGCAATTACAATTTTCA
TTTCCCT

InterProScan

PIRSF	Tim44 (IPR017303) - T[8-423] 1.6E-115
SUPERFAMILY	NTF2-like_dom_sf (IPR032710) - T[229-415] 1.14E-54
SMART	Tim44-like_dom (IPR007379) - T[267-416] 1.9E-29
Pfam	Tim44-like_dom (IPR007379) - T[270-412] 1.4E-36

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TIM44_HUMAN	43.614 %	347	3.42E-116