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  1. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S346.g07614.01.t

Possible name(s)

NCAPD3

Gene model

Phmamm.CG.MTP2014.S346.g07614

Location

S346 [140,117 / 151,587]

Sequences

Amino acid sequence

Length: 1,003

>Phmamm.CG.MTP2014.S346.g07614.01.p
MKPLGVCGGIAPRSGDSFLFFHEVIFEKSVSAIKVAATANRNQSQSKQSKSTQRQGRDSD
SHHHDDDMETDQVVELSTQEAVKLVGNLTDVLQDFCYFVQAFSFKNKPMPLKATVEGLVE
VFKCFGEATFTTLSRDIEDMSLPDQLSCKALQIIVNKNPTQSPDRSEFKHHMALRVATVL
RNLPAKAYAEFIQWLELLANGQRVSYRTSAMAVIGELLLHVKSFPEAEQDLSENLVPCLS
PAFLLQVVVNNFTDPAPTVRSRALAVLTEMMKKKVVSSNVFATLVQDLDLTASTTSSVAA
TPGTASGQSRRTLFMDFSTPNLLPLLTPRCSEGKVAVRRNAVQTLAASLCNGYITVNKEA
LDILNSLCRDPLLSVRKLAIQSATAVLTAYPDSSDVHVMWMKCMLPSVFDNETSMQEKCV
QLSEEVLLNGIMDDSEKETLAWSLLKFLTTEDGDQMRVYFQEIIKHWKLQNKLNKKILKK
LCSNLTNSERNACAWMLIRMFTLYFGDATTAAMVVEQWRKQIDSDILTVTKMDVITSVGE
VAGHLKKEEVTSVIEELKSAVSHNKTSHHLIGFHFEAIQKLFNKQYSNQADAKKAMDTWC
TKLLKNTDVWLSEVIMKTSPGDFDKDLLVKHLNVVGQTSQRSPNNVPQRVLLSIQALLTS
PVDGDNDIAVPSSQGLSQPLSQFRNTGISSDIRAHTIINLGRACLLNEKLAKKVVPALAR
EMGTCKDEAVRNNVLVVLTDLCVLHTQLVDPYLSEMATCLADESAVIRNHAVILISDLLK
EIRLKSLKNKDGDGEEEEMMGTQAEQNAMKQKMKQKIISQVVKKNLIENIIPIIIELKNM
LTEKKSPLVHNVMLYLKEVMQEYRAEVDEILSADKQLAREIEFDLKRFEREEEEAEKLKE
QTQLATASRERRKSVVSRPVSVATTPSTGQNTNPQTPVGGDNAAQLLTPATAKRRNRPLN
IQAILKSARKLTNTEHQTPSRDPLSETCASLSRAASTPSKHHV

Nucleotide sequence

Length: 3,012

>Phmamm.CG.MTP2014.S346.g07614.01.t
ATGAAACCCCTAGGGGTCTGTGGTGGGATAGCTCCAAGGAGTGGGGATTCTTTTCTCTTT
TTTCATGAAGTTATTTTTGAGAAATCTGTCAGTGCCATAAAGGTGGCAGCCACTGCAAAC
CGAAATCAAAGTCAATCAAAACAATCAAAGTCAACTCAAAGGCAGGGAAGAGATTCTGAT
TCTCATCACCATGATGATGATATGGAAACTGATCAAGTGGTTGAGCTTTCAACACAAGAA
GCAGTGAAGCTAGTGGGAAATCTTACAGATGTTTTGCAAGATTTCTGCTATTTTGTGCAA
GCCTTCTCCTTTAAGAACAAACCCATGCCATTGAAAGCAACTGTAGAAGGACTAGTGGAA
GTATTTAAGTGTTTTGGAGAGGCCACATTTACCACTCTTTCACGTGATATTGAGGACATG
TCTCTGCCTGATCAGCTTTCATGCAAAGCATTGCAGATAATTGTAAACAAAAATCCAACT
CAGTCCCCAGATCGTTCTGAATTTAAGCATCACATGGCACTTCGGGTTGCCACTGTGTTA
CGAAATTTGCCAGCGAAGGCTTATGCTGAGTTCATCCAATGGTTAGAACTGTTGGCAAAT
GGACAAAGGGTGTCATATCGAACCTCTGCCATGGCTGTGATTGGAGAGCTCTTACTTCAT
GTAAAATCCTTTCCTGAAGCTGAGCAAGACCTGTCAGAAAATCTGGTGCCTTGCCTTTCC
CCAGCCTTTTTATTACAAGTGGTAGTAAACAACTTTACTGACCCTGCTCCAACAGTTCGT
TCCCGAGCTCTTGCTGTTCTCACTGAAATGATGAAAAAGAAAGTTGTCTCATCGAACGTC
TTTGCTACACTTGTACAAGACTTGGATCTAACTGCTTCCACCACCAGTTCGGTTGCTGCA
ACTCCTGGAACAGCCAGTGGACAATCAAGGCGAACTTTGTTCATGGATTTTTCTACACCA
AACCTTTTGCCATTACTTACACCAAGATGCTCAGAGGGAAAAGTTGCAGTACGAAGGAAT
GCTGTGCAAACTCTTGCGGCATCACTGTGCAATGGATATATAACAGTTAATAAGGAGGCA
TTGGATATTCTGAATTCTCTGTGTCGTGATCCTCTTCTAAGTGTGAGAAAACTTGCAATT
CAAAGTGCTACTGCTGTGCTTACAGCGTATCCAGATAGTAGTGACGTTCATGTAATGTGG
ATGAAATGTATGCTGCCATCAGTATTTGACAATGAAACATCAATGCAAGAGAAATGTGTG
CAGTTGTCAGAGGAAGTGCTGTTAAATGGAATTATGGACGACTCAGAAAAAGAAACTCTA
GCCTGGAGTTTGTTAAAGTTTTTAACCACTGAAGATGGCGATCAAATGAGAGTTTACTTT
CAAGAAATCATTAAGCACTGGAAACTTCAAAACAAGCTCAACAAGAAGATTCTCAAAAAG
TTGTGTTCAAATTTAACAAACAGTGAAAGAAACGCTTGTGCATGGATGTTAATTCGAATG
TTTACTCTGTACTTTGGTGATGCAACCACTGCTGCAATGGTTGTGGAGCAATGGAGAAAA
CAAATTGATTCTGACATCCTCACAGTCACCAAGATGGATGTAATTACTTCTGTTGGTGAA
GTTGCCGGGCATTTGAAAAAGGAAGAAGTGACATCTGTTATAGAGGAATTAAAGTCAGCA
GTTTCACACAACAAGACATCTCATCATTTGATTGGCTTCCACTTTGAAGCAATTCAAAAG
CTGTTCAATAAACAATATTCCAACCAAGCTGATGCTAAGAAAGCGATGGATACTTGGTGC
ACCAAGCTTCTCAAAAACACTGACGTATGGTTGTCTGAAGTTATTATGAAAACATCACCT
GGCGATTTCGACAAAGACTTACTTGTAAAGCACCTTAATGTGGTCGGTCAAACATCACAG
CGATCACCCAATAATGTTCCCCAACGAGTCCTGCTTTCCATTCAAGCTCTGCTTACAAGT
CCCGTTGATGGTGATAACGACATTGCAGTGCCGTCCAGCCAAGGTTTATCGCAACCCTTG
TCCCAATTTCGCAACACGGGAATATCATCGGACATTCGAGCCCACACCATCATCAATTTA
GGTCGGGCTTGCTTGCTCAACGAGAAACTTGCCAAAAAAGTTGTACCCGCCTTAGCACGC
GAGATGGGCACATGTAAGGACGAAGCTGTTAGGAACAACGTGCTTGTTGTGTTGACCGAC
CTGTGTGTTTTGCATACTCAGCTTGTTGACCCGTATCTTTCCGAAATGGCTACATGTTTG
GCCGACGAGTCAGCAGTTATCAGGAATCACGCTGTCATTTTGATCAGCGATTTACTAAAG
GAAATTCGCCTCAAGTCGTTAAAAAATAAAGATGGCGATGGTGAAGAGGAGGAAATGATG
GGTACTCAAGCGGAACAAAACGCAATGAAGCAGAAAATGAAACAGAAAATTATTTCCCAG
GTGGTCAAAAAGAATCTAATAGAAAACATCATTCCCATTATTATTGAGCTGAAAAACATG
TTGACCGAAAAGAAGAGTCCCCTTGTTCATAATGTGATGCTTTATCTTAAGGAAGTAATG
CAGGAATATCGAGCAGAGGTGGATGAAATACTTTCAGCTGACAAACAACTTGCTCGTGAG
ATTGAGTTTGACCTCAAACGATTTGAGCGTGAGGAAGAAGAAGCTGAAAAGTTAAAGGAA
CAAACCCAACTTGCAACTGCTAGCAGAGAACGAAGAAAATCAGTCGTGTCGAGACCAGTG
AGTGTTGCGACCACGCCCTCTACCGGACAAAATACTAATCCACAAACACCAGTAGGTGGC
GATAATGCTGCACAACTTCTCACACCTGCCACTGCCAAGCGAAGGAATCGTCCTTTGAAT
ATTCAAGCGATTCTCAAATCAGCGCGGAAACTCACCAACACGGAACACCAAACTCCAAGC
AGAGACCCACTTTCGGAAACTTGCGCTAGTCTGTCTAGGGCTGCTTCAACTCCAAGTAAA
CACCATGTTTAA

InterProScan

PANTHER
CND1/NCAPD3 (IPR026971) - T[18-129] 7.5E-174 - T[154-781] 7.5E-174 - T[780-977] 7.5E-174
SUPERFAMILY
ARM-type_fold (IPR016024) - T[150-844] 5.76E-28
Pfam
Cnd1_C (IPR032682) - T[729-869] 3.6E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNDD3_HUMAN 31.611 % 286 2.1E-80