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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S33.g01298.01.t

Possible name(s)

RPL36A; RPL36A-HNRNPH2; RPL36AL

Gene model

Phmamm.CG.MTP2014.S33.g01298

Location

S33 [204,274 / 206,085]

Sequences

Amino acid sequence

Length: 110

>Phmamm.CG.MTP2014.S33.g01298.01.p
LYLIQVNVPKTRRTYCGHKDCKRHTLHKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKP
VFHKKAKTTKKIVLRMECTVCKSRKQLPIKRCKHFELGGDKKRKGQMIQF

Nucleotide sequence

Length: 333

>Phmamm.CG.MTP2014.S33.g01298.01.t
TTGTATTTGATACAGGTTAACGTCCCAAAGACCCGCCGCACCTATTGCGGACACAAGGAC
TGCAAACGCCACACTTTGCACAAAGTTACTCAGTACAAGACTGGCAAGGCCTCTCTGTAT
GCCCAGGGAAAGCGGCGTTATGACCGAAAACAGTCTGGATATGGAGGTCAAACCAAACCT
GTTTTCCACAAAAAGGCCAAAACCACCAAGAAGATTGTATTGAGGATGGAATGCACTGTT
TGCAAATCAAGAAAGCAACTTCCCATCAAGCGTTGCAAGCACTTTGAGTTGGGTGGAGAC
AAAAAGAGAAAGGGACAAATGATCCAGTTCTAG

InterProScan

SUPERFAMILY
Ribosomal_zn-bd (IPR011332) - T[6-98] 8.24E-36
PANTHER
Ribosomal_L44e (IPR000552) - T[6-108] 1.4E-54
ProDom
Ribosomal_L44e (IPR000552) - T[14-97] 1.0E-35
Pfam
Ribosomal_L44e (IPR000552) - T[23-98] 5.9E-36
ProSitePatterns
Ribosomal_L44e (IPR000552) - T[67-78] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL36A_HUMAN 78.505 % 161 5.18E-53
RL36L_HUMAN 77.57 % 160 1.18E-52