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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S337.g07466.01.t

Possible name(s)

INO80B; INO80B-WBP1; NSA2

Gene model

Phmamm.CG.MTP2014.S337.g07466

Location

S337 [132,919 / 137,142]

Sequences

Amino acid sequence

Length: 471

>Phmamm.CG.MTP2014.S337.g07466.01.p
MEGPAPDGDANTLKRSNRQKKKKKFFDDDASESVKPVLKVKLKAMKPKEKQINVVDTEEE
KPPTPENVEEPVDDLVDDEEKWLQALEKGELDDNGDLPKAKDPLLMTARQRAKMDRIGAP
SLIDEIPATPKEELSEEAKKKRDEKNKRRKLQAVKRAEENKKQTIERLVQSNKLNKDQSK
GSGGKHSGIAMIKYTNTAEAAAMSFPEGFDYPLKAKRISAPPPTRTCAICGERRKRKKEG
RAAHIRAKRAKKLIGLKAKLYNKQRHHEKIQMKKTIKMHEKRNTKQKDDEKTPDGAVPAY
LLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQSEAEVFRVITTGKRKKKAWKRM
CTKVCHVPDNFTRKPPKYERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSTMYT
SLGVITKGTVIEVNVSELGLVTQGGKVIWGKFAQVTNNPENDGCINAVLLV

Nucleotide sequence

Length: 1,416

>Phmamm.CG.MTP2014.S337.g07466.01.t
ATGGAAGGGCCAGCACCTGATGGAGATGCAAACACTTTGAAAAGGTCTAATCGCCAAAAG
AAGAAAAAGAAATTCTTTGATGATGATGCATCAGAATCTGTAAAGCCAGTTCTTAAAGTC
AAGCTTAAAGCTATGAAGCCAAAGGAAAAACAGATTAATGTAGTTGATACTGAAGAGGAA
AAACCACCAACCCCTGAGAATGTGGAAGAACCTGTTGATGATCTAGTGGATGATGAAGAA
AAATGGCTACAAGCACTTGAGAAGGGAGAGTTAGATGACAATGGTGACCTACCAAAAGCC
AAAGACCCACTGCTGATGACTGCCAGGCAGAGGGCAAAGATGGATAGAATAGGTGCACCC
AGCCTGATAGACGAGATCCCTGCAACACCCAAAGAAGAGCTAAGTGAAGAAGCTAAAAAG
AAAAGGGATGAGAAAAACAAACGGCGAAAGCTGCAGGCCGTGAAGCGTGCAGAAGAAAAC
AAGAAACAAACAATAGAGCGCCTTGTGCAAAGCAATAAACTGAACAAAGATCAAAGCAAA
GGTTCTGGGGGAAAGCATAGTGGTATTGCTATGATCAAATACACAAACACGGCTGAAGCA
GCCGCAATGTCTTTTCCAGAAGGTTTTGACTACCCTTTAAAAGCAAAAAGAATTTCAGCA
CCCCCACCTACAAGGACGTGTGCCATATGCGGAGAACGTAGAAAACGGAAGAAGGAAGGT
CGGGCAGCACACATTCGGGCAAAGAGAGCCAAGAAGTTAATTGGTCTTAAAGCTAAACTG
TACAATAAACAGAGACATCATGAAAAGATTCAAATGAAAAAGACTATTAAGATGCATGAA
AAACGAAACACAAAACAAAAAGATGATGAGAAAACACCAGATGGAGCCGTTCCTGCATAT
CTTCTGGATCGTGAAGGGCAGAGCAGAGCCAAAGTATTGTCAAATATGATCAAACAAAAA
AGAAAGGAAAAAGCTGGGAAATGGGAAGTCCCCCTGCCTAAAGTGCGAGCTCAAAGTGAA
GCTGAAGTATTCAGAGTTATTACAACTGGAAAAAGAAAAAAAAAAGCGTGGAAGAGAATG
TGTACAAAAGTGTGTCATGTTCCTGATAACTTTACAAGGAAACCCCCAAAATATGAAAGA
TTTATTCGTCCTATGGCACTGCGGTTCAAAAAAGCACATGTAACACATCCAGAATTAAAA
GCTACCTTTTGTTTGCCAATTATCGGAGTAAAAAAGAACCCATCATCTACAATGTACACT
TCACTTGGAGTAATCACAAAAGGAACTGTAATTGAAGTTAATGTCAGTGAATTAGGACTT
GTCACCCAAGGAGGAAAAGTGATCTGGGGAAAGTTTGCTCAAGTGACGAACAATCCAGAA
AATGATGGATGCATTAATGCAGTTTTGTTGGTTTAG

InterProScan

SMART
INO80B_C (IPR006880) - T[137-209] 5.2E-8
Pfam
INO80B_C (IPR006880) - T[137-207] 1.2E-5
Pfam
Ribosomal_S8e/biogenesis_NSA2 (IPR022309) - T[244-470] 1.1E-48

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NSA2_HUMAN 89.076 % 437 6.29E-154
IN80B_HUMAN 39.86 % 80.5 1.44E-16