- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'Phmamm.CG.MTP2014.S9...' >
- Transcript 'Moocci.CG.ELv1_2.S54...' >
- Transcript 'Mooccu.CG.ELv1_2.S63...' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S332.g07383.01.t
Possible name(s)
NCOA7; OXR1; TLDC2
Gene model
Location
S332 [25,885 / 41,032]
Amino acid sequence
Length: 679
>Phmamm.CG.MTP2014.S332.g07383.01.p
HHSMQKQKPNGCQEYQVQSRDTLRSIAVNYDTTTSKIMKINRLSSTLIFPGQVLYVPIGT
DDSVPDGASPPISSSFDGDFSFLKPLSVSPTETMDKLNNLSYKLENFVDLSSQDDMKLSN
PLETVCTKSQSTSSYDVVNDIKEGRKLSERDRIISCDSNASETFEENFLKMKVCYLTPEQ
ELVEGVLLITPTSLMFDPNPLDPLAVAFGCDKFGIMCNMSSIISATMFNDKVDILKYRNI
NSRHSSFSNNSTGKNSQEVSSATEQSHVEDLIKLDEHVVTTEPVSLSEQCQSPDEVDKTD
PLSDLHSNNENAEDKLMKEFPLLHHLAKTVEGMIPGSDTTIDLDDDFPSAQTRDSMFFCV
RSKLPMMKTFSRNNNFEVKSDEEPEQKPDEESLKQSWFKVHKSRSDQLLAFFMQWTPDPY
AVDFAEQRGFVITDPLATDGNVQTKPDASLDEKRGRSSTNTSLEFVENFYSDAQIEKEWE
IVSIEEARRRSTLNALELANDDNSLMPELLDTSNLLNDSSVLSLCKNLPARCVGCPWKLL
YSTFEHGMSLRTLYRKMNRLSEDSPVAIIVQDTEGHIFGAVSSCPPQVSEHFKGSGEAFL
FTLEPTLQIYNWSGENMFFLKGDTDSLTIGGGDGLSGLWLDSDLCHGSSHTCLTFNNAVL
SSTEDFFIQGVEVWGFRDT
Nucleotide sequence
Length: 2,887
>Phmamm.CG.MTP2014.S332.g07383.01.t
CATCACTCAATGCAAAAACAGAAACCAAATGGATGCCAAGAATACCAGGTGCAGAGCCGT
GACACTCTTCGAAGTATTGCAGTTAACTATGATACTACAACATCAAAGATTATGAAAATC
AACAGACTATCATCTACCTTAATATTTCCAGGACAGGTTTTGTATGTGCCCATTGGTACT
GATGATTCTGTTCCTGATGGTGCAAGTCCACCAATATCCTCATCGTTTGATGGTGACTTC
TCATTTCTTAAACCTCTTTCAGTTTCTCCAACTGAAACAATGGACAAACTAAATAATCTT
AGCTATAAATTGGAAAACTTTGTTGATCTTTCATCACAAGATGATATGAAATTGAGCAAT
CCTCTTGAAACTGTGTGTACAAAATCTCAATCAACATCTTCCTATGATGTTGTCAATGAT
ATAAAAGAAGGACGAAAGTTATCAGAAAGAGACCGAATTATCTCCTGCGATTCCAATGCA
TCAGAAACATTTGAAGAGAATTTTCTGAAAATGAAAGTGTGTTACCTAACACCGGAACAG
GAGCTGGTTGAAGGTGTTTTATTGATCACACCAACATCACTGATGTTTGACCCGAACCCA
CTTGACCCATTGGCAGTTGCATTTGGTTGTGACAAGTTTGGTATCATGTGCAACATGTCA
TCAATAATTAGTGCTACTATGTTTAATGATAAGGTGGACATTCTTAAGTACAGAAATATC
AATTCTCGTCACAGCAGCTTTAGCAACAATTCAACTGGCAAAAATAGTCAAGAGGTTAGT
TCTGCAACAGAACAATCACATGTTGAGGACTTGATAAAACTAGATGAGCATGTGGTCACA
ACTGAACCAGTGTCTTTGTCTGAACAATGTCAATCCCCTGACGAAGTTGACAAAACTGAT
CCTCTTTCTGACCTACATTCCAACAATGAAAATGCGGAGGACAAACTTATGAAAGAATTT
CCCCTTCTGCATCACTTAGCGAAGACTGTGGAAGGAATGATTCCTGGAAGTGACACCACA
ATTGACTTAGATGATGATTTTCCTTCTGCACAAACAAGAGACAGTATGTTTTTTTGTGTT
CGTTCAAAACTACCCATGATGAAAACGTTTTCGAGAAATAACAACTTTGAAGTGAAGAGT
GATGAAGAACCTGAACAAAAACCAGACGAAGAATCGTTAAAGCAAAGCTGGTTTAAAGTA
CACAAAAGCAGATCTGACCAGCTTCTGGCCTTCTTCATGCAATGGACTCCCGACCCTTAC
GCCGTGGACTTTGCCGAGCAGCGAGGTTTCGTGATCACTGATCCACTCGCTACTGATGGC
AATGTTCAAACAAAACCTGATGCATCTCTGGACGAGAAACGCGGCAGAAGCTCGACCAAC
ACTTCACTCGAATTTGTGGAGAATTTCTACAGCGATGCGCAAATAGAGAAGGAGTGGGAG
ATCGTGAGCATTGAAGAAGCGAGAAGGCGATCAACGTTGAACGCACTTGAACTAGCAAAC
GATGACAATTCATTAATGCCTGAACTCCTTGATACAAGTAACCTCCTCAACGACTCCAGC
GTGTTATCGTTATGCAAAAACCTTCCCGCTCGATGTGTGGGATGCCCGTGGAAGCTTCTC
TACAGCACCTTCGAACACGGGATGAGTCTTCGTACTTTGTACCGCAAAATGAACAGACTT
TCCGAAGATTCGCCAGTTGCCATCATTGTACAAGACACCGAAGGCCACATTTTCGGAGCA
GTTTCGTCCTGCCCTCCCCAGGTCAGCGAACACTTTAAAGGCTCAGGAGAAGCGTTTCTT
TTTACTTTAGAACCGACGCTGCAAATTTACAACTGGAGTGGAGAGAACATGTTTTTTCTC
AAAGGCGATACGGATTCGTTAACGATTGGCGGCGGAGACGGTTTGTCCGGTTTATGGCTG
GACAGTGATCTTTGTCACGGCAGCAGCCACACATGTCTTACTTTTAACAACGCCGTCCTA
TCATCAACCGAAGATTTCTTTATCCAAGGCGTCGAGGTTTGGGGATTCCGAGACACGTGA
TCACGCCTTGTGACGTCACAACTGTTCAGAGTCGACGCGACGGTTATTTCCCTTCATGAG
ATGCTTGTGTCAATTTCGTGTTGGTGGATGCTCTTGCCTGGTAACATAGTGGCAATATAC
TATGCCCCGTGACAAGGGGTGAGTAAATGGAATACGTAAACTATATATATGTGTTGAAGT
TATGCTGTGTATGTTCCGCGAAGCGTGCGCATATTGCCTAGTATTTCTATACCTTATATG
TGTATTGCATTCAAAGTCACCCATTTGCGTGAAAACGTGATGTAATAGTATGTTTCAGCC
ATCTTTGCGGTCATTGGGTCAATTTGTGACAGATAAATCATTTTGCCAAATTTAATGACA
AATATGTGCAAGTTAACCTCACCCCAGGACATGTACACAAAATATATTTTGAATTTCTTG
TGAAAGTTTTTCACGACTTCTTTTCGAATTATACCCGCAAATACTGGTTTTGTTCATTGG
AATTTCTTTTTGCATTGTATCCCTCAAACAGATATTTATTAATGTACACTCCTTTAGGTA
TGTAGCATTGGGGGATGGCAGCTTTTGTTCCACTGTGTGCTTCTGTATTGAGCCATACCC
CCTGTGCATGGATCCTACCGTTTCAGTTCTACGTACATCCTGCAAAAAAACGTTTTTGTT
CTCCCTATCCCCATTACTTGTGTGCAATGAACTTATCTAACCACGTCCGCCCATAGTAAG
TGTGACATGCAAAAAACTCACACAGCTGCATCCCCAGTTTTACTTTTCACGGTTGCTGGA
TTGTTTTGTGCAATGCGCTATTGATACCGCTTATGGTAAACAGAGCAATGTGGACTATTC
ACATGGC
| Gene3D |
LysM_dom_sf (IPR036779) - T[1-65] 3.7E-15 |
| CDD |
LysM_dom (IPR018392) - T[13-56] 4.35891E-11 |
| ProSiteProfiles |
LysM_dom (IPR018392) - T[13-56] 12.888 |
| SMART |
LysM_dom (IPR018392) - T[14-57] 1.4E-11 |
| Pfam |
LysM_dom (IPR018392) - T[15-57] 7.4E-12 |
| SMART |
TLDc_dom (IPR006571) - T[513-677] 1.7E-55 |
| Pfam |
TLDc_dom (IPR006571) - T[539-676] 4.8E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OXR1_HUMAN | 36.676 % | 233 | 6.44E-66 |
| NCOA7_HUMAN | 39.412 % | 237 | 3.71E-67 |
| TLDC2_HUMAN | 45.562 % | 160 | 2.46E-45 |