- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S332.g07381.01.t
Possible name(s)
CTRB1; CTRB2; MALRD1
Gene model
Location
S332 [551 / 14,113]
Amino acid sequence
Length: 1,265
>Phmamm.CG.MTP2014.S332.g07381.01.p
MHGADVKDFNIYTKGVTSMKLTTIAHLSGAWSVVTTSQQRVFGRDGDWWNEQQTEFETTE
AVQIILEATRGENYRGDIAVDDISLDFSSCPNKMIDCNFENNTCGWTQMSGDEFNWMPNT
GKTPTANTGPSSDHTTGSIGGRYMYAEASWPREEGDKAQFLSPPINCTRSETPIFRFWYY
MHGEGVGPLRVYFVDADEFTNFTEPAWALSGEQGAVWKHAKIPVPEIIYSRRFRVVMEAE
RKNYRGDAAIDDVSLLNCYPVVRNQQIAPATNKPVDEDSFTIYDISTLPPATQSVELSAE
DAKLPGGLSCTFDVDLCSWKSDSNGHFNWTLNEGKTPSLKTGPVHDHTTGAGWYLYIEAS
SPRLSGQTAILRSPVIPSSFRVCLQFYYHMFGATMGKLEVLTTRAGSHRFNKIWKVGGQQ
SQNERDWLFAEVDISLPFNYQVIFRGSVGHDFYSDMAIDDIAVKLSACRRPQTPGTLATL
PPTSPAGTSPAEFVKVVDTIACNFDVLTFCRWKQLGSDQFDWTISDKGHTPSPNTGPNSD
HTGGGQFAYIEASRPRALHDKAKLESPHFNVTEPACFSMWYHMFGNGTGSLSVYAMYSVN
TSGENTQGIEKITKSLWRRTGQQGDSWNQIYGNLIDGVDMKLVIEASTGEGFRGDIAIDD
IKILPGECPIFNCTFDTGFCGWTQDTKQDDFDWTRANNGTSTLNTGPEADHTRKVINGKG
HFVYIETSNPREKGDIARLISPIVMPDLNPNKCLTFWYHSFGSTIGELNIYKKSPDHKDA
YLKTPEWSLNTDEGDQWVFASIDIEDNHSYQIVVEGMRGDDGMGDIAIDDINLADGLCHT
CCGDKFFKCGNGFCVSKHQRCDDKDDCGDGSDESGCQGCGVAKIPPLTSSVFGKATSLGS
IGVFQSPIGAQRNSSVERARLFADIGLIEVAQIPHFQLKRIRMPNLKLSKLAQPNTGIRS
EKTRLVPIRGLRPKTEVVSVRKKRATSSTSGPATRLPRKGIMHRMKRSALVRITGGGHAV
PHSWPWQAAYYVYNSKTETHHFCGGTLIDRYWMLTAAHCPLQGDDHSVVVGAHDLYEVDG
TEQELKVDMVYLNKVFQFSEDLVGDIALVKFRYPARTSKAVQPACLLKNTDPRFSSGYNC
AITGWGRINSDAPGVEQVLRQGEVPIIGHELCQTKFLSDYNLHDSMICAGATGANTCRLR
GKTLFLKQGDSGGPLVCKRDDKTYLIGITSWGDTKCKGDIPGVYTRVQSYMDWIEKIINS
EQCQP
Nucleotide sequence
Length: 3,798
>Phmamm.CG.MTP2014.S332.g07381.01.t
ATGCATGGGGCTGACGTCAAGGACTTCAACATCTACACGAAAGGCGTCACGTCCATGAAA
TTGACGACAATCGCTCATTTGTCGGGTGCTTGGTCTGTTGTCACCACTTCACAGCAACGA
GTCTTTGGGCGAGATGGCGATTGGTGGAATGAACAACAAACCGAATTTGAAACAACGGAA
GCCGTCCAGATTATTTTGGAGGCAACGCGAGGAGAAAACTACAGGGGAGATATCGCTGTG
GACGACATCAGCCTGGACTTCTCATCTTGTCCTAACAAAATGATTGATTGCAATTTTGAG
AACAACACTTGTGGATGGACGCAGATGTCTGGTGATGAGTTTAACTGGATGCCAAATACC
GGGAAAACTCCCACCGCCAACACTGGACCTTCATCTGATCACACAACTGGATCAATCGGT
GGACGCTATATGTACGCCGAAGCATCTTGGCCGAGAGAAGAAGGTGACAAAGCACAATTT
TTATCCCCTCCTATTAACTGTACCAGAAGTGAAACACCCATCTTTCGATTTTGGTATTAC
ATGCACGGGGAAGGCGTTGGCCCACTGCGGGTTTACTTTGTTGATGCTGACGAGTTTACT
AACTTCACTGAACCAGCCTGGGCCTTGAGCGGAGAACAGGGCGCCGTCTGGAAACACGCA
AAGATACCTGTACCGGAAATAATCTATTCGCGTCGGTTTCGAGTGGTGATGGAGGCAGAG
AGAAAGAATTATCGAGGTGATGCCGCTATTGACGACGTGTCGCTGCTCAATTGTTATCCA
GTCGTGAGGAATCAGCAAATCGCCCCAGCCACGAATAAACCGGTAGATGAAGATTCGTTC
ACCATATATGATATCTCCACTTTACCACCAGCAACACAGAGTGTGGAGCTGAGTGCAGAG
GATGCGAAATTGCCAGGTGGTCTTAGCTGCACGTTTGATGTGGATCTGTGTAGCTGGAAA
AGTGACTCAAATGGACATTTTAACTGGACCCTCAACGAAGGCAAAACTCCATCGCTCAAG
ACCGGCCCCGTTCATGACCACACAACAGGAGCCGGGTGGTACCTCTACATCGAAGCCTCT
TCGCCACGACTTTCCGGCCAAACAGCAATCTTACGCAGCCCCGTGATCCCATCATCTTTT
CGAGTGTGCTTACAGTTCTACTATCACATGTTCGGCGCCACTATGGGAAAACTGGAAGTT
CTGACGACTCGCGCGGGCAGCCACCGTTTCAACAAGATATGGAAGGTTGGCGGACAGCAA
AGCCAGAATGAACGTGACTGGCTGTTCGCTGAGGTTGATATCAGTCTGCCTTTCAACTAT
CAAGTTATATTTCGCGGATCTGTGGGTCATGATTTTTACTCCGACATGGCAATTGATGAT
ATTGCTGTGAAACTCTCGGCTTGTCGTCGACCGCAAACCCCCGGTACATTGGCTACTCTC
CCACCAACTTCACCAGCTGGTACAAGCCCAGCAGAGTTTGTAAAAGTTGTGGACACTATC
GCATGCAACTTTGATGTTTTGACGTTTTGTCGGTGGAAACAATTGGGCAGCGATCAATTC
GACTGGACAATATCAGACAAAGGTCACACGCCATCTCCCAATACTGGACCGAATTCGGAC
CACACTGGAGGAGGACAATTTGCTTACATCGAAGCTTCGCGTCCACGTGCTCTGCATGAC
AAGGCAAAACTGGAAAGTCCACATTTCAATGTTACTGAGCCGGCTTGTTTTTCCATGTGG
TATCATATGTTTGGAAATGGCACGGGTTCGCTCTCGGTATACGCAATGTATTCTGTGAAC
ACCAGTGGTGAAAACACACAGGGAATTGAAAAGATAACAAAGAGTTTGTGGCGTAGAACT
GGACAGCAAGGCGACTCTTGGAATCAAATATATGGAAATCTAATAGATGGTGTGGACATG
AAGTTAGTTATTGAAGCCTCAACGGGAGAAGGGTTTCGTGGCGATATTGCGATCGACGAC
ATTAAAATATTACCGGGAGAATGCCCGATTTTTAACTGCACCTTTGACACTGGATTCTGC
GGATGGACGCAAGACACCAAACAGGACGATTTTGATTGGACTCGTGCAAATAACGGCACA
TCGACATTAAATACTGGGCCAGAAGCTGATCACACAAGAAAAGTCATAAATGGAAAAGGT
CACTTTGTTTACATCGAAACTTCCAATCCAAGGGAGAAGGGAGACATAGCAAGATTGATT
AGCCCTATAGTGATGCCAGATCTCAATCCAAATAAATGTCTCACATTTTGGTACCATTCG
TTTGGAAGCACAATTGGGGAGCTAAACATATACAAGAAGTCTCCGGATCACAAGGACGCC
TATTTAAAAACTCCTGAATGGTCGCTGAACACTGACGAGGGCGATCAGTGGGTTTTTGCC
AGCATAGATATCGAAGATAATCACTCGTACCAGATCGTTGTTGAGGGAATGCGAGGTGAT
GACGGCATGGGTGACATCGCTATTGACGACATTAACCTCGCTGATGGGTTGTGCCACACT
TGTTGCGGGGACAAATTTTTCAAGTGCGGAAACGGGTTTTGCGTTTCTAAGCATCAACGT
TGTGATGATAAAGATGATTGTGGAGACGGAAGCGACGAATCGGGTTGCCAAGGTTGCGGA
GTAGCAAAGATACCACCACTAACCAGTTCGGTGTTTGGAAAGGCAACGTCGTTGGGATCA
ATAGGAGTCTTTCAAAGTCCTATCGGCGCGCAGCGAAACTCAAGCGTGGAACGTGCTCGT
TTGTTCGCCGACATTGGGCTAATCGAAGTTGCCCAAATTCCTCACTTCCAGTTAAAGCGA
ATCCGAATGCCCAATCTTAAACTGTCAAAACTTGCCCAACCAAACACAGGAATCAGAAGT
GAAAAAACTCGTTTAGTTCCAATTAGAGGGCTTAGGCCAAAAACAGAAGTTGTGTCCGTC
AGGAAGAAAAGGGCAACATCCTCTACTTCAGGACCAGCAACTCGGCTGCCAAGGAAAGGT
ATCATGCATAGAATGAAACGAAGTGCATTGGTCCGTATCACAGGTGGAGGGCACGCGGTA
CCACATAGTTGGCCCTGGCAGGCCGCTTACTACGTGTACAACTCAAAAACGGAGACGCAT
CATTTCTGTGGTGGAACTCTCATTGATAGATACTGGATGCTTACAGCAGCTCATTGCCCT
CTTCAAGGGGACGACCATTCTGTAGTGGTGGGTGCTCATGATTTGTATGAAGTGGACGGA
ACCGAACAAGAGCTAAAAGTCGACATGGTTTACTTAAACAAGGTCTTCCAGTTTTCAGAA
GATCTGGTCGGAGACATAGCGTTGGTTAAATTCAGATACCCAGCACGCACGTCCAAAGCT
GTTCAACCTGCCTGTTTGTTAAAAAACACAGATCCGCGTTTTTCGTCTGGATACAACTGT
GCTATTACTGGATGGGGACGAATCAATTCTGATGCTCCAGGTGTTGAACAAGTATTGCGA
CAGGGCGAGGTGCCTATTATTGGACACGAGTTATGTCAAACAAAGTTCTTGTCTGATTAC
AACTTGCATGATTCCATGATTTGTGCTGGAGCCACTGGAGCAAATACATGTCGGTTAAGA
GGTAAAACATTGTTTTTAAAACAGGGTGACTCTGGTGGTCCTCTTGTGTGCAAAAGAGAC
GATAAAACTTACCTTATTGGAATTACGAGCTGGGGCGACACCAAGTGTAAAGGAGACATT
CCTGGTGTTTACACAAGAGTGCAAAGTTACATGGACTGGATAGAAAAAATTATTAATTCG
GAGCAATGTCAGCCTTAA
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[33-90] 4.91E-6 - T[95-258] 1.58E-39 - T[307-468] 2.53E-41 - T[500-668] 1.28E-35 - T[668-838] 6.33E-40 |
| Pfam |
MAM_dom (IPR000998) - T[36-90] 2.0E-7 - T[97-257] 8.6E-37 - T[310-469] 1.2E-37 - T[502-669] 1.0E-34 - T[673-838] 3.0E-42 |
| ProSiteProfiles |
MAM_dom (IPR000998) - T[43-92] 11.922 - T[95-260] 30.807 - T[308-470] 30.156 - T[500-670] 29.602 - T[671-840] 38.442 |
| SMART |
MAM_dom (IPR000998) - T[92-260] 3.9E-32 - T[305-470] 2.9E-39 - T[497-670] 1.5E-26 - T[671-840] 1.7E-34 |
| CDD |
MAM_dom (IPR000998) - T[97-257] 3.88953E-43 - T[310-468] 2.25727E-44 - T[502-668] 1.33962E-38 - T[673-838] 9.68319E-47 |
| ProSitePatterns |
MAM_dom (IPR000998) - T[352-392] . |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[840-878] 7.6E-9 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[841-877] 12.738 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[841-877] 1.44E-8 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[842-876] 1.4E-5 |
| SUPERFAMILY |
Peptidase_S1_PA (IPR009003) - T[1005-1259] 3.35E-71 |
| SMART |
Trypsin_dom (IPR001254) - T[1012-1254] 2.8E-74 |
| CDD |
Trypsin_dom (IPR001254) - T[1013-1257] 1.28411E-72 |
| ProSiteProfiles |
Trypsin_dom (IPR001254) - T[1013-1259] 32.238 |
| Pfam |
Trypsin_dom (IPR001254) - T[1013-1254] 2.5E-56 |
| PRINTS |
Peptidase_S1A (IPR001314) - T[1044-1059] 1.1E-8 - T[1101-1115] 1.1E-8 - T[1204-1216] 1.1E-8 |
| ProSitePatterns |
TRYPSIN_HIS (IPR018114) - T[1054-1059] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MALR1_HUMAN | 29.176 % | 298 | 1.38E-82 |
| CTRB2_HUMAN | 38.583 % | 165 | 9.34E-46 |
| CTRB1_HUMAN | 39.442 % | 167 | 2.75E-46 |
