- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S327.g07317.01.t
Possible name(s)
PUF60; U2AF2
Gene model
Location
S327 [154,412 / 156,443]
Amino acid sequence
Length: 423
>Phmamm.CG.MTP2014.S327.g07317.01.p
MSNGMNYQEGMMPGMGMPPGGYNGEMPYGNLPGSEMKQEPPSKEERHGERSSSGRHRDRK
RSRDRERRKRSRSRDRGRRHRSRSRDKKRRSRSKERSERSKPKRKYRYWDVPPVGYEHVT
PLQYKAMQAAGQIPLVASSQVLGSVGGGAAETTLQVPVAGSQMTRQARRLYVGNIPFGVT
EDAMMEFFNNQMHVAGLSQAPGDPILAVQINLDKNFAFLEFRSVDETSQALAFDGINFMN
QSLKIRRPSDYKPLPGSADQPAVHLPGVISTVVQDSQHKIFVGGLPNYLGDDQVKELLTS
FGPLRAFNLVKDSATGLSKGYAFAEYVDYLITDQAIAGLNAMQLGEKKLIVQRASVGAKN
NPFGAILAPVTLQIPGMVQATGAGAPTSVLCLMNMVTPEELEDDDEYEDILEDIRDECNK
LGK
Nucleotide sequence
Length: 1,269
>Phmamm.CG.MTP2014.S327.g07317.01.t
ATGAGCAATGGAATGAACTACCAGGAAGGTATGATGCCAGGAATGGGTATGCCTCCTGGT
GGTTACAACGGAGAAATGCCATATGGAAACTTACCAGGCAGTGAAATGAAACAAGAACCA
CCATCCAAGGAGGAAAGACATGGTGAGCGCAGCAGTTCTGGAAGGCATCGCGACAGGAAG
CGTAGTCGAGATCGCGAACGAAGAAAGAGAAGCAGAAGTCGTGATAGGGGTCGAAGGCAC
CGTTCTCGTAGCAGAGACAAGAAGCGAAGATCCAGAAGCAAGGAGCGATCTGAACGAAGC
AAACCAAAAAGAAAATATCGCTATTGGGATGTTCCTCCAGTTGGCTACGAACATGTGACA
CCTCTCCAATACAAAGCGATGCAAGCTGCCGGACAGATTCCACTGGTTGCATCATCTCAA
GTCTTGGGCAGCGTGGGTGGTGGAGCTGCAGAAACTACACTTCAGGTCCCAGTTGCTGGT
AGTCAAATGACAAGGCAGGCAAGAAGACTCTATGTTGGAAACATTCCATTTGGAGTTACT
GAAGATGCTATGATGGAGTTTTTTAACAACCAAATGCATGTTGCTGGACTTTCACAAGCA
CCCGGTGATCCAATTTTGGCTGTACAAATAAACTTGGACAAAAATTTTGCATTTCTGGAG
TTCCGTTCGGTTGATGAAACATCACAAGCTCTTGCATTTGATGGCATAAACTTCATGAAT
CAGTCATTGAAGATCCGCAGGCCAAGTGATTACAAACCACTTCCAGGCAGTGCAGACCAA
CCCGCTGTGCATCTGCCAGGAGTTATCTCTACAGTGGTTCAAGATTCACAGCACAAAATT
TTTGTCGGAGGACTTCCAAACTATCTTGGTGATGATCAAGTAAAAGAGTTGCTGACTTCC
TTTGGCCCATTGAGAGCATTCAATCTTGTTAAGGACAGTGCCACGGGGTTGTCAAAGGGT
TATGCTTTTGCAGAGTATGTTGACTATTTGATTACAGATCAAGCAATAGCAGGTTTAAAT
GCAATGCAGCTTGGAGAGAAGAAGTTAATTGTACAGAGAGCTAGTGTTGGAGCAAAGAAT
AATCCATTTGGTGCCATCCTAGCACCTGTTACCTTGCAGATACCTGGTATGGTCCAAGCT
ACTGGTGCAGGAGCCCCTACTTCTGTGTTGTGTCTTATGAACATGGTTACTCCAGAAGAG
CTGGAAGATGATGATGAATATGAAGATATTCTTGAAGATATTAGAGATGAATGCAATAAG
CTTGGGAAG
| TIGRFAM |
U2AF_lg (IPR006529) - T[46-422] 2.0E-116 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[167-354] 6.29E-32 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[168-351] 2.6E-58 - T[254-329] 2.6E-58 - T[383-423] 5.3E-11 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[168-250] 13.464 - T[278-356] 14.607 |
| SMART |
RRM_dom (IPR000504) - T[169-246] 3.3E-10 - T[279-352] 6.6E-15 |
| Pfam |
RRM_dom (IPR000504) - T[170-243] 6.1E-6 - T[280-349] 1.5E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| U2AF2_HUMAN | 68.876 % | 456 | 8.21E-159 |