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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C12.325.v1...' > 
  2. Transcript 'KH2012:KH.C8.109.v1....' > 
  3. Transcript 'KH2012:KH.C6.37.v1.A...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S325.g07277.03.t

Possible name(s)

COX5B

Gene model

Phmamm.CG.MTP2014.S325.g07277

Location

S325 [105,664 / 108,709]

Sequences

Amino acid sequence

Length: 163

>Phmamm.CG.MTP2014.S325.g07277.03.p
FANNLNLFLTFCCEFGIMALRKFTQVALQSVFRTQSARAVHISVPRKAILEDKPWPDEGA
AVGYEKVVMDAAKVGEDPLEVFNRETPYPFQGAGTKDDPIVIPSRNKTRYVMTNPPNWEG
GPPVGTWVTLEEGGRCPATGKHYKLNYDPSDKWGINELDLFMH

Nucleotide sequence

Length: 1,862

>Phmamm.CG.MTP2014.S325.g07277.03.t
ATTTGCGAACAACCTAAATTTGTTTCTGACGTTCTGTTGTGAATTTGGCATTATGGCATT
GAGAAAGTTTACCCAGGTTGCTCTTCAATCAGTTTTCCGGACTCAAAGTGCCAGGGCTGT
CCACATCAGTGTTCCAAGGAAAGCTATTTTGGAAGACAAACCATGGCCTGATGAGGGTGC
AGCTGTGGGATATGAAAAAGTTGTGATGGATGCTGCAAAAGTTGGTGAAGATCCCCTGGA
GGTTTTCAACCGTGAAACACCATACCCCTTTCAGGGAGCTGGTACTAAAGATGATCCAAT
AGTTATTCCCTCTAGAAACAAGACGCGTTATGTCATGACTAACCCACCAAACTGGGAGGG
TGGACCACCTGTTGGCACATGGGTGACTTTGGAGGAAGGCGGACGCTGCCCTGCAACTGG
CAAACACTACAAGTTGAATTACGACCCAAGTGACAAATGGGGAATCAATGAACTTGACCT
TTTCATGCATTGAGAGACTATTTTGTTTTCAAATTTTCGATTATCATCCAGTGGTTCAAA
TGATCTTTTTGTTGAGAAATAAATTTCATGGTTAACAGATGTTTAGCTAATACCTAAAAT
AAAACATAGTAGACTTTGGCAGCATATGTTATTGAGCTTTGTATTCAATGGAGATTTGGA
GGAAAGTTTAAAACAGCTTGACACAAACCATTTTGCTGGAGTAGCAGTATACCAGTTACT
TTTAAGCCTTTGCTTCACTTAGTCTCACATTCAACCCATACCTTTTCTTAAATTGAAACT
GCAGTGCATACTGTAATGTAATCAACAATTTTTTTGCCATTTTACAGACAATCCCAAATA
CGTACCCATTTTACTGTTTAAAATCAAGTACAGTGCAGTAGTACAACAATATGTCAACAA
ACTACTGCAGGATACAATTTTAAGATGGATCTTTTAGGTTTGCATTAAGAAATGTCTTGT
TGTAACTAAAGTATCTCTGAGTACTGCAGATATACAATAGCAGATAATCGTAAATAAACT
ACAGGTACAGGTAGACATTCCACTTAAATAACTATGACAGTGATGTTGTCAAGAAAAAAA
GTGGCTGACTAAGTGTAATCTAAAAAAACATTGCCAACTTTTTTACAAAATATTAGTTGA
TCACGTTTTGTCAGTACATGATTTGACCAGAGGTATTGAAGTCAGGTAACATGGGTGCAA
ACTGAATAAGAAGTAAAACAAATGTTTGCAGATTCATCAACAGTCTAAGTTCATGTGACA
ACAAATATGGTTATTAGGTCTAATGAGACGGATATATCAAGAGAATGCAAAACCCATTTT
CCTAGTATTTAAGATCGTGACATGCACAGATAAATTATACAAACAATTTACTGCTCATTG
CTGCGGGGGGGGGGTATCAACAGTCTAAGTTCATGTGACAACAAATATGGTTATTAGGAC
TAATGACACGGATATATCAAGAGAATGCAAAACCCATTTTCCTAGTATTTAAGACTGTGA
CATGCACAGATAAATTATACAAACAATTTACTGCTCATTGCTGCATAAAATGATTTTATC
CAAGCATTTACCTTTGATAAAATTAAAAAATGGGCTTAAAACTTGTTTAGACTTTTAACC
TTTAACACTAAGCAAGCCCTAGTAGAACAAATTAAAAATACTATTGCAAGATAAAAAATC
GGAACCGAATAATAAGTAATACACAAACAACAGCAAATTACAAAAAAACAATTCAGTACA
GTATAAAATCAATTCTGTTTATTTCTGTCATCGGCATCGATGGTTGCCAATCTGACAGAA
GCATCCACAAGATGTATTAAGCTGATAAAAGCTTTGACAATCATTATTGGAGTGGAGATG
TA

InterProScan

ProSiteProfiles
Cyt_c_oxidase_su5b (IPR002124) - T[45-152] 10.599
Gene3D
Cyt_c_oxidase_su5b_sf (IPR036972) - T[52-149] 1.8E-9
ProDom
Cyt_c_oxidase_su5b (IPR002124) - T[57-145] 6.0E-7
Pfam
Cyt_c_oxidase_su5b (IPR002124) - T[63-147] 2.4E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value