- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S316.g07149.01.t
Possible name(s)
ALOX12B; ALOX5
Gene model
Location
S316 [103,870 / 111,022]
Amino acid sequence
Length: 651
>Phmamm.CG.MTP2014.S316.g07149.01.p
MGNACVNPTDHETDAEYKFEIKTSHAYREAGTSLLSTVHIDLVGENGSSTGFHELDNSFW
PDFERGSRCYFKLTMRHVGLPNILRLSHVSNKVDIFLSTEVENSHMDDEWLCEDIVVELG
DSKRHFPVYDWVEDKIVQVTSGAVLPQNVTSKYVKSMRKHEIEQSKARYAWIVRPSRDDI
GWGMPRYMNASDPKELPLRLTRDAARQDDKDKSELSSIFELVRAKLLTITNPIKELDDYK
QLEEVFGNVKQHGSGFLEDWKTDAGMGRQMLNGINPLAMRKCSSIPDRFDVTNDDVSQYL
REGKTLDEEIEAGRVYIADYVEYVEGVDRTEGNVCCDSRALFYVNDNKDFMPIAIQLVPG
DRDYLFTPADSPEDWMLAKMHFRVAYGNIHEVDKCLPKYGSHKIIVGPATDMIRKSYKNF
HIDDLNIPKVLKKQGLDDPDQLPGYYYRDDSLKLYKLMEEYVQNFISHFYKTDKDVQQDY
ELQDWTKDVAKEGLGWADGDTKGMPEKMTSVTQLVEICTMVMYTCSAQHAAVNFGQFEMY
KFIPNSPGAMTRPPHKKGEANMGVIMNSLPQVDRALVFITVAYTLSRLTANETYIGEFPK
KFFDDEGVIKIQDEYTHKLKAFGNDIELRNRDLKHPYTYLLPSDIPNYIAI
Nucleotide sequence
Length: 1,956
>Phmamm.CG.MTP2014.S316.g07149.01.t
ATGGGAAACGCTTGCGTAAATCCAACTGATCATGAGACAGACGCTGAATACAAGTTTGAA
ATTAAGACATCACACGCGTATCGAGAAGCTGGCACAAGTCTGCTTTCTACAGTACATATT
GACTTGGTTGGAGAGAATGGCTCTTCGACCGGATTCCATGAGCTTGACAACTCGTTTTGG
CCTGACTTTGAACGTGGCAGTCGTTGCTACTTCAAATTGACGATGAGACATGTCGGCCTG
CCAAACATCTTAAGGCTAAGCCATGTATCAAACAAAGTGGACATTTTCTTGTCCACAGAG
GTTGAAAATTCGCATATGGATGACGAATGGTTGTGTGAAGATATTGTTGTAGAGCTGGGA
GACAGCAAAAGGCATTTTCCGGTGTACGACTGGGTGGAGGACAAAATCGTTCAAGTAACT
TCAGGAGCTGTCTTGCCTCAAAACGTCACTTCAAAGTACGTAAAATCGATGCGGAAACAC
GAAATCGAGCAGAGCAAGGCTCGCTACGCTTGGATAGTTCGTCCGTCACGTGACGACATC
GGCTGGGGGATGCCCCGTTACATGAACGCGTCGGACCCGAAAGAGTTGCCCTTGAGGTTG
ACGAGAGACGCAGCAAGGCAAGATGATAAAGACAAATCCGAACTTAGCTCAATTTTTGAA
CTTGTACGGGCTAAACTGCTGACTATTACGAACCCGATCAAAGAGCTTGACGATTATAAA
CAGCTTGAAGAAGTTTTTGGCAACGTTAAACAGCACGGTTCTGGCTTTCTAGAAGACTGG
AAAACAGACGCAGGCATGGGTCGGCAAATGCTTAATGGCATCAACCCTCTCGCCATGCGC
AAGTGCAGTTCTATTCCCGACAGATTTGACGTCACTAATGATGACGTCAGTCAGTATCTT
CGTGAGGGAAAAACCCTTGACGAAGAAATTGAGGCTGGCCGCGTGTACATCGCAGACTAC
GTTGAATACGTCGAAGGGGTTGATAGAACTGAGGGCAATGTATGCTGCGATTCAAGGGCT
TTGTTTTACGTAAACGACAACAAGGACTTTATGCCGATCGCTATCCAGCTCGTTCCAGGA
GACAGAGATTATCTTTTTACTCCTGCTGACAGCCCCGAAGACTGGATGCTGGCGAAGATG
CATTTTCGCGTTGCTTATGGCAACATACATGAGGTAGATAAGTGTTTACCCAAATACGGG
TCGCATAAAATTATTGTGGGTCCTGCCACAGACATGATCAGAAAATCGTACAAGAACTTC
CACATCGACGATTTGAATATTCCCAAGGTTCTAAAGAAACAAGGTCTTGATGATCCTGAT
CAACTCCCTGGATATTACTACCGGGATGACTCCCTGAAACTTTACAAACTGATGGAAGAA
TACGTTCAAAACTTCATCAGCCATTTCTACAAAACAGACAAGGACGTGCAACAAGATTAC
GAACTTCAGGATTGGACAAAAGATGTCGCTAAGGAAGGTTTAGGCTGGGCCGATGGCGAC
ACCAAGGGGATGCCAGAAAAAATGACCTCTGTGACACAACTGGTGGAGATTTGTACAATG
GTGATGTACACTTGCTCGGCTCAACACGCAGCTGTCAACTTCGGTCAATTCGAAATGTAC
AAGTTTATACCCAACTCTCCAGGTGCCATGACAAGGCCACCGCACAAGAAGGGAGAGGCA
AACATGGGAGTCATCATGAACAGTTTGCCACAAGTCGACCGGGCTCTTGTGTTCATCACT
GTCGCATATACGCTCTCAAGACTCACTGCAAACGAGACTTACATCGGAGAGTTTCCGAAG
AAGTTCTTTGACGATGAGGGGGTGATCAAAATCCAGGACGAATATACTCACAAACTGAAA
GCGTTCGGGAATGACATAGAACTGCGTAACAGAGACCTCAAGCATCCTTACACTTACCTG
CTTCCCTCAGATATCCCAAACTACATCGCTATTTAG
| Gene3D |
Catalase_core_sf (IPR037060) - T[3-141] 2.8E-13 |
| SUPERFAMILY |
PLAT/LH2_dom_sf (IPR036392) - T[13-134] 6.91E-9 |
| PANTHER |
LipOase (IPR000907) - T[14-392] 6.1E-139 - T[411-649] 6.1E-139 |
| ProSiteProfiles |
PLAT/LH2_dom (IPR001024) - T[15-146] 16.623 |
| Pfam |
PLAT/LH2_dom (IPR001024) - T[17-135] 6.0E-12 |
| ProSiteProfiles |
LipOase_C (IPR013819) - T[143-391] 25.125 - T[409-651] 64.251 |
| SUPERFAMILY |
LipOase_C_sf (IPR036226) - T[150-651] 3.53E-111 |
| Pfam |
LipOase_C (IPR013819) - T[259-391] 1.2E-9 - T[443-634] 2.0E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOX5_HUMAN | 26.657 % | 253 | 6.65E-75 |
| LX12B_HUMAN | 29.298 % | 254 | 3.42E-75 |
| LOXE3_HUMAN | 25.896 % | 217 | 1.78E-61 |