- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S316.g07146.01.t
Possible name(s)
ALOX12B; ALOX5
Gene model
Location
S316 [69,380 / 78,336]
Amino acid sequence
Length: 692
>Phmamm.CG.MTP2014.S316.g07146.01.p
MGAICCKPPDEPYRKVYYDIRIQTSDSYKNAGTRSVVFIDLINAGGVATGPQKLDNFFHF
DFCRGQLNHFRVYARDIGLPIIVRITLENRHHEDQWLCDTIAVGVNGDEVQFPVYDWIEE
EKEVTLGKGQLPQNVMNRYVQDLRKREIERNKVTFSWIPRPAEDSVGWGLPRYVDAATYA
DLPNMFKRDIVRAENFVEQGLGAGIQTIIDLVEGKIHPLEDLDSYKRLYTHRKLQRIREN
PYYLDDWNTDQGMGRQVMTGISPLAFKRCREIPEGFNVTNDDVEKFLEGSSLECEMGAGK
IYISDYSKVFQNIERNPAPTTNLPLNCPDAFGLFYVNSEAKFLPIAIQLIPGNRDYLFTP
QDSHEDWLLAKMYFRCAEGNMHEWIYHFLYTHSIMEPFAVSLFRCFPLSHPIYKLLRPHL
RTVSAINADARTDLIPATAAPNKALATSAIDLSRSVYKTFQFDDLVIPKVLKKNETENRD
LLPHYYYRDDALALWEIMTKYVTAVVKFYYKSEEDIKNDFELQDWANDVATEGVGWVDGN
TKGVPKEIKTYDQLVELCVVIIYTSSVQHAAVNFGQYETYKFAPNAPLGMRLAPHKKGEA
TKQLIMDSLPSLEMATIMVAVSFALSSFSPNDVFLGHYDKHLFTEEPIRHVQKTYLDDLN
QLEKEIDERNERIEPNPYNFLIPSRVPNYIAI
Nucleotide sequence
Length: 2,079
>Phmamm.CG.MTP2014.S316.g07146.01.t
ATGGGAGCGATATGCTGCAAGCCTCCTGATGAGCCATACAGGAAGGTTTACTACGACATA
AGAATACAGACATCGGACAGCTATAAGAATGCTGGAACTCGATCTGTTGTGTTCATTGAT
TTGATCAACGCGGGTGGTGTAGCTACGGGTCCCCAAAAACTCGACAACTTTTTTCACTTC
GATTTTTGCCGAGGACAACTTAACCATTTCCGGGTGTATGCGAGAGACATTGGATTGCCG
ATCATTGTACGAATAACTTTGGAAAACCGGCACCACGAAGACCAGTGGTTGTGTGATACA
ATAGCTGTGGGTGTTAACGGTGACGAAGTTCAATTCCCAGTCTATGATTGGATTGAAGAG
GAAAAGGAAGTAACATTGGGAAAAGGTCAGTTGCCCCAGAACGTCATGAACCGCTATGTG
CAAGATCTGCGCAAACGGGAAATTGAACGCAACAAGGTTACCTTCAGTTGGATTCCGCGT
CCAGCAGAGGACAGTGTAGGATGGGGTCTGCCCCGTTATGTGGATGCAGCTACATATGCC
GATCTCCCGAACATGTTTAAGAGAGACATCGTCCGTGCAGAAAACTTTGTAGAACAAGGA
CTTGGTGCAGGAATTCAGACAATCATCGATCTGGTTGAAGGTAAAATTCATCCTTTGGAA
GATCTCGACTCATACAAACGCCTATACACGCACAGAAAGCTTCAACGCATTCGGGAAAAC
CCCTACTATCTAGATGACTGGAATACAGATCAAGGCATGGGACGGCAGGTCATGACCGGA
ATAAGTCCGCTGGCATTTAAGAGGTGTCGCGAAATTCCTGAAGGCTTTAACGTCACTAAT
GATGACGTAGAGAAGTTTCTAGAGGGGAGTTCCCTAGAGTGCGAAATGGGGGCAGGGAAG
ATTTACATCAGTGATTACAGCAAAGTCTTCCAAAACATCGAAAGAAATCCTGCCCCGACT
ACCAATCTGCCTTTAAACTGTCCCGACGCTTTCGGACTCTTCTACGTAAACTCAGAAGCG
AAATTTTTGCCGATAGCAATCCAGTTGATCCCGGGAAACAGAGATTATCTTTTTACGCCC
CAAGACAGCCACGAAGATTGGTTGCTTGCTAAGATGTATTTCCGATGCGCGGAGGGTAAT
ATGCACGAGTGGATTTATCACTTCCTCTACACTCACTCAATCATGGAGCCGTTCGCCGTG
TCGCTCTTTCGGTGTTTCCCCCTTTCCCACCCTATCTACAAGCTACTGCGCCCGCATTTG
CGCACAGTTTCTGCTATCAATGCTGACGCGAGGACAGATCTTATACCGGCAACAGCGGCA
CCCAATAAGGCTTTGGCAACTTCCGCAATTGATCTGAGTCGTTCAGTTTACAAGACGTTT
CAGTTTGACGACCTCGTGATTCCTAAAGTTCTGAAGAAGAACGAAACCGAAAACCGAGAT
CTTCTTCCCCATTATTATTACCGCGATGATGCTCTTGCATTGTGGGAGATTATGACAAAG
TACGTCACTGCCGTCGTCAAGTTCTACTACAAATCGGAAGAAGACATCAAGAACGATTTC
GAACTGCAAGATTGGGCGAACGATGTAGCTACCGAAGGTGTTGGATGGGTTGATGGAAAT
ACTAAAGGTGTGCCAAAGGAAATCAAGACCTACGATCAACTGGTCGAATTGTGTGTCGTC
ATTATCTACACCAGTTCGGTTCAACACGCTGCTGTCAATTTTGGTCAGTACGAGACCTAC
AAGTTTGCCCCGAATGCTCCCCTTGGAATGAGACTTGCTCCTCACAAAAAGGGAGAGGCA
ACCAAGCAACTGATTATGGACAGCCTTCCAAGTCTTGAAATGGCGACAATTATGGTGGCT
GTATCATTTGCTTTGTCATCATTTTCACCCAATGACGTATTTCTCGGTCATTATGACAAA
CATCTTTTCACGGAGGAACCTATTCGACATGTGCAGAAAACCTACTTAGACGACCTCAAT
CAACTTGAGAAAGAAATAGATGAACGCAACGAACGTATAGAACCTAACCCGTATAACTTT
CTTATACCAAGCCGAGTCCCAAACTACATCGCCATTTAA
| Gene3D |
Catalase_core_sf (IPR037060) - T[5-127] 4.5E-17 |
| PANTHER |
LipOase (IPR000907) - T[10-692] 3.0E-146 |
| SUPERFAMILY |
PLAT/LH2_dom_sf (IPR036392) - T[15-123] 2.3E-16 |
| ProSiteProfiles |
PLAT/LH2_dom (IPR001024) - T[16-132] 19.674 |
| SMART |
PLAT/LH2_dom (IPR001024) - T[16-129] 0.0013 |
| Pfam |
PLAT/LH2_dom (IPR001024) - T[18-122] 5.0E-13 |
| ProSiteProfiles |
LipOase_C (IPR013819) - T[129-692] 106.791 |
| SUPERFAMILY |
LipOase_C_sf (IPR036226) - T[134-692] 5.36E-128 |
| Pfam |
LipOase_C (IPR013819) - T[246-672] 4.6E-65 |
| PRINTS |
LipOase_C (IPR013819) - T[364-381] 7.6E-10 - T[382-399] 7.6E-10 - T[402-422] 7.6E-10 |
| ProSitePatterns |
LipOase_CS (IPR020834) - T[409-419] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOX5_HUMAN | 32.323 % | 346 | 9.96E-110 |
| LX12B_HUMAN | 30.748 % | 298 | 5.64E-91 |
| LOX12_HUMAN | 29.345 % | 265 | 3.0E-79 |