- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S316.g07144.01.t
Possible name(s)
ALOX12B; ALOX5
Gene model
Location
S316 [29,639 / 35,580]
Amino acid sequence
Length: 500
>Phmamm.CG.MTP2014.S316.g07144.01.p
MPKPTDGDSGWGFPRYVKGANSLQLTRIFQQDQVKSTQSEGAVLSGVAGSTFDTIKSIMS
PIEELKDYHSLYKHESMTRNDPMNLDDWFSDQSTGRQTLNGIVPLSFKRCTSLPANCDII
NSDVNKILGADKTLDGEMEAGKIYISDFSEVFNGVERMEQLYCAQCIALFYVNDKGEFLP
LAIQLVPGSRDHLFTPNDSEEDWLLAKMYLRCAQSNMHQWIYNYLETHACMEPFGVALFR
CLPRAHPIYKLLRPHLRTVSCINNDARLALLPSEALPGKGIPTRTNDATLLPNYYYRDDA
LDHWEVMEKYASACIRHYYKCDEDVVNDYELKLWAKDVAKEGLGWQDHDTKGMPENLTSV
DQLIEICVILMFTSSVQHAAVNFGQFETYKFVPNAPLAMRLPPHKKGEANKQRISDSLPD
SLMAGSVLSLVFALSEYSPNEVYLGQFPERRFTEKIILDIQHNYMSDLQALEAKIKARNE
GLDYPYKFLLPSRVPNSIAI
Nucleotide sequence
Length: 1,503
>Phmamm.CG.MTP2014.S316.g07144.01.t
ATGCCAAAACCAACGGACGGTGACAGCGGCTGGGGATTTCCACGTTACGTCAAAGGTGCC
AACAGCCTTCAACTGACGAGAATATTTCAACAGGACCAAGTTAAATCTACTCAATCCGAG
GGCGCAGTTCTGTCTGGAGTAGCCGGATCTACATTTGACACCATCAAATCGATCATGTCG
CCTATTGAAGAGTTAAAGGATTACCACTCGTTGTACAAGCACGAATCCATGACACGTAAC
GACCCGATGAATTTGGATGATTGGTTTTCGGATCAAAGCACCGGTAGACAAACACTAAAC
GGAATCGTCCCACTCTCATTTAAACGTTGCACGTCACTGCCAGCAAACTGCGACATCATC
AACAGTGACGTAAATAAGATTCTTGGAGCAGACAAAACACTGGACGGTGAAATGGAGGCC
GGCAAAATCTACATTTCTGACTTCTCGGAAGTCTTCAACGGAGTCGAAAGAATGGAGCAA
CTTTACTGTGCTCAGTGCATTGCTCTCTTTTACGTAAACGACAAAGGTGAATTTCTGCCC
TTGGCAATTCAACTGGTTCCTGGAAGTCGTGATCACCTGTTCACTCCCAATGACAGTGAA
GAGGATTGGCTGCTTGCCAAGATGTACCTGCGGTGTGCACAGAGCAACATGCATCAGTGG
ATCTACAACTATTTGGAAACGCACGCTTGTATGGAACCGTTCGGTGTGGCTCTATTCCGA
TGTTTGCCACGTGCTCATCCGATTTACAAACTGCTGCGTCCCCACCTTCGTACAGTTTCG
TGCATCAACAATGACGCAAGACTTGCGCTCTTGCCCTCGGAGGCTCTTCCTGGAAAGGGG
ATTCCCACAAGAACGAACGATGCAACTCTTCTGCCTAACTACTATTACCGAGACGATGCA
CTTGACCACTGGGAGGTCATGGAGAAATATGCGAGTGCTTGTATCCGTCATTACTACAAG
TGTGATGAGGACGTTGTCAACGACTACGAGCTGAAACTTTGGGCAAAAGATGTCGCCAAA
GAGGGTCTCGGTTGGCAAGACCACGACACAAAGGGAATGCCAGAAAACCTGACTTCAGTC
GATCAACTGATTGAAATTTGTGTCATATTGATGTTCACAAGTTCTGTGCAACACGCTGCT
GTCAATTTTGGTCAGTTCGAGACTTACAAGTTCGTCCCAAATGCACCGCTTGCTATGCGT
CTTCCTCCACACAAAAAGGGAGAGGCAAACAAACAAAGGATTTCGGATAGCCTCCCAGAT
TCATTGATGGCTGGGTCTGTTCTATCATTGGTGTTTGCACTTTCTGAGTATTCACCCAAC
GAGGTTTACTTGGGACAATTTCCAGAGCGCCGCTTCACAGAAAAGATCATTCTCGACATC
CAACATAATTACATGAGCGATCTACAAGCGCTTGAGGCTAAGATAAAAGCTCGCAACGAG
GGTTTGGATTACCCTTACAAATTCCTACTGCCATCCAGAGTTCCAAACAGCATTGCTATT
TGA
| ProSiteProfiles |
LipOase_C (IPR013819) - T[1-500] 85.775 |
| PANTHER |
LipOase (IPR000907) - T[11-270] 1.6E-131 - T[286-499] 1.6E-131 |
| SUPERFAMILY |
LipOase_C_sf (IPR036226) - T[42-500] 1.28E-115 |
| Pfam |
LipOase_C (IPR013819) - T[84-274] 3.4E-27 - T[291-481] 3.7E-31 |
| PRINTS |
LipOase_C (IPR013819) - T[200-217] 1.5E-10 - T[218-235] 1.5E-10 - T[238-258] 1.5E-10 |
| ProSitePatterns |
LipOase_CS (IPR020834) - T[245-255] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOX5_HUMAN | 33.333 % | 270 | 6.03E-83 |
| LX12B_HUMAN | 35.333 % | 251 | 1.36E-75 |
| LOXE3_HUMAN | 33.333 % | 239 | 5.04E-71 |