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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3142.g17492.01.t

Possible name(s)

PLCH1

Gene model

Phmamm.CG.MTP2014.S3142.g17492

Location

S3142 [8,131 / 12,272]

Sequences

Amino acid sequence

Length: 172

>Phmamm.CG.MTP2014.S3142.g17492.01.p
MATNVIVKLLTAYAVLSFCGVKEIAGEITQYVQRTFDFLDTNHNGMFENDEAEDALEFLN
IPENENRRKFELCDADESGDLNIEEYAECSVISYGEIFTQADKNEDRMLSRQEMDNLIRG
FAKVVYTTMTFKQQQNEINKLGKGATGSYSLVDVVIVDTRLFELYLDERENL

Nucleotide sequence

Length: 519

>Phmamm.CG.MTP2014.S3142.g17492.01.t
ATGGCGACGAACGTTATTGTGAAGTTGCTTACTGCTTATGCGGTACTATCTTTTTGTGGA
GTTAAAGAAATAGCTGGCGAAATTACCCAATACGTCCAAAGGACATTTGACTTTCTTGAT
ACGAATCATAACGGAATGTTTGAAAATGACGAGGCTGAAGATGCTCTTGAATTTCTGAAT
ATTCCCGAAAATGAAAACAGAAGAAAGTTTGAGCTTTGTGATGCTGATGAAAGTGGAGAC
TTGAACATTGAAGAATATGCCGAGTGCTCAGTAATATCATATGGAGAAATTTTTACGCAA
GCTGACAAAAATGAAGATCGTATGCTGTCTAGACAAGAAATGGACAATTTAATTCGAGGC
TTTGCGAAAGTTGTGTACACCACTATGACATTCAAACAACAGCAAAACGAAATCAACAAA
TTGGGAAAAGGAGCAACTGGCAGCTACAGTTTGGTTGATGTTGTAATCGTAGACACCAGA
TTGTTTGAGCTGTATCTTGACGAGCGGGAAAATTTGTAA

InterProScan

ProSiteProfiles
EF_hand_dom (IPR002048) - T[27-62] 9.269 - T[96-124] 7.01
SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[30-141] 4.04E-13
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[102-114] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value