Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2.g00089.01.t

Possible name(s)

CCDC12

Gene model

Phmamm.CG.MTP2014.S2.g00089

Location

S2 [324,108 / 327,139]

Sequences

Amino acid sequence

Length: 169

>Phmamm.CG.MTP2014.S2.g00089.01.p
FVFFRNKVTMGDEKVGKMEDEAKKRREKLKALRRQRQEKGDADSKTTEKEALPVPELKLR
NYQPISEDLKEVPVKKAEAGDVEAHIKEQLEGQTATPTVTDDVDLLNLAPRKPDWDLKRD
IKSKMDKLERRTQRAIADLIRERLKESTQADPSHFAEVPDGPQGGYESD

Nucleotide sequence

Length: 1,128

>Phmamm.CG.MTP2014.S2.g00089.01.t
TTTGTATTTTTTAGGAACAAAGTCACCATGGGGGATGAAAAAGTAGGAAAAATGGAAGAC
GAGGCTAAAAAGCGACGGGAAAAATTGAAAGCACTTCGGCGACAACGCCAGGAAAAGGGA
GATGCGGATTCAAAGACGACGGAAAAAGAAGCTTTGCCTGTACCAGAGTTGAAACTGCGC
AATTATCAACCAATATCCGAAGATCTTAAAGAAGTTCCGGTTAAAAAAGCGGAGGCAGGC
GATGTTGAAGCACACATAAAGGAGCAACTTGAAGGCCAAACTGCTACTCCCACTGTTACT
GATGATGTTGATTTGTTAAACTTGGCTCCACGCAAACCTGACTGGGATTTGAAACGAGAT
ATCAAATCAAAAATGGACAAACTTGAAAGAAGAACACAGCGTGCAATTGCAGACTTAATA
AGGGAGAGATTAAAGGAATCCACACAAGCTGACCCTTCCCATTTTGCTGAAGTTCCTGAT
GGCCCACAGGGTGGCTATGAGTCTGATTGAGGATTTTGGAAAATTTAACTAGTATTTTGG
ATATCAAGTTTTGCAACCCCAGTATGTAATGGGCATGAAGCATTCACAACCAACTCTAGA
TTAACATTGCCAATCATGAATGCGAACGGAGGACCAAAAAATGTTTTTTTATTGATCAAC
TACAACTGGACAAATGTACACAAGCATTGACAATTCACTTAGATTTGAGACATCACTGGT
AAAGTTTCATCTGCTATTGCTTGTTTTCCAAAGACACCAGATAAACTCTTCGCTGTGACC
ACAAGCAACATGGTAGCCAGGATTCCTATGGTTGCACTCAATCCCAAAATAAGTGCTGCA
AGATAATGTGGTCTTGTGGTTAAATAAATTTCTATTTTTTAGAATTAGCAAGTTTGTTTG
ATAAATGGCCTACATGTTGAAATAAAACAAACAACGTTTACAGAAAGTAAGCAAAAGGTG
GACTTTAAAATAACAATTGAATACAGCTGGTACCAGGATTGTTGAGTTTTTTCCACAAAA
TGATGTTTTTTTTTTCATCTACAATAAAAGTAGCACTTTTCTTCAAAAAAAAGTTTCAAA
ATACCTTTTATAATGTGCTCAAATTTATTTTTCATCATAAAAGCATGT

InterProScan

PANTHER	mRNA_splic_Cwf18 (IPR013169) - T[12-151] 3.2E-42
Pfam	mRNA_splic_Cwf18 (IPR013169) - T[17-144] 4.4E-34

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CCD12_HUMAN	52.899 %	117	4.19E-34