- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2.g00084.02.t
Possible name(s)
AC008695.1; CNBD2; RAPGEF4
Gene model
Location
S2 [282,601 / 292,879]
Amino acid sequence
Length: 617
>Phmamm.CG.MTP2014.S2.g00084.02.p
MASLAGQHHQHTPARPAASPVPQINQPQVSPKHGEKVRHVKFAPSLSHGELKVEDHDSAK
QGNNEVQRRSFPNVHGATSTSPPARSRFHNVANNARRASMFARNYHPSNMIDRKITCIPP
LLRFRRAAKVIRLLCMVCIACKKSLTFSVSQNSWVALKEALLRESDVSKDQDNSKSKDLN
TDDPELTFDLSKFRRASKDHDEMPIKIKELLRKRPADRTSEEISNIMRSMQKLELFARYP
LNVQRRLCSKAWLEDFDANRVVLRNGHRPSCFYFVLSGRLVSNEEEENGHTVTTLLKRGD
KFGEEELATDDKRSATVMSQDDVELFVVHGDEYRDICLAKGDKDLSSLEICKKNPVFNHW
PIQKLIDNPGSWTMQNYKPGTLIVEDSSRCEWVYIMKSGQSKVVKCLRPREPEDDPARIR
KLLARKAREKLIKEIETNNVQTASRMGDDGDESRSGLAPSSTFFTTPLSRPQTFDNPDPA
VQAAIRDATRVQTAPHLANFPFLSSLYGRQLDQAAYVALEVLGTGDSFGFLAVLPKEQRG
ASVSLISCGAEVIQINKKFFQKYADETVYSLINMKFPPFPKQHDILKNLKGSFEWEDYKR
RTIDDALGRLYRPLVKP
Nucleotide sequence
Length: 1,854
>Phmamm.CG.MTP2014.S2.g00084.02.t
ATGGCCAGTCTAGCTGGCCAGCATCATCAACACACGCCCGCTAGGCCTGCTGCGTCACCT
GTTCCACAAATAAATCAGCCACAAGTTTCACCAAAACATGGAGAAAAAGTTCGACATGTT
AAGTTTGCCCCCAGTCTGTCTCATGGCGAATTAAAAGTGGAAGACCACGACAGCGCAAAG
CAAGGCAATAATGAAGTGCAAAGGCGCTCTTTTCCTAACGTTCATGGAGCCACATCTACG
TCGCCGCCTGCCAGGTCGAGATTCCATAACGTAGCGAATAATGCTAGGAGAGCTTCGATG
TTTGCCAGAAACTACCACCCTTCAAATATGATTGACAGAAAAATTACTTGTATACCGCCG
CTTTTGAGATTTAGACGCGCCGCAAAAGTGATTCGTCTGCTTTGCATGGTGTGCATTGCA
TGCAAGAAGAGTTTAACCTTCTCAGTTTCTCAAAATTCTTGGGTGGCGTTGAAAGAAGCG
CTCCTACGCGAAAGTGACGTCAGCAAAGATCAGGACAATTCGAAAAGCAAAGATTTAAAC
ACCGATGATCCTGAACTGACGTTCGATTTGAGCAAATTCCGTCGTGCTTCCAAGGACCAC
GATGAAATGCCGATCAAAATTAAAGAGCTGCTTCGAAAAAGACCCGCGGATAGAACTTCA
GAAGAAATTTCCAATATCATGAGAAGCATGCAAAAGTTGGAACTGTTCGCACGGTATCCA
CTAAATGTGCAGAGAAGATTATGTTCCAAAGCGTGGCTCGAGGATTTTGATGCAAACAGG
GTGGTTTTAAGAAACGGGCACAGGCCATCATGCTTTTACTTTGTTCTTTCAGGCCGTTTG
GTTTCAAACGAAGAGGAGGAAAATGGTCACACAGTTACTACTCTGCTGAAGAGAGGCGAC
AAGTTTGGCGAAGAAGAGCTAGCTACTGATGATAAACGATCAGCAACAGTTATGAGCCAA
GATGATGTCGAACTTTTCGTTGTGCATGGCGATGAATACAGGGACATCTGTTTGGCGAAA
GGCGACAAGGATTTAAGCAGCCTGGAAATATGCAAGAAAAATCCTGTTTTTAACCACTGG
CCAATACAGAAACTTATTGACAATCCTGGATCTTGGACAATGCAGAATTATAAACCGGGA
ACCCTTATTGTGGAGGACAGTTCCCGATGTGAATGGGTTTACATTATGAAAAGCGGCCAA
AGCAAAGTTGTCAAGTGTTTGAGGCCTAGGGAACCGGAAGATGACCCAGCGCGTATCCGG
AAGTTGCTCGCCCGGAAAGCCAGAGAGAAACTGATCAAAGAAATCGAAACCAACAATGTA
CAGACTGCATCGAGAATGGGAGACGACGGTGACGAGTCAAGGTCAGGTTTAGCTCCCTCG
TCCACTTTCTTCACCACGCCCCTTTCACGCCCACAAACCTTCGACAACCCAGATCCAGCT
GTGCAAGCTGCGATAAGGGATGCAACACGTGTTCAGACCGCCCCTCATCTTGCCAACTTC
CCCTTCCTGTCTTCGTTGTACGGTCGCCAACTCGATCAAGCCGCCTACGTTGCTCTGGAA
GTCTTAGGAACGGGAGACAGTTTTGGATTTCTCGCAGTTCTGCCGAAGGAACAACGAGGC
GCGAGCGTAAGTTTAATCAGCTGCGGTGCTGAAGTAATTCAGATCAACAAAAAGTTCTTT
CAGAAGTATGCCGACGAAACTGTGTACAGCCTCATCAACATGAAGTTTCCTCCGTTTCCA
AAACAGCACGATATCTTGAAGAATTTGAAAGGGTCTTTCGAATGGGAGGATTACAAACGA
CGCACAATAGATGATGCTCTCGGGCGCCTCTACCGACCGCTAGTCAAGCCATAG
| Gene3D |
RmlC-like_jellyroll (IPR014710) - T[189-345] 8.0E-28 |
| SUPERFAMILY |
cNMP-bd-like (IPR018490) - T[215-337] 4.06E-20 - T[348-565] 4.46E-11 |
| CDD |
cNMP-bd_dom (IPR000595) - T[235-337] 2.69424E-16 |
| SMART |
cNMP-bd_dom (IPR000595) - T[235-352] 0.0032 |
| ProSiteProfiles |
cNMP-bd_dom (IPR000595) - T[235-336] 17.703 - T[519-562] 8.604 |
| Pfam |
cNMP-bd_dom (IPR000595) - T[255-337] 1.0E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|
