- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2.g00084.01.t
Possible name(s)
AC008695.1; CNBD2; RAPGEF4
Gene model
Location
S2 [282,211 / 288,150]
Amino acid sequence
Length: 381
>Phmamm.CG.MTP2014.S2.g00084.01.p
ARYPLNVQRRLCSKAWLEDFDANRVVLRNGHRPSCFYFVLSGRLVSNEEEENGHTVTTLL
KRGDKFGEEELATDDKRSATVMSQDDVELFVVHGDEYRDICLAKGDKDLSSLEICKKNPV
FNHWPIQKLIDNPGSWTMQNYKPGTLIVEDSSRCEWVYIMKSGQSKVVKCLRPREPEDDP
ARIRKLLARKAREKLIKEIETNNVQTASRMGDDGDESRSGLAPSSTFFTTPLSRPQTFDN
PDPAVQAAIRDATRVQTAPHLANFPFLSSLYGRQLDQAAYVALEVLGTGDSFGFLAVLPK
EQRGASVSLISCGAEVIQINKKFFQKYADETVYSLINMKFPPFPKQHDILKNLKGSFEWE
DYKRRTIDDALGRLYRPLVKP
Nucleotide sequence
Length: 1,538
>Phmamm.CG.MTP2014.S2.g00084.01.t
TCGCACGGTATCCACTAAATGTGCAGAGAAGATTATGTTCCAAAGCGTGGCTCGAGGATT
TTGATGCAAACAGGGTGGTTTTAAGAAACGGGCACAGGCCATCATGCTTTTACTTTGTTC
TTTCAGGCCGTTTGGTTTCAAACGAAGAGGAGGAAAATGGTCACACAGTTACTACTCTGC
TGAAGAGAGGCGACAAGTTTGGCGAAGAAGAGCTAGCTACTGATGATAAACGATCAGCAA
CAGTTATGAGCCAAGATGATGTCGAACTTTTCGTTGTGCATGGCGATGAATACAGGGACA
TCTGTTTGGCGAAAGGCGACAAGGATTTAAGCAGCCTGGAAATATGCAAGAAAAATCCTG
TTTTTAACCACTGGCCAATACAGAAACTTATTGACAATCCTGGATCTTGGACAATGCAGA
ATTATAAACCGGGAACCCTTATTGTGGAGGACAGTTCCCGATGTGAATGGGTTTACATTA
TGAAAAGCGGCCAAAGCAAAGTTGTCAAGTGTTTGAGGCCTAGGGAACCGGAAGATGACC
CAGCGCGTATCCGGAAGTTGCTCGCCCGGAAAGCCAGAGAGAAACTGATCAAAGAAATCG
AAACCAACAATGTACAGACTGCATCGAGAATGGGAGACGACGGTGACGAGTCAAGGTCAG
GTTTAGCTCCCTCGTCCACTTTCTTCACCACGCCCCTTTCACGCCCACAAACCTTCGACA
ACCCAGATCCAGCTGTGCAAGCTGCGATAAGGGATGCAACACGTGTTCAGACCGCCCCTC
ATCTTGCCAACTTCCCCTTCCTGTCTTCGTTGTACGGTCGCCAACTCGATCAAGCCGCCT
ACGTTGCTCTGGAAGTCTTAGGAACGGGAGACAGTTTTGGATTTCTCGCAGTTCTGCCGA
AGGAACAACGAGGCGCGAGCGTAAGTTTAATCAGCTGCGGTGCTGAAGTAATTCAGATCA
ACAAAAAGTTCTTTCAGAAGTATGCCGACGAAACTGTGTACAGCCTCATCAACATGAAGT
TTCCTCCGTTTCCAAAACAGCACGATATCTTGAAGAATTTGAAAGGGTCTTTCGAATGGG
AGGATTACAAACGACGCACAATAGATGATGCTCTCGGGCGCCTCTACCGACCGCTAGTCA
AGCCATAGAGATAGTATGCTTTGTCGTGGCCGTAGAAACAAATTTAAAATGCCGCTATTA
ATGCTATGTCCAAGACCTAAACACCCAATTTATGCTCAGAACAACGCGTTAAACACACAT
ACAACTATTTAGATTATTGATTTTTGTAGCCTTTGTTGTTTTATTTCTTGCTTTGCACTT
TATATGAAAGTCCAAAGAATCGGACAGTTCTGATAAATGCTTTTTTTCCAACTTCTAAAT
CGTGCTTCAGTTTTTTGTTTTGTTTTTGTTAGCCTCATCAGTGTTCTAATAAACGATGGG
GGGGGGGACCGTAGACACAAATTTAAAATGCCGCTATTAATGCTATGTCCAAGACCTTAA
CACCCAATTTATGCTCAGAAAAACGCTTCACATACAAC
| Gene3D |
RmlC-like_jellyroll (IPR014710) - T[1-107] 3.4E-19 |
| SUPERFAMILY |
cNMP-bd-like (IPR018490) - T[4-101] 3.27E-16 - T[112-329] 1.35E-11 |
| CDD |
cNMP-bd_dom (IPR000595) - T[9-101] 1.77676E-15 |
| Pfam |
cNMP-bd_dom (IPR000595) - T[19-101] 4.7E-14 |
| ProSiteProfiles |
cNMP-bd_dom (IPR000595) - T[20-100] 16.636 - T[283-326] 8.604 |
| Protein Name | Identity | Bit Score | e-value |
|---|
