- Transcript 'Boleac.CG.SB_v3.S5.g...' >
- Transcript 'Cisavi.CG.ENS81.R1.5...' >
- EST 'BW407602' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S29.g01174.01.t
Possible name(s)
BMP2; BMP4; GDF10
Gene model
Location
S29 [95,125 / 104,356]
Amino acid sequence
Length: 623
>Phmamm.CG.MTP2014.S29.g01174.01.p
MSHKRFTFIHIAVFCLLLALCLSQASAKRSRKGGKGRRGNRPSDSENNRSEVAASRNNSS
AVASPELDVAVSAEEEEVSRGSSRTAGRSRSQKTRPQKRGKKRKGRKGKRGRKRPQKKVM
RDVMRKLFGFDHMIEGKGRLNSVIPIDPAVEDSGPIQPPEFMLELYQSYKEDSSMMHLKF
GSHGNTVRSFFSVAGNIPSKPRGLGKPITIASVDPADASTPTSSTSTSRQMRVYAFNVTT
IPKSESVVKAELRLDGQKSSLGDRNHGNRSQWVVYVGSYQIEPMEGREHKLIYRRVSNLV
SLRQTTSTLWQDRELARAVKTSRQKGHVLIAKFFNEGDATLYRIARDATSSNSLDSPESP
LPSVFVAADTERSKRDSGDDIPASGTPVLVVYCNDSNTIASLPDSSDGESLLNSTMKMTS
QSRSKRSSRRLENPDRPRSQPKNDLPDEVPKSSQVPGELDNMQTEPPGSEIMSTLKPSKQ
RKNKKARGKKRKKCRKSKKKKGKRKGCKPKKSHVELNSSSLACGRKPMLVDFEEIGWSSW
IVAPHTFSAYYCAGTCTLANSKTTNPTNHAIIQINLMATNPEVPAPCCVPDKLEAISVLY
LDANDIVVLKTFNDMVVNSCRCR
Nucleotide sequence
Length: 1,872
>Phmamm.CG.MTP2014.S29.g01174.01.t
ATGTCACACAAGCGCTTCACTTTTATCCACATCGCTGTGTTCTGTTTACTCTTGGCGCTT
TGCTTGTCGCAAGCCTCAGCGAAACGTTCACGAAAAGGCGGGAAAGGACGGCGCGGAAAC
CGGCCATCAGATAGCGAAAATAACCGAAGTGAGGTTGCCGCAAGTCGAAACAACTCGAGC
GCAGTCGCTTCGCCGGAGCTCGACGTCGCAGTTTCCGCGGAGGAAGAGGAAGTTTCACGC
GGAAGTAGTAGAACAGCTGGACGCTCACGATCGCAGAAAACAAGGCCACAAAAACGCGGG
AAAAAGCGCAAGGGCCGAAAAGGCAAACGCGGCCGCAAAAGGCCACAGAAAAAGGTGATG
CGGGACGTTATGCGTAAACTATTTGGATTTGATCACATGATTGAAGGAAAAGGAAGGTTG
AATTCGGTAATTCCGATTGATCCCGCGGTAGAGGATTCGGGTCCTATTCAACCTCCGGAG
TTTATGTTGGAACTCTACCAGTCCTACAAGGAGGACTCCAGTATGATGCACTTGAAGTTT
GGTTCCCATGGAAACACAGTGAGGAGTTTCTTCTCAGTGGCAGGAAACATCCCCAGTAAA
CCACGTGGTTTGGGTAAACCAATCACAATCGCTTCGGTGGATCCAGCCGACGCGAGCACT
CCTACGTCATCAACTTCTACGTCACGTCAGATGCGCGTTTACGCTTTCAACGTCACGACA
ATCCCAAAAAGCGAGTCCGTCGTTAAGGCCGAACTTCGATTGGACGGACAAAAATCGTCT
CTAGGCGACCGAAACCATGGCAACCGATCTCAGTGGGTCGTCTACGTGGGGTCGTATCAA
ATCGAACCCATGGAAGGAAGGGAACATAAACTGATCTACAGACGCGTCAGCAACCTGGTC
AGTCTGCGTCAGACCACGTCAACGCTTTGGCAAGACCGAGAACTGGCTCGCGCGGTAAAA
ACGAGCAGACAAAAAGGTCACGTGCTTATTGCCAAGTTCTTCAACGAGGGTGACGCGACC
CTCTACCGAATCGCACGAGATGCCACGTCATCGAATAGTCTTGATTCTCCTGAGTCACCG
TTGCCTTCTGTCTTTGTGGCAGCTGACACCGAGCGATCGAAAAGGGACAGCGGTGATGAC
ATCCCGGCCTCTGGAACCCCAGTGTTGGTCGTGTATTGCAATGATTCCAACACCATAGCG
AGTCTCCCAGATTCATCAGATGGCGAAAGTCTGTTGAACTCGACTATGAAGATGACTTCA
CAAAGCAGGTCGAAGCGTTCATCGAGGCGACTTGAAAATCCCGATCGACCGCGCAGTCAA
CCGAAGAACGATCTTCCCGATGAAGTCCCTAAATCCAGCCAAGTACCCGGTGAACTTGAC
AACATGCAAACCGAACCTCCAGGAAGCGAAATCATGTCCACACTGAAACCAAGCAAACAG
CGCAAAAACAAAAAGGCGCGCGGGAAAAAACGCAAGAAGTGCAGGAAGTCAAAGAAGAAG
AAGGGGAAAAGGAAGGGATGCAAGCCGAAGAAGTCCCACGTGGAGCTGAATTCCTCCTCT
CTGGCGTGCGGGAGGAAGCCGATGTTGGTTGATTTTGAAGAGATCGGTTGGTCCTCCTGG
ATAGTCGCTCCTCACACCTTTTCAGCTTACTACTGCGCGGGAACATGCACTCTAGCTAAC
AGCAAGACAACCAACCCGACCAACCACGCAATCATCCAGATAAACCTAATGGCAACAAAT
CCCGAAGTACCTGCTCCTTGCTGTGTTCCTGACAAGCTAGAAGCGATCAGCGTGCTTTAC
CTGGACGCCAATGACATCGTGGTGTTAAAAACATTTAACGACATGGTCGTGAACTCATGC
AGATGCCGGTGA
| PANTHER |
TGF-beta-rel (IPR015615) - T[12-623] 2.2E-60 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[154-295] 7.3E-8 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[501-623] 34.564 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[510-623] 4.0E-35 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[518-623] 9.03E-32 |
| Pfam |
TGF-b_C (IPR001839) - T[522-622] 5.5E-29 |
| SMART |
TGF-b_C (IPR001839) - T[523-623] 1.9E-45 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[541-556] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GDF10_HUMAN | 26.977 % | 135 | 2.88E-34 |
| BMP2_HUMAN | 39.456 % | 126 | 1.34E-31 |
| BMP4_HUMAN | 38.509 % | 122 | 3.12E-30 |