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  1. Transcript 'Cisavi.CG.ENS81.R16....' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2900.g17227.01.t

Possible name(s)

Phmamm.CG.MTP2014.S2900.g17227

Gene model

Phmamm.CG.MTP2014.S2900.g17227

Location

S2900 [5,915 / 8,159]

Sequences

Amino acid sequence

Length: 747

>Phmamm.CG.MTP2014.S2900.g17227.01.p
MGRILLFRALSERKLRGADTVNSLMKRAHDCFIQSNSSLSSDEGAYSAQSFVETLQELCR
ENSDLVPELIEVIVITGDRFLQESKSPFFALQQYEMAAFEMEKYYKDDRHILLNLYVKEA
IAVCQGDLGQYDKAVNTWLEVIARTKQLPLEAIDDISFKRGFKPHDSLINHLPKIKLALF
GLKSHDKAIADCGSIVRLINNLTESTRKYSLLSRIQARVYDILGELYERDNMYDKAIDSY
ALARSNFRRLYQQTNFTTESKLNRCYFKGGYYLKAVQNFRQSYLTECFRKCSPINEKAIQ
ILLDLLNCYKVVKDCVLLKELLDAVSLLLTLLKKSDDNSDIITAFFNLLVGITTLNRTEV
SKVITLLNRAAFHFWRQPAEDFARLVERATALVCRTETLDVKEFDSFLCKSVEKILKISP
RLAFNRQTTMMIRKTLETIGNERQYPTWCIPEDHINLQTALINYCTNIGDVSDALEALEP
TSPRGGKSVFFLRLSAAESLRKDEKLSEAMFACNLALTTVADITSISHSERDFLHAKAMS
SIARIFAEQNQTGAAYRACKQSIDFLRSLPIKHEFAVDQYIALLFDVAEMSKALGVTYEF
HYHGQALVGQIASLSLXGVTYEFHYHGQALVGQIASLSLNHTNNTNLLLLLEITNPLFSE
LQTVISSQLQLLRKVSQSPAFINWRHQGNEKAAVDLVSVLLTRIFTTFKYLSEDVNPEPL
FKALRDTIEHDLIPCAKLPSKEETQVS

Nucleotide sequence

Length: 2,244

>Phmamm.CG.MTP2014.S2900.g17227.01.t
ATGGGACGAATCCTGCTATTTCGAGCACTCAGTGAACGAAAATTACGAGGAGCGGACACT
GTTAACAGCCTGATGAAACGTGCTCACGACTGTTTCATCCAATCAAACTCTTCTCTGTCC
AGCGATGAAGGAGCTTACAGCGCACAGTCTTTTGTTGAAACGCTTCAGGAACTCTGTCGG
GAAAATTCTGATTTAGTACCGGAGTTGATCGAAGTAATCGTCATAACGGGCGACCGTTTC
TTACAGGAAAGCAAGTCGCCTTTTTTCGCTCTTCAGCAATACGAAATGGCGGCATTTGAA
ATGGAAAAGTACTACAAGGATGACAGGCATATTTTGCTTAATTTGTATGTAAAAGAAGCA
ATAGCCGTGTGCCAAGGGGACCTTGGCCAATACGACAAGGCCGTAAATACATGGCTCGAA
GTAATTGCAAGAACCAAACAATTACCACTCGAGGCTATCGATGACATCTCATTTAAACGA
GGTTTCAAGCCCCACGATTCTCTGATAAACCATTTGCCAAAAATCAAACTTGCCTTATTT
GGATTAAAGAGTCACGATAAAGCAATTGCCGATTGTGGTTCTATCGTCAGGTTGATTAAC
AATTTGACCGAGAGTACAAGGAAGTATAGCTTGCTTTCTCGCATTCAAGCACGGGTATAC
GATATACTAGGAGAACTTTACGAACGGGACAACATGTACGATAAAGCAATTGACAGCTAC
GCTCTGGCAAGATCCAACTTTAGACGGTTGTATCAACAAACTAACTTTACAACGGAATCG
AAACTGAATCGCTGTTATTTCAAGGGGGGATATTATTTGAAAGCAGTTCAGAATTTTAGA
CAATCTTACCTTACAGAATGCTTCAGAAAGTGCTCCCCTATTAACGAAAAAGCAATTCAA
ATTCTTTTGGATTTACTAAACTGCTACAAAGTAGTAAAGGATTGCGTACTACTTAAAGAA
TTACTGGATGCTGTCTCTTTACTGCTGACATTGCTAAAGAAGTCTGACGACAACTCGGAT
ATCATAACAGCATTTTTTAATCTATTGGTTGGAATTACAACATTAAACCGCACGGAAGTA
AGCAAAGTTATAACTCTTCTTAATCGAGCAGCGTTTCATTTCTGGCGACAACCTGCTGAG
GATTTTGCAAGATTAGTAGAAAGGGCAACTGCTTTAGTCTGCAGAACGGAAACACTCGAT
GTAAAGGAGTTTGACAGTTTTCTGTGTAAATCTGTTGAAAAAATCTTGAAGATATCTCCT
CGATTGGCCTTTAACAGGCAGACGACTATGATGATACGAAAAACTCTAGAAACCATTGGT
AATGAAAGACAATACCCTACCTGGTGCATTCCCGAAGATCACATTAATCTGCAAACAGCA
TTGATCAACTATTGCACAAATATAGGTGATGTATCCGATGCCTTGGAAGCATTGGAGCCA
ACGTCACCAAGAGGAGGTAAATCGGTGTTTTTTCTCAGACTCTCGGCAGCCGAATCCCTC
AGAAAGGACGAAAAGCTTTCAGAAGCAATGTTCGCTTGCAACTTGGCGTTAACAACCGTT
GCTGACATTACATCTATTTCGCACTCTGAAAGGGATTTCTTACATGCCAAGGCAATGTCG
TCGATCGCACGAATTTTTGCTGAACAAAATCAAACTGGGGCGGCTTACCGTGCTTGTAAA
CAATCCATTGACTTTCTACGATCGCTTCCAATCAAGCACGAATTCGCAGTTGACCAGTAC
ATAGCACTGTTGTTTGACGTAGCAGAGATGAGTAAGGCGCTGGGCGTAACTTACGAATTT
CACTACCACGGCCAAGCTTTGGTCGGTCAAATCGCTTCTTTGTCTTTAANGGGCGTAACT
TACGAATTTCACTACCACGGCCAAGCTTTGGTCGGTCAAATCGCTTCTTTGTCTTTAAAC
CATACAAACAATACAAATTTGCTGTTGCTTTTGGAAATTACAAACCCGTTGTTTAGCGAG
CTGCAAACAGTTATATCAAGTCAACTTCAACTTCTTCGTAAAGTCAGTCAGTCGCCGGCT
TTCATTAATTGGAGGCATCAGGGTAATGAAAAAGCGGCAGTAGACCTGGTTTCAGTCTTG
CTTACACGCATTTTTACAACTTTCAAATACCTGTCAGAAGATGTCAACCCCGAACCTCTA
TTTAAAGCATTACGGGACACCATTGAGCACGATTTGATTCCGTGTGCTAAACTTCCAAGC
AAGGAGGAAACGCAGGTCAGTTAA

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[47-400] 5.4E-10
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[90-280] 1.37E-7
SMART
TPR_repeat (IPR019734) - T[115-148] 160.0 - T[217-250] 18.0 - T[536-569] 31.0

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value