- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2882.g17202.01.t
Possible name(s)
HMCN1; SEMA5A; SEMA5B
Gene model
Location
S2882 [12,704 / 15,204]
Amino acid sequence
Length: 181
>Phmamm.CG.MTP2014.S2882.g17202.01.p
MSLQDACRIRQTEMLLSCAKTCDLCATGRSLPCSDISAASCSSYVVLGLCEQFKDSLENT
CRWSCGWYTVGAWGAWGRWTRCSASCGLGSQTRKRTCPSQDCGIAPSQEARQCNVQSCNT
DRYSTWTAWSSCQVTCGAGIRVRTRSCSIQAHFLFFSSHVRKFCDRSSDVFIPRHVQFIP
G
Nucleotide sequence
Length: 766
>Phmamm.CG.MTP2014.S2882.g17202.01.t
ATTTATTCTTGTTTAATATTGTTGAAATATTACAGAGGTTTGTGCGGATCAACTCGGCGC
GGTGCAGTGTAGACTTATGTCCCTTCAAGATGCTTGTCGAATCAGGCAAACAGAAATGTT
ACTGTCATGTGCCAAAACTTGCGATTTATGCGCAACTGGACGCTCCCTTCCTTGTTCTGA
TATAAGCGCTGCAAGCTGCAGCAGTTACGTTGTACTTGGACTCTGCGAGCAATTTAAGGA
TTCTCTGGAAAACACTTGTCGGTGGAGCTGTGGTTGGTACACCGTAGGAGCTTGGGGTGC
ATGGGGTAGATGGACTCGGTGCTCGGCTTCTTGTGGCCTGGGGAGTCAGACGCGAAAACG
AACATGTCCAAGTCAAGACTGCGGAATTGCTCCGAGCCAGGAAGCACGTCAATGCAATGT
CCAGTCTTGTAACACCGATCGTTACTCGACCTGGACTGCATGGTCTTCGTGTCAAGTTAC
TTGCGGTGCTGGAATTCGGGTCCGAACTAGAAGTTGTTCAATCCAAGCACATTTTCTGTT
CTTTTCATCCCATGTTCGGAAGTTTTGCGACAGGAGCAGCGATGTATTCATTCCCAGGCA
TGTCCAGTTTATTCCTGGCTGAGTTGGTCAAACTGGGGCGGTTGCACTCGCACATGTGGG
CAGGGAGTGAAAACCAGAAGACGGAACTGCAATATTGGCGTGGCGTCAAACTGTGCCGGT
GTGCCGGTTGAAAATCAGCACTGCAATGAATTTGATTGTCCAGGTA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[49-122] 5.5E-9 - T[123-166] 5.8E-9 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[70-119] 11.57 - T[120-173] 8.922 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[71-115] 1.31E-8 - T[123-152] 1.12E-8 |
| SMART |
TSP1_rpt (IPR000884) - T[73-119] 2.7E-10 - T[123-168] 0.034 |
| Pfam |
TSP1_rpt (IPR000884) - T[75-118] 1.0E-7 - T[124-150] 1.3E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|
