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  1. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S283.g06648.01.t

Possible name(s)

SLC6A11; SLC6A12; SLC6A13

Gene model

Phmamm.CG.MTP2014.S283.g06648

Location

S283 [4,359 / 9,268]

Sequences

Amino acid sequence

Length: 480

>Phmamm.CG.MTP2014.S283.g06648.01.p
MLIALLIRSVTLEGATNGIKAYLLPDLSKLANAQVWIEAVSQTVYSFGICFAAVTAIGRY
NKYDHNFYRNYVLRIPNPESGIDGEFNWPVLCSLIGAFVTVFFVTIKGIKSSGKVVYFTA
TFPYVMLIALLIRGVTLEGATDGIKAYLLPDLSKLANAQVWIEAVSQTVYSFGICFAAVT
AIGRYNKYDHNFYRSSLWIVPAGAFSSFTMGFVTFSVLGHLAHVQNVNITDVIQSGPGLV
FQVFPIGVALMPAPHIWSIMFFVMIYFVAVDSSFSEFEGLMTMIGDAFPKLVATPRNRAW
SNIGLGVTFFLLSLMQLSGYGIYIFELMNYYGASGICLLWAALCESITVGWLWDADQFKR
DVKNMTGSNLALYFKYCYKFLIPIVASSVLLFFIIKWEPLKVGDFQYPIWANLIGWFMSM
CSILCIPIVIIYVMWKGEGTMHERFKDGLQERRNSKYVVGRNGAMSAAEKKILDDHETPI

Nucleotide sequence

Length: 1,443

>Phmamm.CG.MTP2014.S283.g06648.01.t
ATGCTTATTGCATTGCTTATCCGTAGTGTAACACTGGAGGGCGCAACGAATGGAATCAAA
GCCTACTTGTTACCTGACCTTTCCAAGCTTGCCAATGCACAGGTTTGGATCGAGGCAGTG
TCACAGACTGTTTACTCTTTTGGAATCTGCTTCGCGGCCGTTACTGCGATTGGTCGTTAC
AACAAATACGACCACAATTTCTACAGAAATTATGTATTGAGGATTCCTAACCCTGAAAGT
GGAATAGATGGGGAATTCAACTGGCCAGTGTTGTGTTCACTAATTGGTGCTTTTGTCACA
GTTTTTTTCGTAACCATAAAGGGAATCAAGTCTAGCGGCAAGGTCGTCTACTTTACAGCT
ACCTTTCCGTACGTCATGCTTATTGCATTGCTTATCCGTGGTGTAACACTGGAGGGCGCA
ACTGATGGAATCAAAGCCTATTTGCTACCTGACCTTTCCAAGCTTGCCAATGCACAGGTT
TGGATCGAGGCAGTGTCACAGACTGTTTACTCTTTTGGAATCTGCTTCGCGGCCGTTACT
GCGATTGGTCGTTACAACAAATACGACCACAATTTCTACAGGTCGTCTTTGTGGATTGTA
CCAGCTGGTGCGTTCAGCTCTTTCACAATGGGTTTTGTAACCTTCAGTGTGCTCGGCCAT
TTAGCCCATGTCCAGAATGTAAATATAACTGATGTTATTCAGTCAGGGCCTGGACTCGTA
TTTCAAGTCTTTCCGATAGGTGTCGCCCTAATGCCAGCACCACACATTTGGTCAATCATG
TTTTTTGTGATGATCTACTTTGTTGCTGTCGACTCTTCCTTTTCGGAATTTGAAGGGTTG
ATGACAATGATTGGTGACGCTTTTCCCAAACTTGTCGCTACTCCTCGGAACAGAGCGTGG
TCAAACATTGGACTAGGCGTCACGTTTTTTCTACTTAGTTTAATGCAACTTTCGGGCTAT
GGAATTTACATCTTTGAACTGATGAACTACTACGGTGCATCAGGGATTTGCCTTTTATGG
GCGGCTCTTTGCGAATCCATAACCGTTGGTTGGCTATGGGATGCTGATCAATTCAAGCGA
GACGTGAAAAATATGACTGGAAGTAACCTTGCCCTGTATTTCAAATATTGCTACAAATTC
TTGATCCCAATTGTCGCTTCGTCGGTGTTGCTGTTTTTCATTATCAAATGGGAACCACTG
AAGGTAGGAGATTTCCAGTATCCGATTTGGGCGAACTTGATTGGCTGGTTCATGTCCATG
TGCTCCATTCTCTGCATTCCAATCGTAATTATTTACGTCATGTGGAAGGGCGAAGGAACA
ATGCATGAGAGATTCAAGGACGGTCTTCAAGAAAGGCGAAATTCAAAGTATGTGGTAGGA
AGAAATGGAGCTATGAGTGCAGCAGAAAAAAAGATTCTAGATGACCACGAAACGCCAATA
TGA

InterProScan

SUPERFAMILY
SNS_sf (IPR037272) - T[1-70] 1.18E-20 - T[67-436] 9.29E-92
ProSiteProfiles
Na/ntran_symport (IPR000175) - T[1-439] 59.132
PANTHER
Na/ntran_symport (IPR000175) - T[1-73] 8.8E-157 - T[67-446] 8.8E-157
Pfam
Na/ntran_symport (IPR000175) - T[66-435] 3.1E-106

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
S6A12_HUMAN 37.5 % 292 2.14E-92
S6A13_HUMAN 39.74 % 298 1.36E-94
S6A11_HUMAN 41.039 % 303 3.29E-96