Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S272.g06488.01.t

Possible name(s)

MPDU1; PQLC3

Gene model

Phmamm.CG.MTP2014.S272.g06488

Location

S272 [65,561 / 76,819]

Sequences

Amino acid sequence

Length: 246

>Phmamm.CG.MTP2014.S272.g06488.01.p
RTGQPQPERKLQKKNMNALMSEECYEEFFYKLNFFHGDCLSALISKVLGYSIVAGAVLVK
VPQIQKILSAGSAKGLSFTSLLLELYAVTSMFSYSIAKGFPFSTWGDSFFLMLQNIMIGA
LIQHYKGSTSGAIGFVVIFLGILGVLMSGITPVSVLAALQASNMPAVVISKMIQALDNYR
NGTTGQLSAITVFLIFGGSIARIFTSIQETGDQLVIMNYVVSTICNGIIAAQMVRYWNVK
PKAKAE

Nucleotide sequence

Length: 1,000

>Phmamm.CG.MTP2014.S272.g06488.01.t
ACCGGACCGGTCAACCTCAACCAGAGAGAAAATTGCAAAAGAAAAACATGAATGCACTTA
TGTCAGAAGAATGCTACGAGGAATTCTTTTACAAGCTGAATTTCTTCCATGGGGATTGCC
TTTCAGCACTTATTAGCAAAGTCCTTGGTTATTCGATTGTGGCCGGAGCAGTTTTGGTCA
AGGTTCCACAAATTCAAAAAATTTTATCTGCTGGAAGTGCGAAAGGTCTTAGCTTTACTT
CACTTCTTTTGGAACTATACGCTGTTACTTCAATGTTTTCATACAGTATTGCTAAAGGTT
TTCCATTCAGCACATGGGGTGACTCATTTTTTCTTATGCTTCAGAATATTATGATTGGTG
CTTTAATTCAGCATTATAAAGGCAGTACAAGTGGAGCAATTGGATTTGTTGTTATTTTTC
TTGGCATTTTGGGTGTTTTGATGTCAGGCATAACACCGGTTTCTGTTTTGGCTGCACTTC
AAGCAAGCAATATGCCAGCGGTTGTCATCAGTAAGATGATTCAGGCGCTTGACAATTACA
GAAATGGAACCACTGGCCAGCTGTCAGCTATTACTGTATTTTTGATATTCGGTGGATCAA
TTGCGCGTATTTTCACTTCTATTCAGGAAACAGGCGATCAATTGGTGATCATGAACTATG
TTGTATCCACTATATGCAATGGTATAATCGCAGCCCAGATGGTCCGCTACTGGAACGTCA
AGCCTAAAGCCAAGGCTGAATAATTGCACAATTCTTTGCTTGTTCTGCTACCTGCTAAGC
ACTTGTTATGTTGATTATTTCTTGTGTTGATTCAATTCCACTGATTCGGTGAAAGTTTAC
CTTTCTCTTGATTTGAAATCACTATTTTACACCAGGAAAGGTTTACATAATAATGTTTTG
GACGAAGAAAAATGTTGTAATCAAGATTTTGTTACCGATGCAGATTGCTTCAACGCAGAC
TGATGAAGCAAGTTGAGTTTATGCAATATTTTTATGGCGT

InterProScan

PIRSF	MannP-dilichol_defect-1 (IPR016817) - T[8-246] 3.8E-82
PANTHER	MannP-dilichol_defect-1 (IPR016817) - T[11-245] 4.3E-93
Pfam	PQ-loop_rpt (IPR006603) - T[44-103] 1.9E-12 - T[174-211] 1.5E-6
SMART	PQ-loop_rpt (IPR006603) - T[58-89] 0.0021 - T[169-200] 0.098

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MPU1_HUMAN	52.282 %	246	3.23E-82