- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2696.g16975.01.t
Possible name(s)
ADGRB2; ADGRB3; HMCN1
Gene model
Location
S2696 [519 / 2,524]
Amino acid sequence
Length: 519
>Phmamm.CG.MTP2014.S2696.g16975.01.p
MSLDTPGTTKTRRIVKLYDTKLRRDNRGRELTHTVFSLKTQTYSTAGINEGECLILEGCW
IDCHCYYEPSNNQIQLRPGEDLHRSAVLNGRDIYGQPPCLPFDPNGSPSSILNSNHQCRL
SGCVMDPEYNSQKLRDYLCAIAESDAVPANLKQRFWNQVLQGIIGPHNWQEILQQMSENI
CPNVGSNPLFNQRLSLPGCTNIYTQFSHTPLPNGSDPNPHSNPINQLSANLGPTTNNTAT
NPPVSGRFYNNQYPSYPPPQYPQLQCPYRPFAVQGYAPLQGSFTGCCERHYCYVPRAQAS
SGNSGVSPYWSMWSDYGICSVSCGGGNKTRTRTCVGGQDEGDCGSDNEQTTVCSEQACPF
WDEWGEWDQCSEPCNGGTRSRRRQCLPSGRRCSGSGIESEACNTCTCPSFSDFTRWTTCN
VTVGCGRRSRSRTCEDPGTCAAGCATIPTGLYEEEDCIVYCGDETVTKTACTFRVWPLGC
QQTVSTSCDCAQATETCKPCIPYTGLVGEMTCTCPGWGK
Nucleotide sequence
Length: 1,560
>Phmamm.CG.MTP2014.S2696.g16975.01.t
ATGTCTCTTGACACACCAGGAACTACAAAAACCAGACGGATTGTTAAGTTATATGATACC
AAGTTAAGAAGGGACAACCGTGGCAGGGAGCTTACACATACTGTTTTCTCACTCAAAACC
CAGACTTATTCGACGGCGGGTATAAACGAGGGAGAATGTCTCATTTTGGAAGGTTGCTGG
ATCGATTGTCACTGCTATTATGAACCAAGTAACAACCAAATTCAATTACGCCCCGGCGAA
GACCTGCACAGAAGCGCGGTGCTAAACGGCCGTGACATCTATGGTCAGCCGCCGTGTCTG
CCGTTCGACCCCAATGGTTCACCGTCTAGCATTCTTAATAGCAACCATCAATGTCGCTTA
TCTGGATGTGTTATGGATCCTGAGTACAACAGTCAAAAGTTACGCGACTATCTTTGTGCA
ATTGCCGAGTCCGACGCTGTCCCAGCCAATCTCAAACAGAGATTTTGGAATCAAGTTTTA
CAGGGGATCATCGGACCACACAACTGGCAGGAAATTCTTCAGCAGATGTCAGAAAACATC
TGCCCGAATGTCGGTTCAAACCCGCTTTTCAACCAACGATTATCTCTTCCGGGTTGTACA
AACATTTACACTCAATTCAGCCACACTCCTCTGCCAAACGGTTCAGACCCAAATCCACAT
TCTAACCCAATCAATCAACTTTCTGCTAATTTAGGCCCCACCACTAACAACACCGCCACC
AACCCTCCCGTAAGCGGTCGCTTTTACAATAATCAATACCCATCATACCCACCACCACAA
TACCCACAACTTCAGTGTCCATACAGGCCATTTGCGGTACAGGGATACGCACCTCTGCAA
GGCAGCTTCACCGGTTGCTGTGAGCGCCATTACTGCTACGTTCCTCGTGCACAAGCCAGT
AGTGGTAATTCTGGAGTGTCACCTTACTGGTCAATGTGGTCTGACTACGGAATATGTTCG
GTTTCGTGCGGCGGTGGAAACAAAACACGTACCAGAACCTGCGTCGGAGGACAAGATGAA
GGGGATTGTGGAAGTGATAATGAGCAGACTACAGTTTGCTCGGAACAGGCCTGTCCATTT
TGGGACGAATGGGGAGAGTGGGATCAATGCAGCGAGCCATGCAATGGCGGAACGCGATCA
AGAAGACGCCAATGCCTTCCGTCTGGTAGGAGATGTTCTGGATCTGGCATAGAAAGTGAA
GCTTGCAACACTTGCACATGTCCTTCCTTCAGTGACTTTACTAGGTGGACAACATGTAAC
GTAACTGTTGGATGTGGAAGGCGATCCAGATCACGTACTTGCGAGGACCCTGGTACGTGC
GCTGCCGGTTGCGCAACCATACCCACAGGTCTTTACGAAGAAGAAGATTGCATCGTTTAT
TGCGGCGACGAAACAGTCACCAAAACGGCATGTACGTTTCGCGTGTGGCCTTTGGGATGC
CAACAGACCGTATCCACTTCGTGCGACTGCGCTCAAGCAACAGAAACCTGCAAACCCTGT
ATTCCATACACTGGTTTAGTGGGAGAAATGACATGCACGTGTCCTGGTTGGGGAAAATAA
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[306-358] 1.57E-9 - T[358-404] 2.09E-9 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[306-359] 3.1E-12 - T[360-407] 1.2E-7 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[307-357] 10.485 - T[358-408] 12.118 |
| SMART |
TSP1_rpt (IPR000884) - T[310-359] 1.3E-8 - T[361-408] 1.7E-7 - T[410-462] 0.11 |
| Pfam |
TSP1_rpt (IPR000884) - T[311-358] 6.6E-8 - T[363-407] 1.5E-5 - T[411-440] 0.065 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 35.762 % | 85.1 | 3.78E-17 |
| AGRB2_HUMAN | 35.862 % | 86.3 | 1.46E-17 |
| AGRB3_HUMAN | 36.913 % | 85.1 | 3.28E-17 |
