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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...'
  2. Transcript 'Moocul.CG.ELv1_2.S11...'
  3. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2669.g16939.01.t

Possible name(s)

NLRC3; NLRP5; TCTE1

Location

S2669 [4,797 / 8,762]

Sequences

Amino acid sequence

Length: 330

>Phmamm.CG.MTP2014.S2669.g16939.01.p
MYGPNRALTLQMKELTLSHNPIGDKGAEALATCLHNVDLLNLWRCGITVIGTTALSSYIN
KRSNPLKGLTLGNNPISDKGAEAWNTSLERNQIGNDGAKYLATCIHNIDELNLTNCAITD
DGLDELSSAIYKSPYQLANCFLWNDYEFINNTSSVVGSEGAKLEVGGCIVEIPQDALSEE
TTIQLTSYYGKRKQADQLTPTLKCEPNHFKFKKDIFVTLPTCYISEKTQQVVVQTSVNGL
EWNDIETTYYQDSMKIKFSTTHFTWFVVKWIKQFSTKMKFLKCELGENLEIEEPKTRLLY
ISVFDDVGGINWESANKERKEIFFTSFQTR

Nucleotide sequence

Length: 993

>Phmamm.CG.MTP2014.S2669.g16939.01.t
ATGTATGGCCCTAACCGAGCACTTACTTTACAGATGAAAGAGTTAACACTCAGCCACAAC
CCAATCGGCGACAAAGGTGCAGAAGCGTTAGCAACCTGCTTACACAATGTTGACCTACTA
AATCTTTGGAGATGTGGAATCACCGTCATTGGAACAACAGCGTTGTCATCATACATCAAC
AAACGGTCAAACCCGCTGAAAGGGTTAACGCTCGGCAACAATCCAATCAGCGACAAAGGT
GCAGAAGCATGGAATACATCTCTGGAGCGCAATCAAATAGGAAACGACGGGGCAAAGTAT
TTAGCGACTTGCATTCACAATATTGACGAACTTAATCTTACTAATTGTGCGATAACAGAT
GATGGATTGGATGAGTTGTCATCAGCCATTTACAAAAGTCCCTATCAGTTGGCAAATTGT
TTTTTGTGGAACGACTACGAGTTTATCAACAACACGTCATCAGTTGTTGGATCGGAGGGT
GCTAAACTTGAGGTTGGTGGATGTATTGTTGAAATTCCACAAGACGCTTTGAGCGAAGAG
ACAACAATCCAACTTACTTCGTACTACGGAAAACGAAAACAAGCGGATCAGCTGACTCCT
ACTCTTAAATGTGAACCAAATCATTTTAAATTCAAAAAAGACATTTTCGTCACTTTGCCA
ACCTGCTATATTTCTGAAAAAACACAACAAGTTGTGGTGCAAACAAGTGTTAATGGTTTG
GAATGGAACGATATCGAAACCACATACTACCAAGACAGCATGAAGATCAAATTTTCCACC
ACACATTTTACATGGTTTGTTGTGAAATGGATTAAACAGTTTTCAACTAAAATGAAGTTT
CTGAAATGCGAATTGGGAGAGAATTTAGAAATCGAAGAACCAAAAACACGGTTGCTGTAT
ATTTCTGTGTTCGATGATGTTGGCGGAATAAATTGGGAAAGTGCAAACAAGGAAAGAAAG
GAGATTTTTTTCACCTCATTTCAAACAAGGTGA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[5-88] 5.9E-15 - T[89-144] 4.6E-6
Pfam
Leu-rich_rpt (IPR001611) - T[12-31] 1.0E-4 - T[88-102] 1.5 - T[110-127] 0.11
Pfam
ZU5_dom (IPR000906) - T[152-235] 2.3E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value