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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  2. Transcript 'Harore.CG.MTP2014.S4...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Haaura.CG.MTP2014.S3...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S264.g06344.02.t

Possible name(s)

SNX2; SNX30; SNX7

Gene model

Phmamm.CG.MTP2014.S264.g06344

Location

S264 [72,696 / 75,268]

Sequences

Amino acid sequence

Length: 341

>Phmamm.CG.MTP2014.S264.g06344.02.p
MENVDPLTAATNEPSDPEDELNTYHEKVDAEEDNVKQEEWDTDAQDLFTTVDNPEKHILA
METYISYRVTTKEFTAYRKQSDGIMSKVSGSVKSIATNTRVKERDPEFNEMLDYITDFSE
KMGVLDRIGERLLLEKKELTTEMKEFGPTFSMWASGEDDTVSPIMTSISECLDLCTGAAE
ENAKRHELNFVPPLKEYILYSDAVKQVLKRRDGYQANYDRLVDEHQKRRSEKENLPKSDQ
SYSISAMMGKSPDEVKQQKEQKLNQQIEELAEKRDKSYDELEKANGNLRADKDRWTEHKI
QDLATLFADMAQSQITYHTECLSAWENILPTMQEPSAENQQ

Nucleotide sequence

Length: 1,026

>Phmamm.CG.MTP2014.S264.g06344.02.t
ATGGAAAATGTCGACCCATTAACAGCAGCAACCAACGAACCGTCAGACCCAGAAGACGAA
CTCAACACGTACCATGAGAAGGTGGATGCAGAAGAGGACAATGTGAAACAGGAAGAATGG
GATACAGATGCTCAAGATTTGTTTACAACAGTTGATAATCCAGAGAAACACATTTTGGCA
ATGGAGACATACATTTCATATAGAGTTACCACAAAAGAGTTTACTGCATATCGGAAACAA
AGTGACGGAATAATGTCTAAGGTCAGCGGCTCTGTGAAGTCCATTGCAACTAATACTCGT
GTTAAAGAGAGGGACCCAGAGTTTAATGAGATGCTGGATTATATCACAGACTTCAGTGAG
AAAATGGGGGTACTTGACAGGATTGGAGAGCGTCTTCTTTTAGAAAAGAAAGAACTAACC
ACTGAAATGAAGGAGTTTGGTCCAACTTTTTCAATGTGGGCTTCTGGTGAAGATGACACT
GTATCGCCTATAATGACTTCAATCAGTGAGTGTTTGGATCTCTGCACAGGAGCTGCTGAA
GAAAATGCAAAGAGACATGAACTTAACTTTGTACCACCTTTAAAGGAGTATATATTATAT
TCTGATGCAGTGAAGCAGGTGCTAAAACGCAGAGATGGTTACCAGGCAAACTATGATCGA
CTGGTTGATGAGCATCAAAAAAGACGCAGTGAAAAAGAAAATCTCCCCAAGTCAGACCAA
TCGTACTCTATTAGTGCCATGATGGGTAAATCCCCTGATGAAGTAAAACAGCAAAAAGAA
CAAAAACTAAATCAACAAATTGAAGAATTGGCAGAAAAGCGGGACAAAAGCTATGATGAA
CTGGAGAAGGCTAATGGTAACTTAAGGGCAGATAAAGATCGTTGGACTGAACACAAAATC
CAAGACCTAGCAACCTTGTTTGCTGACATGGCACAATCACAAATAACGTATCACACTGAG
TGTCTTTCAGCATGGGAAAACATATTGCCAACAATGCAGGAACCTTCTGCTGAAAACCAA
CAGTAG

InterProScan

Pfam
Vps5_C (IPR015404) - T[84-330] 4.4E-18
Gene3D
AH/BAR_dom_sf (IPR027267) - T[98-334] 9.3E-47
SUPERFAMILY
AH/BAR_dom_sf (IPR027267) - T[101-336] 1.15E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNX30_HUMAN 32.509 % 161 8.72E-46
SNX7_HUMAN 31.008 % 142 4.42E-39