- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Moocci.CG.ELv1_2.S56...' >
- Region 'REG00001440' >
- Transcript 'KH2012:KH.S988.1.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S264.g06344.01.t
Possible name(s)
SNX2; SNX30; SNX7
Gene model
Location
S264 [72,685 / 75,377]
Amino acid sequence
Length: 440
>Phmamm.CG.MTP2014.S264.g06344.01.p
MKTNTANMENVDPLTAATNEPSDPEDELNTYHEKVDAEEDNVKQEEWDTDAQDLFTTVDN
PEKHILAMETYISYRVTTKTTRSCFDNSEYMTQRRYQDFVWLRTKLENDHPTHLIPPLPA
KFVVKGMLDRFNAEFTKRRCMALHKFLSRLSEHPVLSFNENLKVFLTSKAHEFTAYRKQS
DGIMSKVSGSVKSIATNTRVKERDPEFNEMLDYITDFSEKMGVLDRIGERLLLEKKELTT
EMKEFGPTFSMWASGEDDTVSPIMTSISECLDLCTGAAEENAKRHELNFVPPLKEYILYS
DAVKQVLKRRDGYQANYDRLVDEHQKRRSEKENLPKSDQSYSISAMMGKSPDEVKQQKEQ
KLNQQIEELAEKRDKSYDELEKANGNLRADKDRWTEHKIQDLATLFADMAQSQITYHTEC
LSAWENILPTMQEPSAENQQ
Nucleotide sequence
Length: 1,358
>Phmamm.CG.MTP2014.S264.g06344.01.t
CATGGGTAACTGAAGCACCGGAGCATGAAGACGAACACTGCAAACATGGAAAATGTCGAC
CCATTAACAGCAGCAACCAACGAACCGTCAGACCCAGAAGACGAACTCAACACGTACCAT
GAGAAGGTGGATGCAGAAGAGGACAATGTGAAACAGGAAGAATGGGATACAGATGCTCAA
GATTTGTTTACAACAGTTGATAATCCAGAGAAACACATTTTGGCAATGGAGACATACATT
TCATATAGAGTTACCACAAAAACAACCAGAAGCTGCTTTGACAACAGCGAGTACATGACT
CAACGCAGATATCAAGACTTCGTTTGGTTGCGGACCAAGTTAGAAAACGATCATCCTACA
CACCTTATACCACCACTCCCAGCAAAGTTTGTGGTGAAAGGAATGTTGGATCGATTCAAT
GCAGAGTTTACCAAGAGAAGGTGTATGGCCCTGCACAAATTTCTTTCACGACTCTCTGAG
CATCCAGTTCTATCTTTCAATGAAAACCTGAAGGTTTTCCTCACATCAAAGGCACATGAG
TTTACTGCATATCGGAAACAAAGTGACGGAATAATGTCTAAGGTCAGCGGCTCTGTGAAG
TCCATTGCAACTAATACTCGTGTTAAAGAGAGGGACCCAGAGTTTAATGAGATGCTGGAT
TATATCACAGACTTCAGTGAGAAAATGGGGGTACTTGACAGGATTGGAGAGCGTCTTCTT
TTAGAAAAGAAAGAACTAACCACTGAAATGAAGGAGTTTGGTCCAACTTTTTCAATGTGG
GCTTCTGGTGAAGATGACACTGTATCGCCTATAATGACTTCAATCAGTGAGTGTTTGGAT
CTCTGCACAGGAGCTGCTGAAGAAAATGCAAAGAGACATGAACTTAACTTTGTACCACCT
TTAAAGGAGTATATATTATATTCTGATGCAGTGAAGCAGGTGCTAAAACGCAGAGATGGT
TACCAGGCAAACTATGATCGACTGGTTGATGAGCATCAAAAAAGACGCAGTGAAAAAGAA
AATCTCCCCAAGTCAGACCAATCGTACTCTATTAGTGCCATGATGGGTAAATCCCCTGAT
GAAGTAAAACAGCAAAAAGAACAAAAACTAAATCAACAAATTGAAGAATTGGCAGAAAAG
CGGGACAAAAGCTATGATGAACTGGAGAAGGCTAATGGTAACTTAAGGGCAGATAAAGAT
CGTTGGACTGAACACAAAATCCAAGACCTAGCAACCTTGTTTGCTGACATGGCACAATCA
CAAATAACGTATCACACTGAGTGTCTTTCAGCATGGGAAAACATATTGCCAACAATGCAG
GAACCTTCTGCTGAAAACCAACAGTAGCCAAGTCTGTA
| Gene3D |
PX_dom_sf (IPR036871) - T[47-181] 7.5E-35 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[50-169] 1.96E-29 |
| SMART |
Phox (IPR001683) - T[50-169] 1.4E-18 |
| ProSiteProfiles |
Phox (IPR001683) - T[52-173] 17.305 |
| Pfam |
Phox (IPR001683) - T[60-168] 3.1E-21 |
| Pfam |
Vps5_C (IPR015404) - T[183-429] 8.8E-18 |
| Gene3D |
AH/BAR_dom_sf (IPR027267) - T[197-433] 1.9E-46 |
| SUPERFAMILY |
AH/BAR_dom_sf (IPR027267) - T[200-435] 2.3E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX2_HUMAN | 26.316 % | 125 | 1.5E-31 |
| SNX30_HUMAN | 40.933 % | 316 | 2.25E-104 |
| SNX7_HUMAN | 39.737 % | 306 | 6.76E-101 |