- Transcript 'Mooccu.CG.ELv1_2.S36...' >
- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2616.g16881.01.t
Possible name(s)
CSMD1; CSMD2; CUBN
Gene model
Location
S2616 [12,176 / 14,368]
Amino acid sequence
Length: 462
>Phmamm.CG.MTP2014.S2616.g16881.01.p
MGETAGDVGFHTYIPDSAEMTSFTMHTEGVAYKGMKTDRKGAQEMLDKAIKGDHVAVMHS
SKRLTGELQFRSIAAYLCAKLLQKPSSHNCNRQKNTIHIKSNTEIAFNIEYKITVPDVTD
SDVKIQNRAQVVFDLYGSTVQDLVGEIFSPNYPQPYPNSADIAWLIRVPEDKIVQLNIVD
IDIEECCDRLTIYDGNSVDGPVIDIISGSLTNSNSFYRSTENSMCLHFTSDLSGSKNGFK
ATVSYDVRFTADLYPKTFSYVPEKPKVSNYNALNCSATEDLYPVSCAYYSLASPNYPSQY
FNDIDCWWYIRPPYQENLIVSLEITYLDLETNYDYLRLYDSSLLLAELTGTTYSTESYIA
VVYMSVNFVTDKSVTKGGFFLQYGALPSPQCNETQQLDAYPTFYQTIQSPNYPFYYYNML
YCSWRIYSQSPGWVIQLHPIIPVSISTTLTAGGTSASLIKKT
Nucleotide sequence
Length: 1,389
>Phmamm.CG.MTP2014.S2616.g16881.01.t
ATGGGTGAAACAGCTGGTGACGTCGGTTTTCACACGTATATCCCCGATTCCGCTGAAATG
ACTTCATTTACTATGCACACGGAAGGAGTTGCTTACAAAGGAATGAAAACTGACCGCAAG
GGAGCGCAGGAGATGCTCGATAAAGCAATAAAGGGCGATCACGTGGCTGTTATGCATTCC
TCGAAACGTCTAACAGGTGAACTGCAATTTCGTAGTATTGCAGCTTATCTTTGTGCCAAA
CTTTTGCAGAAACCTTCGTCACACAACTGCAATCGGCAAAAAAACACGATCCACATCAAA
AGTAACACCGAGATTGCCTTTAACATCGAGTACAAAATAACCGTGCCAGACGTGACCGAC
TCCGATGTGAAGATACAAAACAGGGCCCAGGTGGTATTTGATCTTTACGGCTCCACTGTT
CAGGATTTGGTGGGTGAGATATTTTCTCCCAACTATCCTCAACCTTATCCAAACTCTGCT
GACATCGCGTGGCTAATTCGTGTGCCTGAGGATAAAATAGTGCAACTTAATATCGTTGAC
ATAGATATCGAGGAATGCTGCGACCGACTTACCATCTATGACGGTAACTCTGTTGATGGA
CCAGTTATTGACATTATATCGGGTTCATTGACCAATTCGAATAGCTTTTACCGTTCCACT
GAAAATAGTATGTGTTTACATTTTACTTCTGACCTTTCAGGGTCAAAAAATGGATTCAAA
GCTACTGTTTCTTATGATGTAAGATTTACTGCTGACCTGTACCCAAAAACATTCTCTTAT
GTACCAGAAAAACCAAAAGTTTCCAATTATAATGCTTTAAATTGTTCTGCCACAGAGGAT
CTATACCCCGTATCGTGTGCTTACTATTCTTTAGCTTCACCCAATTATCCCAGCCAGTAT
TTCAACGATATTGACTGCTGGTGGTACATTCGCCCCCCTTATCAAGAAAACCTGATAGTC
TCCTTGGAGATTACCTACCTCGACTTGGAAACAAACTACGATTATCTTCGCTTGTACGAC
AGTAGTTTGTTACTTGCTGAATTAACTGGAACGACTTACTCCACTGAGTCATATATTGCT
GTCGTGTATATGTCTGTTAACTTTGTGACTGACAAATCAGTAACAAAAGGGGGCTTTTTT
CTGCAATACGGAGCACTACCTTCACCCCAATGCAACGAAACTCAACAATTAGATGCCTAC
CCTACCTTTTATCAAACAATACAATCCCCAAACTACCCCTTTTATTACTATAATATGCTT
TACTGCTCTTGGCGCATTTACTCACAATCTCCTGGTTGGGTGATACAACTTCACCCAATT
ATCCCAGTCAGTATTTCAACGACATTGACTGCTGGTGGTACATCCGCCTCCCTTATCAAG
AAAACCTAA
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[135-247] 2.0E-25 - T[285-385] 4.8E-17 |
| SMART |
CUB_dom (IPR000859) - T[136-246] 1.6E-29 - T[275-386] 6.0E-13 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[136-246] 15.228 - T[275-386] 14.889 |
| Pfam |
CUB_dom (IPR000859) - T[138-242] 1.5E-18 - T[289-383] 2.8E-13 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[142-243] 1.16E-27 - T[288-385] 7.85E-19 - T[405-438] 9.03E-7 |
| CDD |
CUB_dom (IPR000859) - T[145-244] 1.18892E-25 - T[290-383] 1.0563E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TLL1_HUMAN | 25.379 % | 82 | 1.77E-16 |