- Transcript 'Cisavi.CG.ENS81.R19....' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S257.g06228.01.t
Possible name(s)
CTGF; CYR61; NOV
Gene model
Location
S257 [23,877 / 26,032]
Amino acid sequence
Length: 246
>Phmamm.CG.MTP2014.S257.g06228.01.p
MGCKATCTCLDGHIGCQPKCPMTVSAVPPKNCPHPRLVTKPHKCCPEWICRSHGRNNTTS
HNRVAHTPRVVTRARPSMLETRRSQPIQVTIREDSCVVQTTEWSPCSTTCGWGISERVTN
DNKNCKLRKEKRVCQLRPCNSDPTAHIKRGKRCVRTVKPQRRVRYSFSGCQSKVYTPKYC
GKCTDGRCCTPKNTVTKAVKFTCENGFQFKKRMMVIKSCQCNQRCAESPNDIFHALRHMG
GDTWQA
Nucleotide sequence
Length: 741
>Phmamm.CG.MTP2014.S257.g06228.01.t
ATGGGATGCAAAGCCACCTGCACCTGCTTGGACGGACACATCGGTTGTCAGCCAAAATGC
CCAATGACCGTGTCTGCAGTACCACCAAAGAATTGCCCGCATCCACGATTGGTCACCAAA
CCTCACAAGTGCTGTCCTGAATGGATCTGCAGATCGCACGGACGCAACAACACGACTTCC
CACAACCGGGTGGCTCACACACCACGAGTAGTGACCCGCGCCCGCCCATCAATGCTAGAA
ACTCGCCGAAGCCAACCAATCCAGGTTACGATCCGTGAAGATAGTTGTGTGGTGCAGACC
ACTGAATGGTCCCCGTGCTCAACCACTTGCGGCTGGGGAATCTCTGAACGCGTCACCAAC
GACAACAAAAACTGCAAACTCCGCAAAGAAAAGCGAGTCTGTCAACTTCGCCCTTGCAAC
AGTGATCCAACCGCCCACATTAAGCGTGGAAAGCGTTGCGTCCGCACAGTGAAGCCACAA
CGTCGTGTTCGCTATTCCTTCTCTGGCTGTCAATCAAAAGTGTACACTCCCAAGTATTGC
GGCAAATGCACTGACGGAAGATGCTGTACTCCCAAAAACACCGTTACCAAGGCCGTAAAA
TTCACCTGCGAGAATGGCTTCCAGTTCAAGAAGAGAATGATGGTGATTAAATCCTGCCAA
TGCAACCAGCGATGTGCCGAATCGCCCAATGACATCTTCCACGCTTTGCGTCACATGGGT
GGTGATACCTGGCAGGCGTGA
| ProSiteProfiles |
VWF_dom (IPR001007) - T[1-51] 8.524 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[84-146] 1.1E-7 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[93-139] 5.89E-6 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[94-140] 8.683 |
| SMART |
TSP1_rpt (IPR000884) - T[97-140] 7.7E-4 |
| Pfam |
TSP1_rpt (IPR000884) - T[100-139] 1.3E-4 |
| ProSiteProfiles |
Cys_knot_C (IPR006207) - T[153-226] 13.572 |
| Pfam |
Glyco_hormone_CN (IPR006208) - T[153-238] 2.4E-8 |
| SMART |
Cys_knot_C (IPR006207) - T[158-226] 4.8E-16 |
| ProSitePatterns |
Cys_knot_C (IPR006207) - T[188-225] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CTGF_HUMAN | 45.679 % | 203 | 2.93E-64 |
| CYR61_HUMAN | 40.467 % | 169 | 1.81E-50 |
| NOV_HUMAN | 38.397 % | 167 | 4.0E-50 |