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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.337.v1...' > 
  2. Transcript 'Phfumi.CG.MTP2014.S4...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Mooccu.CG.ELv1_2.S19...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S255.g06210.01.t

Possible name(s)

ATAD5; CHTF18; RFC1

Gene model

Phmamm.CG.MTP2014.S255.g06210

Location

S255 [85,948 / 92,584]

Sequences

Amino acid sequence

Length: 545

>Phmamm.CG.MTP2014.S255.g06210.01.p
MADDGFDELAYYESQYADDLDALDELEAIVQSEKASNVEIPEPEINNITEVDADCTDANN
KRRKLFSPAKDDFDSDLVIDEECIPLSPKRKRPRLEQRKPSMPTTLDIDRDLEIERQKEL
RDKNCLSTPQMIEKILRHRENKHSVPEFIPTETTAQKTFQLTKVLVCPPVHSDFVSATSS
DGQRVYMRMRSHEKLTSVLNSNELITGSRSLQLLPQTLPELRQSIYEKKQQERLLETQRI
TEEVRRETLGLSDNTLMNQVLSESTMTMDSENLEDEGIYSGEENSNDGLWVNKFAPTHYT
HLLSDEGVNRSLLKWLKLWDHVVFGRPIQPKKSQGKENQPKQPQEKFKKKFGKFKTDEQE
EELDEFNRPHFKISLLCGAPGLGKTTLAHIIARHAGYHVVEMNASDDRSAETFKKKLEET
TQMKSVLGTDQRPNCLIIDEIDGAPQAAINVLLNAIAQTKKQEPKKKKKKETRNFLQRPI
ICICNDLYVPSLRQLRQQSYLLQFPPTTTARLASRLRQVRSVIATTEATKLSSSVSTDNH
SKAGI

Nucleotide sequence

Length: 1,638

>Phmamm.CG.MTP2014.S255.g06210.01.t
ATGGCTGACGACGGTTTTGACGAGTTAGCTTATTACGAGTCCCAGTATGCTGATGATCTT
GATGCATTGGATGAACTAGAAGCGATTGTGCAGTCTGAAAAAGCCAGCAATGTAGAAATT
CCAGAACCCGAAATCAACAACATTACAGAGGTTGATGCAGATTGTACAGATGCTAACAAC
AAACGAAGAAAATTATTTTCCCCTGCTAAAGATGATTTTGATTCTGATTTAGTAATTGAT
GAGGAATGCATTCCTTTGTCCCCCAAAAGAAAGCGGCCACGTTTGGAACAACGAAAACCT
AGCATGCCTACCACCCTGGATATTGACAGAGACCTGGAAATAGAAAGACAAAAGGAACTA
AGAGACAAGAACTGTCTGAGCACACCACAAATGATAGAAAAGATATTGCGACACAGAGAA
AACAAACATTCTGTGCCCGAATTTATTCCTACTGAAACAACTGCTCAGAAGACTTTCCAG
CTTACAAAGGTTCTTGTCTGTCCACCAGTTCATAGTGATTTTGTTTCGGCCACATCATCC
GATGGACAGCGAGTCTACATGCGCATGCGATCACATGAAAAACTTACCTCAGTTTTGAAC
TCGAATGAACTGATCACTGGTTCGAGATCTTTACAATTGTTGCCACAAACTCTTCCTGAA
CTGAGGCAGAGTATTTATGAGAAGAAACAGCAAGAACGGCTTCTCGAAACTCAGCGAATC
ACAGAAGAAGTTCGGAGGGAGACACTTGGTCTTAGTGACAACACTTTGATGAATCAGGTT
TTATCGGAGAGTACGATGACAATGGACTCGGAAAACCTCGAAGACGAGGGAATTTATAGT
GGAGAAGAAAATTCAAACGACGGTTTGTGGGTGAACAAGTTTGCTCCGACCCACTACACA
CATTTGTTAAGTGATGAGGGTGTGAATCGTTCTTTGTTGAAATGGCTCAAACTGTGGGAC
CATGTTGTTTTTGGTCGACCAATCCAACCAAAGAAAAGTCAGGGCAAGGAAAATCAACCA
AAACAACCCCAGGAGAAGTTTAAGAAAAAGTTTGGCAAGTTTAAAACAGATGAACAAGAA
GAGGAATTGGATGAGTTCAATCGACCTCACTTCAAGATTTCATTATTATGTGGAGCTCCT
GGACTCGGCAAAACAACTCTGGCTCACATCATTGCGAGACATGCTGGATATCATGTTGTG
GAAATGAATGCCAGTGATGACAGAAGTGCAGAAACATTCAAGAAAAAACTTGAAGAAACG
ACTCAAATGAAGTCTGTACTTGGAACTGACCAAAGACCAAATTGCCTGATTATTGATGAA
ATAGATGGAGCTCCACAAGCAGCAATCAATGTTTTATTGAATGCGATCGCCCAAACCAAG
AAACAAGAACCGAAGAAGAAAAAGAAGAAAGAAACTCGTAACTTTCTACAGCGGCCGATT
ATCTGCATCTGTAATGACTTGTATGTTCCATCATTGCGACAACTGAGACAGCAAAGTTAT
CTTCTTCAGTTTCCACCAACAACCACAGCACGGCTTGCATCAAGATTGCGGCAGGTACGT
TCCGTCATTGCGACAACTGAGGCAACAAAGTTATCTTCTTCAGTTTCCACAGACAACCAC
AGCAAGGCTGGCATCTAG

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[289-518] 5.87E-24
SMART
AAA+_ATPase (IPR003593) - T[370-505] 1.1E-8
Pfam
ATPase_AAA_core (IPR003959) - T[375-485] 1.8E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CTF18_HUMAN 43.603 % 258 4.48E-76
RFC1_HUMAN 29.885 % 103 5.97E-23