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TRANSCRIPT CARD

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  1. Region 'REG00000118'
  2. Transcript 'KH2012:KH.C5.25.v1.A...'
  3. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S253.g06179.02.t

Possible name(s)

FOXD1; FOXD3; FOXD4

Location

S253 [125,031 / 127,778]

Sequences

Amino acid sequence

Length: 654

>Phmamm.CG.MTP2014.S253.g06179.02.p
MTVQTYGHMTQAEVQSARFPYQARPTPNLDLAMNYPGHQYLQQQEISQRVGGGVMRRNDA
SEQRSNTPGYSHPYRRPSHHRASPTEIGQSSSRSSTSPDNFRDISALQFMNAAVKQLQDQ
LKSSVAPMSSTAILDRYIPNGETTAETEVDVTSVSSPAPQFFDRRQIRYNAADEEREVDN
SSPESEPQNPATLLPQALTEKQDGGVSGDGKKKHVKPPYSYIALITMSILQSPDKKLTLS
GICEFIMNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTMDPDAEDMF
DNGSFLRRRKRFKRQQRDPFRDHMFAMGGASNPYGRGYGMPGNPQAAAMAAALNSYAYMN
PLPPAVPLMTPQELASRQAALLNLGSNALSQFPCGNPILNSLNSGHFPFNPAMQRESPEA
RLFAANLAIAAKSSSTQPSDNEEVQKKTKRHSPFSIESLIGKKSTEDVPPSIREEERRIS
KGSEFSLSPSSSPRAKSPVSSPSCESSSRMRMPGHSHMMKPIITSTPKFSSSSSTTSYHP
QLEDRRVDKEVSHCPPESSSHRGASPDSVISSPLPPPRIPTSMIPSSQNHLLANYDMVAK
FYQNPLASRGFFGAATNPTLPFTGFPASAQVPNPLGGAGYLPPLAGWPCFGRTT

Nucleotide sequence

Length: 1,965

>Phmamm.CG.MTP2014.S253.g06179.02.t
ATGACAGTTCAGACCTACGGACACATGACCCAAGCAGAAGTCCAATCAGCCCGTTTTCCA
TATCAAGCGCGACCGACGCCCAACTTAGACCTGGCAATGAATTACCCAGGACATCAGTAC
CTGCAACAGCAAGAGATCAGTCAACGTGTTGGGGGAGGAGTTATGCGACGAAATGATGCC
TCTGAACAACGCAGCAACACTCCAGGTTACAGCCACCCTTACAGGCGACCAAGTCATCAT
AGAGCATCGCCTACAGAGATTGGCCAGTCTTCATCGAGGTCTAGTACATCGCCGGACAAT
TTTCGGGACATCTCGGCTCTGCAGTTTATGAATGCTGCTGTGAAACAACTCCAAGACCAG
CTGAAGTCTTCAGTAGCACCGATGTCATCCACGGCTATTTTAGATCGCTATATCCCAAAC
GGAGAGACTACAGCAGAAACCGAAGTCGATGTGACCTCAGTCTCCTCCCCAGCCCCACAG
TTTTTCGATCGACGACAAATTCGCTACAACGCTGCGGACGAAGAACGTGAAGTTGACAAC
TCTTCGCCGGAATCAGAGCCCCAAAACCCGGCGACTCTCCTGCCTCAAGCGCTGACCGAA
AAACAAGATGGCGGCGTCAGCGGCGATGGCAAGAAGAAACATGTCAAGCCGCCATATTCC
TACATCGCTCTTATTACAATGTCCATTCTCCAGTCCCCGGATAAGAAACTTACTCTTAGC
GGAATCTGCGAGTTCATCATGAACAGATTTCCATACTACAGAGAGAAGTTTCCCGCCTGG
CAAAATTCAATCCGTCACAATCTTTCCTTAAACGACTGCTTTGTGAAAATTCCACGGGAA
CCTGGCAACCCTGGAAAGGGAAACTATTGGACCATGGACCCTGATGCAGAAGACATGTTC
GACAACGGTTCTTTCCTTCGCCGACGCAAGCGATTCAAGCGACAACAGCGTGACCCGTTC
CGTGACCATATGTTTGCTATGGGTGGGGCTTCGAACCCCTACGGACGGGGTTACGGAATG
CCTGGGAACCCCCAAGCAGCTGCTATGGCCGCCGCCCTTAACTCGTACGCTTACATGAAC
CCTCTGCCCCCAGCAGTACCCCTGATGACCCCACAAGAATTGGCAAGTCGCCAAGCAGCT
CTTCTGAACTTGGGTTCAAACGCATTATCTCAATTTCCTTGTGGAAACCCAATTTTGAAC
TCTCTCAACTCTGGACATTTTCCATTTAACCCTGCCATGCAACGAGAGAGCCCCGAAGCA
AGGCTCTTTGCCGCAAACTTGGCCATCGCAGCAAAGTCTTCATCCACTCAACCTAGTGAC
AATGAAGAGGTACAAAAGAAAACAAAACGACATTCGCCATTCTCAATCGAGTCCCTCATC
GGCAAGAAAAGTACCGAAGATGTCCCACCATCAATTCGGGAAGAAGAAAGGAGGATTTCT
AAAGGATCTGAATTTTCTTTGTCACCATCTTCATCGCCACGCGCCAAGAGCCCAGTATCC
TCTCCGTCTTGCGAGTCCTCCTCCAGAATGCGGATGCCAGGACACAGTCACATGATGAAA
CCAATCATCACTTCAACGCCCAAATTTTCCTCATCTTCTTCAACGACTTCGTACCATCCC
CAGCTGGAAGACAGAAGAGTTGACAAGGAGGTCAGCCATTGTCCTCCTGAATCCTCTAGC
CATAGAGGTGCCTCTCCAGATTCAGTAATCTCTTCTCCACTGCCACCACCCAGAATACCA
ACATCCATGATACCCAGCAGTCAAAATCATCTCCTAGCCAACTATGACATGGTGGCAAAG
TTTTACCAAAACCCACTTGCATCAAGAGGATTTTTCGGCGCCGCAACAAACCCCACTTTG
CCATTCACAGGGTTCCCCGCCTCAGCGCAAGTCCCTAACCCTCTTGGGGGCGCCGGGTAT
CTCCCTCCCCTGGCTGGGTGGCCTTGTTTTGGACGCACAACGTAA

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[177-311] 1.5E-45
SMART
Fork_head_dom (IPR001766) - T[214-304] 1.8E-61
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[215-310] 1.18E-39
PRINTS
Fork_head_dom (IPR001766) - T[216-229] 2.3E-22 - T[237-254] 2.3E-22 - T[260-277] 2.3E-22
ProSiteProfiles
Fork_head_dom (IPR001766) - T[216-310] 39.9
Pfam
Fork_head_dom (IPR001766) - T[216-300] 4.7E-37
CDD
Fork_head_dom (IPR001766) - T[216-293] 3.86953E-51
ProSitePatterns
TF_fork_head_CS_2 (IPR030456) - T[260-266] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FOXD4_HUMAN 55.446 % 200 1.55E-57
FOXD3_HUMAN 73.026 % 202 8.14E-58
FOXD1_HUMAN 86.17 % 185 1.21E-51