- Region 'REG00000118' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S253.g06179.02.t
Possible name(s)
FOXD1; FOXD3; FOXD4
Gene model
Location
S253 [125,031 / 127,778]
Amino acid sequence
Length: 654
>Phmamm.CG.MTP2014.S253.g06179.02.p
MTVQTYGHMTQAEVQSARFPYQARPTPNLDLAMNYPGHQYLQQQEISQRVGGGVMRRNDA
SEQRSNTPGYSHPYRRPSHHRASPTEIGQSSSRSSTSPDNFRDISALQFMNAAVKQLQDQ
LKSSVAPMSSTAILDRYIPNGETTAETEVDVTSVSSPAPQFFDRRQIRYNAADEEREVDN
SSPESEPQNPATLLPQALTEKQDGGVSGDGKKKHVKPPYSYIALITMSILQSPDKKLTLS
GICEFIMNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTMDPDAEDMF
DNGSFLRRRKRFKRQQRDPFRDHMFAMGGASNPYGRGYGMPGNPQAAAMAAALNSYAYMN
PLPPAVPLMTPQELASRQAALLNLGSNALSQFPCGNPILNSLNSGHFPFNPAMQRESPEA
RLFAANLAIAAKSSSTQPSDNEEVQKKTKRHSPFSIESLIGKKSTEDVPPSIREEERRIS
KGSEFSLSPSSSPRAKSPVSSPSCESSSRMRMPGHSHMMKPIITSTPKFSSSSSTTSYHP
QLEDRRVDKEVSHCPPESSSHRGASPDSVISSPLPPPRIPTSMIPSSQNHLLANYDMVAK
FYQNPLASRGFFGAATNPTLPFTGFPASAQVPNPLGGAGYLPPLAGWPCFGRTT
Nucleotide sequence
Length: 1,965
>Phmamm.CG.MTP2014.S253.g06179.02.t
ATGACAGTTCAGACCTACGGACACATGACCCAAGCAGAAGTCCAATCAGCCCGTTTTCCA
TATCAAGCGCGACCGACGCCCAACTTAGACCTGGCAATGAATTACCCAGGACATCAGTAC
CTGCAACAGCAAGAGATCAGTCAACGTGTTGGGGGAGGAGTTATGCGACGAAATGATGCC
TCTGAACAACGCAGCAACACTCCAGGTTACAGCCACCCTTACAGGCGACCAAGTCATCAT
AGAGCATCGCCTACAGAGATTGGCCAGTCTTCATCGAGGTCTAGTACATCGCCGGACAAT
TTTCGGGACATCTCGGCTCTGCAGTTTATGAATGCTGCTGTGAAACAACTCCAAGACCAG
CTGAAGTCTTCAGTAGCACCGATGTCATCCACGGCTATTTTAGATCGCTATATCCCAAAC
GGAGAGACTACAGCAGAAACCGAAGTCGATGTGACCTCAGTCTCCTCCCCAGCCCCACAG
TTTTTCGATCGACGACAAATTCGCTACAACGCTGCGGACGAAGAACGTGAAGTTGACAAC
TCTTCGCCGGAATCAGAGCCCCAAAACCCGGCGACTCTCCTGCCTCAAGCGCTGACCGAA
AAACAAGATGGCGGCGTCAGCGGCGATGGCAAGAAGAAACATGTCAAGCCGCCATATTCC
TACATCGCTCTTATTACAATGTCCATTCTCCAGTCCCCGGATAAGAAACTTACTCTTAGC
GGAATCTGCGAGTTCATCATGAACAGATTTCCATACTACAGAGAGAAGTTTCCCGCCTGG
CAAAATTCAATCCGTCACAATCTTTCCTTAAACGACTGCTTTGTGAAAATTCCACGGGAA
CCTGGCAACCCTGGAAAGGGAAACTATTGGACCATGGACCCTGATGCAGAAGACATGTTC
GACAACGGTTCTTTCCTTCGCCGACGCAAGCGATTCAAGCGACAACAGCGTGACCCGTTC
CGTGACCATATGTTTGCTATGGGTGGGGCTTCGAACCCCTACGGACGGGGTTACGGAATG
CCTGGGAACCCCCAAGCAGCTGCTATGGCCGCCGCCCTTAACTCGTACGCTTACATGAAC
CCTCTGCCCCCAGCAGTACCCCTGATGACCCCACAAGAATTGGCAAGTCGCCAAGCAGCT
CTTCTGAACTTGGGTTCAAACGCATTATCTCAATTTCCTTGTGGAAACCCAATTTTGAAC
TCTCTCAACTCTGGACATTTTCCATTTAACCCTGCCATGCAACGAGAGAGCCCCGAAGCA
AGGCTCTTTGCCGCAAACTTGGCCATCGCAGCAAAGTCTTCATCCACTCAACCTAGTGAC
AATGAAGAGGTACAAAAGAAAACAAAACGACATTCGCCATTCTCAATCGAGTCCCTCATC
GGCAAGAAAAGTACCGAAGATGTCCCACCATCAATTCGGGAAGAAGAAAGGAGGATTTCT
AAAGGATCTGAATTTTCTTTGTCACCATCTTCATCGCCACGCGCCAAGAGCCCAGTATCC
TCTCCGTCTTGCGAGTCCTCCTCCAGAATGCGGATGCCAGGACACAGTCACATGATGAAA
CCAATCATCACTTCAACGCCCAAATTTTCCTCATCTTCTTCAACGACTTCGTACCATCCC
CAGCTGGAAGACAGAAGAGTTGACAAGGAGGTCAGCCATTGTCCTCCTGAATCCTCTAGC
CATAGAGGTGCCTCTCCAGATTCAGTAATCTCTTCTCCACTGCCACCACCCAGAATACCA
ACATCCATGATACCCAGCAGTCAAAATCATCTCCTAGCCAACTATGACATGGTGGCAAAG
TTTTACCAAAACCCACTTGCATCAAGAGGATTTTTCGGCGCCGCAACAAACCCCACTTTG
CCATTCACAGGGTTCCCCGCCTCAGCGCAAGTCCCTAACCCTCTTGGGGGCGCCGGGTAT
CTCCCTCCCCTGGCTGGGTGGCCTTGTTTTGGACGCACAACGTAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[177-311] 1.5E-45 |
| SMART |
Fork_head_dom (IPR001766) - T[214-304] 1.8E-61 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[215-310] 1.18E-39 |
| PRINTS |
Fork_head_dom (IPR001766) - T[216-229] 2.3E-22 - T[237-254] 2.3E-22 - T[260-277] 2.3E-22 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[216-310] 39.9 |
| Pfam |
Fork_head_dom (IPR001766) - T[216-300] 4.7E-37 |
| CDD |
Fork_head_dom (IPR001766) - T[216-293] 3.86953E-51 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[260-266] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXD4_HUMAN | 55.446 % | 200 | 1.55E-57 |
| FOXD3_HUMAN | 73.026 % | 202 | 8.14E-58 |
| FOXD1_HUMAN | 86.17 % | 185 | 1.21E-51 |