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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  4. Transcript 'KH2012:KH.C7.696.v1....' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2521.g16772.01.t

Possible name(s)

NLRP13; RNH1

Gene model

Phmamm.CG.MTP2014.S2521.g16772

Location

S2521 [5,948 / 8,571]

Sequences

Amino acid sequence

Length: 214

>Phmamm.CG.MTP2014.S2521.g16772.01.p
MIQRFVLSGVKFRDEGTKAVSGCIPHVEQLKIERCNITQNGIPHIAEKLSELDEPITELK
LGGNKLTDVGAERLAPGISHIKQLHLDDCGITHVGVEKVVQYLLLRSEPMDLLNLSGNKV
GNEGAKSLATGLDKIKKLILLICNITGQGVLELATKAKELEHKMDLLDLSENEVGEEAVQ
ALSLCKGKVDKLKLQFCEVSVHQKEQLKDMDVEY

Nucleotide sequence

Length: 645

>Phmamm.CG.MTP2014.S2521.g16772.01.t
ATGATCCAGAGGTTTGTCCTTTCTGGTGTCAAGTTCAGAGATGAGGGAACCAAAGCAGTC
TCTGGTTGTATTCCCCATGTCGAACAACTGAAAATCGAGAGATGTAACATCACACAAAAT
GGAATTCCACACATTGCTGAGAAACTGTCTGAACTAGATGAACCGATAACTGAACTGAAA
CTTGGTGGAAACAAGCTGACCGATGTTGGCGCAGAACGTCTTGCTCCAGGCATCTCTCAT
ATCAAGCAGCTACATCTTGATGACTGTGGCATCACCCATGTTGGTGTGGAGAAAGTGGTT
CAGTACTTGCTTCTCCGTTCTGAACCGATGGACTTGTTGAACCTTTCTGGGAATAAAGTC
GGCAATGAAGGCGCTAAATCGCTCGCTACAGGTTTGGACAAGATAAAGAAACTCATCTTG
CTCATTTGCAACATCACAGGGCAGGGTGTGTTGGAACTTGCAACAAAAGCAAAAGAACTG
GAACATAAGATGGATTTGCTTGATTTATCTGAAAATGAGGTTGGAGAGGAAGCTGTTCAA
GCATTGTCACTTTGTAAAGGGAAAGTGGACAAACTGAAGCTTCAGTTTTGCGAGGTTTCA
GTTCACCAGAAAGAACAGCTGAAAGACATGGATGTGGAGTATTGA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[1-214] 1.1E-32
Pfam
Leu-rich_rpt (IPR001611) - T[56-75] 0.011 - T[79-98] 0.37 - T[113-129] 0.0021

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value