- Transcript 'Cisavi.CG.ENS81.R85....' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S251.g06153.01.t
Possible name(s)
FOXG1; FOXI1; FOXL1
Gene model
Location
S251 [111,539 / 117,727]
Amino acid sequence
Length: 907
>Phmamm.CG.MTP2014.S251.g06153.01.p
MHESLPMGHHHSPKGGSNTPIGSVESAGSLYSNERNEDNLSDGGASSHSPEPFVKISPQS
NPEIEPSYDPDLPLKRSLSSEAMQQQQQRSAGHVIAAARRHSDDMKAAMTSIAGTQGGIS
PEIKVAAGFPTASAMSSAVAAYTSHPYDAINSNSIAAMAAGMGLPTMIPATTSITTAMPG
LVPAAAANFKLQGSKPEDKTPNGFHNARGIIGSSGGQNRMPPSSPSPEERSQYKRPPHTY
PALIASAILDSPGKLITLRGIYDYIMNNFPYYKYCHDKSAWQNSIRHNLSLNQCFVKVPR
YENAAKSNYWTMTREGFGEFGNENSFKRRRRRGAALQPISAYKNKKYQNDGSSGGRKNKN
NHQDDAARHNTPASKQDIPVVATSAGVYSMPFPPQLMAMTAGAWPQADGSYHVTDDVTRQ
LGRKRSQSPPDKDASKQPRMMVLKQGEGPNLVEEMQGTLNSFSKALIDSPMLAKSSRKRD
EAQLLATSTQPWIAAAQKSLMASSGILLPSLMPDRMTSSPERNGFDGQRREDGTYASNES
PVLVDGVDVSRPHPGSPLGGGGSDVTIRYETSEIPIHHYRCRFCPYTYVSSGAALLEQHA
RVLHQLEITNLKAKAVAAAVASSQAEQTASESVSAKDASDRLLSLQNMVSGLNPRSIGVP
SQTNMLAAAQVSAANGTTTSGFPYSGSFASGLLDESMMRSLAQQVNQQRDVNGGHDNGVD
AYAYQRQQMLNSALQQAAAASSASVSQEQLRLFYQQLAMHNPFLNSQANPAFTNGFPRQL
SGTETDQASQLKHHFWQYQQKLLELSQNKSGEEETRSNSGDNRPNSQPAAETSTSPQHCR
SPHAAADAESEMKKNIHGWKQCGQCDFHAKGVHGLEQHCRKTHAKTAMTSPTDDVKDAAA
GPNLEMQ
Nucleotide sequence
Length: 2,724
>Phmamm.CG.MTP2014.S251.g06153.01.t
ATGCACGAGTCCTTACCCATGGGGCACCATCACAGCCCAAAAGGTGGGTCAAACACCCCA
ATTGGGTCAGTCGAGTCAGCTGGTAGTCTTTACAGCAACGAAAGAAATGAAGACAATCTT
TCAGATGGCGGGGCTTCCTCGCACAGCCCAGAACCATTTGTGAAAATCTCGCCCCAAAGT
AACCCCGAGATCGAGCCCAGTTATGACCCAGATTTGCCTCTTAAGCGTTCTTTGTCGTCG
GAAGCCATGCAACAACAGCAGCAGCGATCTGCCGGCCACGTCATCGCCGCAGCACGACGT
CACAGTGACGACATGAAAGCAGCGATGACGTCGATCGCGGGAACGCAAGGAGGGATTTCC
CCGGAAATAAAAGTCGCAGCTGGTTTTCCGACCGCCAGCGCAATGTCATCGGCGGTAGCG
GCTTATACGAGTCATCCTTATGACGCAATAAACAGCAACTCGATCGCAGCGATGGCAGCG
GGCATGGGCCTTCCCACGATGATCCCAGCCACAACTTCAATAACCACTGCAATGCCTGGT
CTCGTCCCAGCAGCTGCGGCAAATTTTAAGCTGCAAGGCTCGAAACCTGAAGACAAAACC
CCGAATGGGTTTCACAATGCAAGAGGAATCATTGGGTCCAGCGGGGGCCAAAACCGAATG
CCCCCAAGCAGCCCCTCCCCTGAAGAGCGGTCCCAATACAAGCGACCCCCTCACACTTAC
CCAGCCCTTATAGCATCGGCAATTCTCGACAGTCCCGGAAAGTTGATCACCCTTCGTGGC
ATCTACGACTATATAATGAACAATTTTCCCTACTACAAATACTGCCACGACAAGTCGGCC
TGGCAAAACTCGATCCGTCACAACTTGAGTCTCAACCAGTGCTTCGTCAAAGTTCCGAGG
TATGAGAACGCTGCAAAATCGAACTACTGGACAATGACTCGCGAAGGTTTTGGCGAGTTT
GGAAACGAAAATAGCTTCAAGCGCAGAAGACGACGAGGTGCGGCTTTGCAGCCAATCTCA
GCTTACAAGAACAAGAAATATCAAAACGACGGCTCCAGTGGAGGGCGCAAGAACAAGAAT
AACCATCAGGATGATGCCGCTCGCCACAACACCCCCGCCAGCAAACAGGATATCCCCGTT
GTAGCGACCTCTGCTGGCGTTTATTCTATGCCGTTTCCACCTCAGCTGATGGCAATGACC
GCCGGCGCGTGGCCCCAAGCCGACGGCAGCTATCACGTCACCGATGACGTCACACGCCAG
CTGGGGAGGAAGCGATCGCAGAGCCCGCCCGATAAAGATGCTTCGAAGCAGCCTCGAATG
ATGGTTCTTAAGCAAGGGGAAGGACCAAACTTAGTTGAGGAGATGCAGGGAACTTTGAAC
TCGTTCAGCAAGGCTCTCATCGACTCTCCGATGCTCGCCAAGTCATCCAGGAAGAGAGAT
GAGGCTCAGCTCCTTGCAACATCAACCCAGCCATGGATCGCAGCAGCACAGAAGAGCCTT
ATGGCATCATCAGGAATTCTTCTTCCATCTTTGATGCCAGACCGAATGACGTCATCACCA
GAACGTAATGGTTTCGATGGGCAACGTAGAGAAGATGGCACTTACGCATCCAACGAGAGC
CCGGTGTTGGTCGACGGAGTGGATGTAAGTCGTCCCCACCCCGGAAGCCCGTTGGGGGGG
GGGGGCAGTGACGTCACCATCCGCTACGAGACTTCGGAAATTCCGATTCACCACTACAGG
TGTCGTTTCTGCCCCTACACCTACGTCAGTTCCGGCGCGGCCCTGCTGGAGCAGCACGCT
AGGGTTTTGCATCAACTTGAGATCACCAACTTGAAAGCCAAAGCCGTCGCAGCAGCGGTT
GCCAGCTCCCAAGCTGAACAGACGGCATCCGAGAGTGTCAGTGCAAAAGATGCTTCCGAC
CGTCTATTGTCTCTGCAAAATATGGTATCCGGCCTTAACCCGCGTTCGATTGGAGTTCCC
AGTCAAACAAACATGCTTGCAGCGGCCCAAGTATCAGCTGCAAACGGAACTACCACTTCC
GGGTTCCCATACTCCGGTAGCTTCGCTTCCGGCCTTCTCGACGAATCAATGATGAGGTCC
CTTGCGCAGCAAGTCAACCAACAACGTGACGTCAACGGTGGCCATGACAACGGCGTCGAC
GCTTACGCTTACCAACGCCAGCAGATGCTGAACTCTGCTCTACAGCAAGCAGCAGCCGCT
TCATCGGCATCAGTCTCCCAAGAACAACTTCGGCTCTTCTATCAACAACTGGCGATGCAC
AATCCCTTCCTTAACTCGCAGGCAAACCCGGCGTTCACCAACGGCTTCCCGCGCCAGCTC
TCAGGCACTGAAACCGATCAAGCTTCTCAGCTGAAGCATCATTTCTGGCAGTACCAGCAG
AAGCTTCTGGAACTCTCACAGAACAAATCTGGTGAGGAAGAAACGCGATCGAACTCCGGT
GACAACCGTCCCAACTCACAACCAGCTGCAGAAACTTCCACATCTCCGCAGCACTGCAGG
AGTCCTCACGCAGCGGCGGATGCAGAGTCCGAGATGAAAAAGAACATTCACGGATGGAAA
CAATGCGGCCAGTGCGACTTCCACGCCAAAGGTGTACACGGTCTCGAGCAACACTGCAGG
AAGACGCACGCCAAAACAGCGATGACGTCACCAACTGATGACGTCAAGGACGCGGCAGCA
GGACCTAACTTGGAAATGCAGTAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[224-332] 1.6E-33 |
| SMART |
Fork_head_dom (IPR001766) - T[233-324] 3.6E-36 |
| Pfam |
Fork_head_dom (IPR001766) - T[234-315] 1.7E-30 |
| CDD |
Fork_head_dom (IPR001766) - T[235-313] 5.90851E-37 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[235-331] 31.944 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[235-330] 1.13E-29 |
| PRINTS |
Fork_head_dom (IPR001766) - T[235-248] 4.2E-18 - T[256-273] 4.2E-18 - T[281-298] 4.2E-18 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[281-287] . |
| SMART |
Znf_C2H2_type (IPR013087) - T[579-604] 7.5 - T[860-883] 11.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXG1_HUMAN | 54 % | 111 | 9.8E-26 |
| FOXI1_HUMAN | 52.294 % | 109 | 1.17E-25 |
| FOXL1_HUMAN | 51.485 % | 107 | 6.23E-25 |