- Clone 'AHC0AAA98YK24' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S248.g06111.01.t
Possible name(s)
HMCN1; MYLK; TTN
Gene model
Location
S248 [94,062 / 111,123]
Amino acid sequence
Length: 1,621
>Phmamm.CG.MTP2014.S248.g06111.01.p
MEVYGTHSLVISRTEAADSGVYSITASNHVGSDSCSAQLHIQDIATSRGSSSSQLSAYGI
STSSDRSSPNTSNLSSPSLSPKLGRAITSRPVSGNSSPWASGVKTGGGGPPPRRRGPGFI
LRPRPQTAAAGDRLCLKCTLLGNPKPTVTWEKDGELVDEERTNGHIQTRNDGNDYFLEIE
ESCTDDAGKYTVTARNSLGKQTASVEVTITGGSPSVKTTKGKSSPATNNKSNHVANDNAT
HDATPNSNKNISSTAQPGDENVRPARIGELILPSNAKPDDSKDSPTGSISSTMSSHSRIS
TSSSRSNASVKHEQEAAEKEEHTAPASSYTRSSRSWRRSYVAPTFTRRLSSTQVLEGEEL
LLQCEVSGEPEPELRWMRNGIEVGIDEDEVFTSFRNGIARLRLRDLQATHAGEYICKARN
EAGVIQCSSRVTVKVKPVVTRPRFLRALSDVRVTEGDTLTLEAEVDGSPTPEILWSLDGE
EISNAECSFNKSIAKLTVYNVTHARSGQYMCNALNSGGEDSVACRVRVKAKKTDITPEFT
APLSDVKAVENDDVCLRCMVTGIPEPSVKWMYNEELLEPEEGVEISYHDGVAALTLEQAT
DEDTGTYTCVAVNSEGQAKTSCQVSVTAAKKPEKKAAPSSPPKFTTLFDEYLRTQEGDTL
TLECTISGSPLPSVKWTANDQPLEEATSEVNGDKVQLVINPVTSSHSGHVKCTIQNSAGT
ASHEARIYVRSKRVAPSFDTDLPSTIEVQEGAEASFECRVTGHPQPRVTWTRDGRSLSIL
TTETTYEDGVAAVRIRKAGPREGGKYICTARNLSGESQSICTVIVSQQKKEETPKKPTKS
APSFTKQLGDMTLEDGQDLKLICNVTGTPTPEITWFLDGLPLEAEDGDATFSDGVAMMVL
EDVMQDDSGKYKCVATNSAGSVETSCKVTVKGPAKKEPETPKDTDPSFPIVLEDKTIKEG
DDIVLKCKVIGQPRPKITWLLDGEEILDAELKYEEDGNIELLLPEALPEDEGVYTCIAEN
PLKRVMSSCTVTIEAPPKQPKKKSAPAPKQDEPVAKPVDVSPAKKTGSQVKPAFIDGLTD
VTVADGSTSFKLSCKVEGKPSPVARWFFDGEEKENNEDFRIVSSGDDRTLIFTEVFPEDS
GTYSCVISNSAGEATSKCKITVEEIDGEAPSFIMKPKPVNVNGGEKAVFSCRVDGDPSPS
VQWLFCNRPIQDLDRIHISEANQSNNYTHSLEIPIVSPQDAGRYSACCRNLLGDVTCTVS
LIVSDAKRQDACTDFRGVLKKTKSPTSPKATSEEQVDFRSVLRSTSADRDLGRRGDSTGS
ENSGEDPGMIYKEALTTTVKTKALTEEERKRMKAEQKDFRSNLVRTVVNPEHAETKTDVK
SRGPEQKDFRDEALKTKVQTKALGQEDYKIMHGEQKDFRSETIKSKVVTKSYNEDLVKAK
RAEQKDFRNVLSPTKREGDEDKHKDTEHGGTLKLAELPKAKWKKGSTMDHNTVATKRSRR
REVVPERKIQQNGDEQDEEPVGTKPQFVQPLADMENKDGEPFELVCHVTGEPRPEITWFL
EDEEVKAEADIAITYEGDVCRLSVTESFPEDQGRYSCTARNDHGQVTCSCYVTVLTEGES
A
Nucleotide sequence
Length: 4,866
>Phmamm.CG.MTP2014.S248.g06111.01.t
ATGGAGGTATACGGAACTCACAGTCTTGTAATTTCGCGTACTGAAGCTGCAGACAGCGGG
GTATATTCGATAACTGCCTCCAATCACGTCGGCTCCGATTCCTGTTCTGCTCAACTCCAT
ATACAAGATATCGCAACCTCTCGTGGATCTTCAAGCAGTCAACTTTCTGCTTACGGAATC
AGCACCAGTTCAGACCGTAGCAGTCCCAATACTTCGAACCTAAGTTCCCCGTCACTTTCA
CCAAAGCTGGGCAGGGCAATAACCTCAAGACCCGTATCAGGAAATTCTTCGCCATGGGCG
TCTGGGGTAAAAACCGGGGGCGGTGGACCTCCACCAAGACGACGGGGCCCTGGGTTCATT
CTTAGACCAAGACCCCAAACAGCAGCGGCGGGGGACAGACTTTGCCTTAAGTGTACGTTG
CTTGGCAACCCGAAGCCAACAGTCACGTGGGAAAAGGATGGCGAGCTGGTGGATGAAGAG
CGAACCAACGGTCACATACAGACTCGTAACGATGGCAACGATTATTTCCTGGAGATCGAG
GAAAGTTGTACAGACGATGCGGGAAAATACACGGTCACTGCCAGAAATTCACTGGGAAAG
CAGACGGCTTCGGTGGAGGTTACTATTACTGGAGGATCCCCTAGCGTAAAGACGACTAAG
GGCAAATCTTCTCCTGCAACCAACAATAAGAGCAACCACGTGGCCAACGACAATGCAACA
CATGACGCGACACCCAACAGCAACAAAAACATTAGCTCCACAGCGCAACCTGGCGACGAA
AACGTACGACCAGCGCGAATCGGCGAGCTCATCCTTCCGTCGAACGCTAAACCGGATGAC
AGCAAGGATTCTCCCACCGGATCAATTTCGTCGACTATGTCGTCACACTCTCGCATATCT
ACGTCATCTTCACGGTCCAATGCGTCGGTTAAACATGAGCAAGAGGCGGCGGAAAAGGAG
GAACACACTGCTCCTGCGAGCTCCTACACCAGGAGCAGCAGAAGTTGGAGACGTAGTTAC
GTTGCACCAACTTTCACAAGGAGATTGTCGAGTACACAAGTATTGGAGGGCGAGGAACTG
CTCCTCCAGTGTGAAGTATCTGGAGAACCGGAGCCGGAACTAAGATGGATGAGGAACGGA
ATAGAGGTTGGCATTGATGAGGACGAGGTCTTCACATCATTCAGGAACGGCATAGCTAGA
TTGAGACTGAGAGACTTGCAGGCTACCCATGCTGGAGAATATATCTGTAAAGCAAGAAAC
GAAGCTGGGGTTATTCAATGCAGCAGTCGTGTGACTGTAAAAGTGAAACCGGTGGTGACC
CGTCCTCGCTTCTTGAGAGCCCTTTCTGACGTCAGAGTAACGGAGGGAGATACCCTAACG
TTGGAGGCTGAGGTAGATGGAAGTCCAACTCCTGAAATATTGTGGTCTTTGGATGGCGAG
GAAATATCCAATGCCGAGTGCTCGTTCAACAAAAGCATTGCTAAACTTACTGTTTACAAT
GTGACACATGCACGCAGTGGCCAGTACATGTGTAACGCACTGAACTCTGGCGGTGAAGAT
TCGGTCGCCTGCAGAGTCCGAGTAAAAGCCAAGAAAACTGACATTACTCCGGAGTTCACC
GCCCCCTTGTCTGACGTAAAAGCAGTGGAGAACGATGACGTATGCTTACGTTGCATGGTA
ACCGGAATTCCAGAACCTTCTGTGAAGTGGATGTACAACGAAGAGCTTTTGGAGCCGGAG
GAAGGAGTTGAAATTAGTTACCATGACGGAGTAGCTGCTTTGACATTGGAACAAGCCACA
GACGAAGATACTGGAACTTACACTTGTGTGGCTGTAAATAGCGAAGGACAAGCAAAAACT
TCCTGCCAAGTATCTGTTACTGCTGCAAAGAAACCAGAGAAGAAAGCTGCTCCGAGTTCA
CCACCCAAGTTCACCACCCTGTTTGACGAGTACCTTCGTACACAAGAGGGCGACACACTC
ACCTTGGAATGCACGATTTCAGGAAGCCCTCTTCCATCCGTGAAGTGGACCGCCAACGAT
CAACCGCTGGAAGAAGCCACGAGTGAAGTTAATGGTGACAAGGTACAATTGGTGATAAAT
CCTGTTACGTCATCGCACAGTGGTCACGTGAAATGTACAATCCAGAATTCAGCGGGTACT
GCATCCCATGAGGCGAGGATATATGTCCGTTCAAAACGAGTGGCACCATCTTTTGACACT
GATCTTCCATCAACTATCGAAGTCCAAGAAGGAGCTGAAGCATCGTTTGAATGTCGGGTC
ACAGGTCATCCGCAGCCACGCGTGACCTGGACACGTGACGGACGGTCGCTGAGTATTCTG
ACAACAGAAACAACATACGAAGATGGTGTCGCTGCTGTTCGTATTCGCAAAGCTGGTCCA
AGAGAAGGTGGCAAGTACATCTGCACTGCTCGAAATTTGTCTGGCGAATCGCAGTCGATC
TGCACCGTTATCGTGAGTCAGCAAAAAAAGGAGGAAACTCCTAAAAAACCAACGAAGTCA
GCACCAAGTTTCACTAAACAACTCGGCGATATGACACTTGAGGACGGACAGGATTTGAAG
TTGATCTGCAACGTCACTGGCACGCCGACCCCCGAAATCACGTGGTTTTTGGATGGACTT
CCGCTAGAGGCAGAAGACGGAGATGCAACTTTCAGTGATGGAGTAGCGATGATGGTGTTG
GAAGATGTGATGCAGGATGACTCAGGAAAATACAAGTGTGTTGCAACCAACAGTGCCGGA
TCAGTCGAAACTTCATGCAAAGTGACAGTTAAGGGACCAGCAAAGAAAGAACCAGAAACA
CCAAAGGATACGGACCCGTCTTTTCCTATCGTGCTTGAAGATAAGACGATCAAGGAAGGC
GATGATATTGTGCTCAAATGCAAAGTGATAGGCCAGCCAAGACCAAAGATCACATGGCTT
TTGGACGGAGAGGAAATTCTAGATGCTGAACTTAAGTATGAAGAAGACGGTAACATCGAA
TTGCTTTTACCAGAAGCTTTGCCCGAGGATGAAGGCGTCTACACTTGTATTGCTGAGAAC
CCACTCAAGCGTGTCATGAGCTCATGCACAGTGACCATTGAAGCGCCACCAAAACAACCC
AAAAAGAAAAGCGCACCAGCGCCGAAACAAGACGAACCAGTCGCAAAACCTGTTGACGTT
TCGCCAGCTAAAAAGACGGGATCTCAAGTCAAGCCAGCATTTATTGACGGTTTGACCGAC
GTTACTGTAGCCGATGGAAGCACCAGCTTTAAACTTTCCTGCAAAGTTGAAGGAAAACCA
TCTCCAGTTGCTCGTTGGTTCTTTGATGGCGAGGAAAAAGAAAACAATGAGGACTTTCGG
ATCGTTTCATCTGGTGATGACAGGACCTTGATATTTACCGAAGTCTTCCCAGAAGATTCT
GGAACCTACAGCTGTGTTATCAGCAACAGTGCCGGTGAAGCTACGTCCAAATGTAAAATC
ACCGTGGAAGAGATTGATGGCGAAGCACCGTCATTCATTATGAAACCAAAACCAGTGAAT
GTGAATGGTGGAGAGAAGGCTGTTTTCAGCTGTCGTGTGGACGGTGACCCATCACCATCA
GTTCAATGGCTATTCTGCAACCGTCCAATCCAAGATCTTGACCGCATCCATATATCCGAA
GCCAACCAATCAAATAATTACACGCATTCGTTGGAAATTCCAATTGTGTCGCCTCAGGAC
GCTGGGAGATATTCTGCTTGTTGCAGGAACCTGCTTGGTGACGTCACATGCACAGTTTCG
CTGATCGTGAGCGACGCCAAGCGACAGGATGCCTGTACAGATTTTCGGGGTGTTCTGAAG
AAAACAAAATCACCAACGTCACCCAAAGCGACTTCGGAGGAGCAGGTTGACTTCCGTTCT
GTGTTGAGGAGCACTTCAGCCGACCGAGACTTGGGAAGAAGGGGTGATTCGACCGGATCC
GAAAACTCGGGCGAGGACCCTGGAATGATCTACAAGGAAGCTTTAACTACTACCGTGAAA
ACGAAAGCTCTCACTGAAGAGGAAAGAAAACGTATGAAAGCGGAACAGAAAGATTTCAGA
TCGAATCTTGTTCGTACTGTTGTAAATCCTGAACACGCAGAGACGAAAACCGATGTAAAA
AGTCGAGGACCGGAACAAAAAGACTTCCGGGACGAAGCGTTGAAGACTAAAGTGCAGACC
AAGGCATTGGGTCAAGAAGATTACAAAATCATGCACGGAGAACAAAAGGACTTTAGATCA
GAAACTATCAAAAGCAAAGTTGTCACTAAGTCGTACAACGAGGATTTGGTGAAGGCAAAA
CGCGCCGAACAAAAGGATTTCCGGAACGTTCTTTCTCCGACTAAACGCGAAGGGGATGAG
GATAAGCATAAAGATACGGAGCATGGAGGTACATTGAAACTAGCGGAACTGCCGAAAGCA
AAATGGAAGAAGGGATCAACCATGGACCACAACACAGTAGCAACAAAACGTTCACGTCGT
CGGGAAGTTGTCCCTGAGAGGAAGATCCAGCAAAATGGCGATGAACAGGACGAGGAACCA
GTTGGAACTAAACCTCAGTTTGTTCAACCTTTGGCTGATATGGAGAACAAAGACGGTGAA
CCGTTCGAGCTTGTTTGTCACGTGACTGGAGAGCCAAGGCCCGAGATCACGTGGTTTCTT
GAGGATGAAGAAGTAAAGGCCGAAGCCGATATTGCTATCACATACGAAGGGGATGTGTGC
CGACTGTCTGTGACGGAGAGCTTTCCAGAGGACCAGGGTAGATACAGTTGCACAGCCCGG
AACGACCACGGGCAGGTTACGTGCTCGTGTTACGTCACAGTGCTTACTGAGGGTGAGTCG
GCGTGA
| Gene3D |
Ig-like_fold (IPR013783) - T[2-43] 5.5E-7 - T[112-213] 2.1E-20 - T[336-439] 5.2E-23 - T[440-533] 1.1E-19 - T[534-637] 3.8E-25 - T[638-734] 1.1E-19 - T[735-834] 9.7E-19 - T[835-940] 2.2E-25 - T[941-1048] 2.8E-22 - T[1066-1166] 5.0E-24 - T[1167-1273] 1.4E-20 - T[1522-1614] 6.4E-24 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[5-43] 9.85E-8 - T[117-211] 3.42E-20 - T[343-438] 5.17E-23 - T[442-531] 6.0E-19 - T[537-631] 5.59E-24 - T[642-733] 1.54E-17 - T[732-825] 3.81E-17 - T[842-933] 1.95E-22 - T[946-1041] 1.89E-20 - T[1072-1165] 1.05E-21 - T[1170-1266] 2.82E-19 - T[1525-1615] 3.09E-23 |
| Pfam |
Ig_I-set (IPR013098) - T[5-41] 2.3E-5 - T[118-209] 2.4E-19 - T[343-433] 6.0E-16 - T[442-528] 9.8E-17 - T[537-626] 1.2E-20 - T[642-727] 7.5E-15 - T[737-825] 1.2E-16 - T[842-930] 5.4E-20 - T[946-1033] 3.4E-16 - T[1072-1162] 3.0E-18 - T[1170-1263] 3.0E-16 - T[1525-1614] 3.2E-20 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[117-210] 11.787 - T[343-432] 15.054 - T[442-523] 11.17 - T[537-625] 14.528 - T[642-728] 13.058 - T[736-826] 13.82 - T[842-929] 15.635 - T[946-1032] 14.11 - T[1072-1161] 15.0 - T[1170-1264] 10.154 - T[1525-1613] 13.185 |
| SMART |
Ig_sub (IPR003599) - T[123-210] 3.1E-8 - T[349-434] 1.7E-10 - T[448-529] 1.1E-7 - T[543-627] 4.6E-11 - T[649-730] 4.2E-8 - T[743-826] 1.6E-9 - T[848-931] 1.4E-10 - T[952-1034] 7.4E-10 - T[1078-1163] 5.1E-7 - T[1176-1264] 1.5E-7 - T[1531-1615] 1.2E-6 |
| SMART |
Ig_sub2 (IPR003598) - T[129-199] 3.5E-8 - T[355-423] 2.3E-12 - T[454-518] 1.9E-6 - T[549-616] 2.4E-12 - T[655-719] 4.3E-10 - T[749-815] 5.1E-8 - T[854-920] 6.7E-14 - T[958-1023] 1.9E-14 - T[1085-1152] 1.9E-9 - T[1182-1253] 0.002 - T[1537-1604] 3.1E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 25.216 % | 273 | 1.33E-73 |
| TITIN_HUMAN | 25.49 % | 298 | 3.98E-81 |
| MYLK_HUMAN | 31.873 % | 347 | 3.1E-97 |