- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S248.g06109.01.t
Possible name(s)
ZNF235; ZNF85
Gene model
Location
S248 [36,984 / 37,935]
Amino acid sequence
Length: 302
>Phmamm.CG.MTP2014.S248.g06109.01.p
MRIHTREKPHQCQICNKTFRTKSMLTAHIKLHSDAKPFKCEFCGKTFKQASNCKIHKLIH
KEKQYLHTHSLIHTGIKPFECDLCDKRFSTRCNLKIHQSVHTEEKPFQCDLCGKTFSSKP
GKKHHMMIHTGDRPHKCDVCDKRFVLAGALKQHRLIHTGEKPFKCHVCGRQFRNKHHLKR
HSLTHSGEKPFECHICKKRLTTKIVLRDHLNIHAGEKPYACHICEKRFRTRANLRVHYVV
HSDQMPFMCEICKKRFKTKKELKRHAATHNEQKNYKCSVCNKRFKTPGYVSKHMIVHTGK
KP
Nucleotide sequence
Length: 909
>Phmamm.CG.MTP2014.S248.g06109.01.t
ATGAGAATACATACTCGTGAAAAGCCTCACCAATGCCAAATTTGCAACAAAACATTTAGG
ACAAAAAGTATGTTAACGGCTCATATAAAACTTCACAGCGACGCAAAACCCTTTAAATGT
GAATTCTGCGGCAAGACGTTTAAACAGGCATCAAACTGCAAAATTCATAAGCTGATTCAC
AAGGAAAAACAGTACCTACACACTCATTCGTTAATTCATACCGGGATTAAACCCTTTGAG
TGCGATTTATGTGACAAACGCTTTAGTACAAGGTGCAATTTGAAAATTCACCAGTCGGTT
CACACCGAAGAGAAGCCGTTCCAGTGTGATTTATGTGGAAAAACTTTTAGCTCAAAGCCG
GGCAAAAAACATCACATGATGATACATACTGGAGACCGGCCTCACAAATGTGATGTGTGT
GACAAAAGATTCGTTTTGGCCGGAGCTCTCAAGCAACACCGACTGATCCACACTGGTGAA
AAACCATTTAAGTGTCATGTTTGTGGAAGACAATTTCGTAACAAACACCATCTAAAACGC
CACTCTCTGACCCATTCCGGTGAAAAACCGTTTGAATGTCATATTTGTAAGAAGAGACTA
ACAACGAAGATCGTTTTAAGAGACCATCTCAACATTCACGCTGGTGAAAAACCTTACGCC
TGTCATATTTGTGAAAAACGTTTTAGAACGAGAGCCAACCTTCGTGTACATTACGTGGTT
CACAGCGACCAGATGCCCTTTATGTGCGAGATTTGTAAAAAGCGTTTCAAAACGAAAAAA
GAATTGAAACGACATGCAGCTACACACAACGAACAGAAGAATTACAAATGTAGTGTTTGT
AACAAACGCTTCAAAACTCCTGGATATGTGAGCAAGCATATGATTGTACACACCGGCAAG
AAACCTTAG
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[4-56] 5.1E-17 - T[63-116] 2.36E-19 - T[104-163] 8.43E-20 - T[172-228] 2.55E-17 - T[213-265] 5.41E-16 - T[256-302] 2.88E-11 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[10-37] 13.775 - T[38-65] 11.427 - T[79-106] 15.105 - T[107-134] 14.607 - T[135-162] 14.44 - T[163-190] 16.02 - T[191-218] 13.027 - T[219-246] 13.11 - T[247-274] 11.988 - T[275-302] 14.295 |
| SMART |
Znf_C2H2_type (IPR013087) - T[10-32] 6.5E-4 - T[38-60] 0.0085 - T[79-101] 0.0018 - T[107-129] 2.4E-4 - T[135-157] 0.0047 - T[163-185] 0.014 - T[191-213] 0.031 - T[219-241] 0.0011 - T[247-269] 7.0E-4 - T[275-297] 1.9E-4 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[10-32] 2.4E-6 - T[38-60] 0.01 - T[79-101] 2.9E-4 - T[135-157] 0.013 - T[163-185] 0.0011 - T[219-241] 1.4E-4 - T[247-269] 5.3E-5 - T[275-297] 8.0E-5 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[12-32] . - T[40-60] . - T[81-101] . - T[109-129] . - T[137-157] . - T[165-185] . - T[193-213] . - T[221-241] . - T[249-269] . - T[277-297] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN665_HUMAN | 43.354 % | 258 | 7.47E-82 |
| ZNF85_HUMAN | 43.671 % | 259 | 3.17E-82 |
| ZN235_HUMAN | 41.64 % | 276 | 1.34E-87 |
