- Transcript 'Cisavi.CG.ENS81.R131...' >
- Transcript 'KH2012:KH.S460.2.v1....' >
- Clone 'ma321h01' >
- Transcript 'Boleac.CG.SB_v3.S105...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S245.g06060.01.t
Possible name(s)
HOXA5; HOXA7; HOXB7
Gene model
Location
S245 [71,173 / 79,191]
Amino acid sequence
Length: 262
>Phmamm.CG.MTP2014.S245.g06060.01.p
CNGVSNIGRLLYFCCFANCCKNPQVLFNSTNMDRSANEFFKSKFPIASRPLLRQAMAMTF
QSHSCDVSKNPEEGVIKSAFNHNQTGYHNQQNNCNNFDPWSRAASFLPQPIANDSSSSYQ
HPNSQSIFNVSRILMGSEVEEKRDKEEKTDSEAKIYSWMLPKNAGDDDPSKRTRTAYTRY
QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKVPPPPPPPPP
PPPPPSGSQASSGNSPDGRVIN
Nucleotide sequence
Length: 1,287
>Phmamm.CG.MTP2014.S245.g06060.01.t
CTGTAATGGAGTTTCAAACATAGGAAGGCTGTTGTATTTTTGTTGTTTCGCAAATTGCTG
CAAAAATCCACAAGTGCTTTTCAATTCCACAAATATGGATCGATCTGCGAACGAGTTCTT
CAAAAGCAAATTTCCAATTGCATCAAGACCGTTGCTACGTCAGGCCATGGCTATGACGTT
TCAGTCACATTCGTGTGATGTCTCTAAAAATCCCGAAGAAGGTGTAATCAAGTCAGCGTT
CAATCACAATCAAACAGGATATCATAATCAACAGAACAACTGCAACAACTTTGATCCATG
GTCACGTGCAGCATCTTTTCTTCCCCAACCAATTGCAAACGACTCCTCGTCTTCGTATCA
GCATCCAAACTCCCAGTCCATTTTCAATGTTTCGAGGATTCTTATGGGATCAGAAGTGGA
GGAAAAACGGGACAAGGAAGAGAAGACCGACTCCGAAGCAAAGATTTACTCCTGGATGCT
TCCAAAGAACGCTGGTGACGACGACCCTTCAAAACGTACACGAACAGCCTACACACGATA
CCAGACTTTGGAGTTGGAAAAGGAGTTCCATTACAACCGCTACCTCACCAGGAGAAGGAG
GATTGAGATCGCGCACGCTCTTTGCCTCACTGAGAGACAGATCAAGATCTGGTTTCAGAA
CAGAAGGATGAAGTGGAAGAAGGAAAACAAGGTCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCTCGGGATCTCAGGCGTCGTCGGGGAACTCCCCAGATGGAAGAGT
AATCAATTAGTTATTTGAAAGGTTGAGATTTTAAAATGCTTCAAAAGACGATAAAGATGT
ACTTTACATTGTCTTTTTCGCTCACTTTCATTGGGTAATTTTTGTCACCTTGCTGCTTTT
ACTTCAACATTCATATGACAAAGTCAAAATTTGTTAAAAAACATCAAGTAATTGATTTTT
TTTTTCAAGTTTACAGTATGAAAACCGCAATCAATAATGGGAATAGAGCGTATGTGCAAG
TTTTTGTACGTGATTTCTATTATTTTCCCAAATATTGTTCCGCTAGGGGGAACGCACTAC
GCAATCCACTTGCCGGCAGATGTCGCTAATGATTATTTTATTTCGTTTCGTTTTGCTTCG
TCACCGAATAATTGATTATGTAAAGACGCAAATAGATTTTCTTTTTTCTAGTTTAAAATC
GTTATCCATATTCAATTATGTATGGGTAGTATTACACAACGCGCTTCTAATCTCTTCAAT
GTGATTTTGTTTTGTGTTTACGTGCAT
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[162-229] 8.55E-27 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[168-228] 21.605 |
| SMART |
Homeobox_dom (IPR001356) - T[170-232] 3.1E-26 |
| Pfam |
Homeobox_dom (IPR001356) - T[171-227] 5.1E-22 |
| CDD |
Homeobox_dom (IPR001356) - T[171-229] 1.04868E-23 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[192-203] 4.0E-9 - T[207-217] 4.0E-9 - T[217-226] 4.0E-9 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[203-226] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXA5_HUMAN | 75.309 % | 133 | 9.7E-38 |
| HXB7_HUMAN | 69.792 % | 141 | 1.33E-41 |
| HXA7_HUMAN | 72.414 % | 129 | 1.11E-36 |