Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2456.g16696.01.t

Possible name(s)

ORC1

Gene model

Phmamm.CG.MTP2014.S2456.g16696

Location

S2456 [8,389 / 11,752]

Sequences

Amino acid sequence

Length: 125

>Phmamm.CG.MTP2014.S2456.g16696.01.p
RKNKNIQTVGIEHVHEALQEMFASPMVMFIRNCSTQEKLFLRATVSEFRRSGLEEATVGQ
ILQHHVTLAKLDNLPPATVTSLIKVCNQLAASHVLLMEMGRHDLYARVRLNVSIDDVLFA
LNADS

Nucleotide sequence

Length: 1,757

>Phmamm.CG.MTP2014.S2456.g16696.01.t
AGAAAAAACAAGAACATACAAACTGTGGGAATCGAGCATGTACATGAGGCATTGCAGGAA
ATGTTTGCTTCACCTATGGTCATGTTTATTAGGAATTGCTCAACCCAAGAAAAGCTTTTC
CTGAGGGCTACAGTGTCGGAGTTTAGAAGATCAGGATTGGAGGAAGCCACTGTGGGTCAA
ATCCTTCAGCATCATGTGACACTTGCAAAACTTGACAATCTTCCCCCTGCCACAGTGACA
TCCTTAATAAAGGTTTGCAATCAACTTGCTGCTTCACATGTCCTGCTGATGGAGATGGGT
CGTCATGATTTGTATGCTCGTGTTCGATTAAATGTCAGCATTGACGATGTTTTGTTTGCG
CTCAATGCTGATTCTTAAACTGCTCTTGCTTGCTATGAAGGTGACATTTTTAGCAAAATA
TCATGTGCTACGTTGTTGCTTACTGCTGTGTAAGCGTATTTTTAGACAAGTGCTTTTCCT
AATATCACAAAATATGCATGTTATCTGCAGTTAGTGTTATATTGCTTTGGGTTCGTTATA
CAGTTCTATGATATTAGGCAATAAAAAATATGTTTTGTGTTAAGTTCGAAATACATTTTT
ACAGCTTTAATTTGCAAGGTGGAGACTAAAGAGTCAAGATAGAATAGCCTGAGCATCGTT
TACAAAAACAAGCTTCTTAATAAACTGGATTTATTTGGAACAACCTTGAAATGAATGACA
ATCATACTTGCATCAGAAAAACATCAATGGACCAAAAAGATTCCCTGCCCAATATTGTCA
ATACAGTAAGAATGACCACTGCATGCACATAAGTTCAATCTTACTTTGCACATATACACA
CAATTCATGCTTCTGAGGTCTTTTCGAAATGTATCTTTCAAAATTGCACAGCCTTTTTCA
AAAACACAATGTTTTCTACATTTATCAAAGTAGTTGTACAACACCAAGGGTACCACCGTG
TGCCAAACAAACCTCAATATAAATTGAAAATTACAACAAATATGAAATTGGGTTAAAGAA
CACTTTGCAACAAAAAGGAAATCTTATCCTTGTAAGGCATCCTTGACTTCCTGAGGAACT
AGATTGATGATAGTATTGTGTTCTCTGTATGTTGCTATTACACCACCAAGATTTGGCCAT
TTTACATCAGCATCATACTGAATTTTCTTTCCTGAAAATATAGGGGAAAACAGGATAAGG
AAACAATTACGAGGGGAAATGATCATTCAGGGCTTTTTTGTTGTATGTTTGGGATCAACC
AATATCCAATGTTTTGGATGAAAATGATAATGTTGAAACTAACTTGTCTTGTAGTTTTAA
ACGGACGTCATTAACTAAACACCATTATAATTTTTTTTGAAGTTTGTCTAATTGAAACAC
TTTGCCAAATTCAATCTTTCTTTTTACTACCGTTTTTAATTATCGAAATACTTTGTATGA
CAATTTTTCTACTATGAAATGGTCTTGAATCAATTTTCATTCACCATAACTAAAAGTGGG
TGAGTGTTTTGATTTGACTTATGACTCTATACCAAAGTCTTGTTAGAACACCAGCATATA
GGAAAACAAAATGCCAAATTTGAATTTAACTAATGCTTTATGAGATAAGAAATAGGAAGG
GGTGTTACCGTGGACATCAGTAAGCTGTCCGCCAATCGCACACAGTATTGCTTCTGGTGC
ACAAGTGTCCCATTTTTTGCATCCAGGTGAAGCAAAGACATATGCATCAGCCTCACCTTC
AATTACCCTGATGACCT

InterProScan

PANTHER	ORC1 (IPR020793) - T[2-124] 1.7E-36
SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[29-124] 8.43E-9
CDD	Cdc6_C (IPR015163) - T[34-117] 3.27539E-15
SMART	Cdc6_C (IPR015163) - T[41-121] 6.8E-9
Pfam	Cdc6_C (IPR015163) - T[41-120] 1.1E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ORC1_HUMAN	50.877 %	115	6.07E-31