- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R5.7...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S242.g05996.02.t
Possible name(s)
SFRP1; SFRP2; SFRP5
Gene model
Location
S242 [28,573 / 41,742]
Amino acid sequence
Length: 335
>Phmamm.CG.MTP2014.S242.g05996.02.p
MTPETSWTAHKAGVLVSGLILTLAIIQSGHRTFATAIGQYVRQPSHCVPIPANMKLCRDV
GYREMMLPNFFSHESLDEAHRQSVSFVPLLATRCHPHTKIFLCSLFSPVCLSGGPIPPCR
SLCLSVQSACRQIMSDFSFEWPEMLNCSKFTDTHPCVTITNATTTSSPLPTTESGLGDPR
NESEASGICAPCTTPLDNTVVDNFCASEFMFKAYFNKLKISGKGSKRQIRFKKKKRTVYK
QGPLKDRDLKRKYLKLSIPSSRRCDCPQVDDLVSKKGDKKGKKRKGKKKKVAFLVMGRKV
NRKLLVTVIHKWDKKNKLLKKMEKKFNQKTCTLGE
Nucleotide sequence
Length: 1,691
>Phmamm.CG.MTP2014.S242.g05996.02.t
CCATGTTGAGTTCATGGTGACAGAGTTTTCCATATTTGGAATAGTTTGTGTACATGCTAA
ACGACTTGTTTTTTGCCCACAGAGGAGTTGATTTAATTTTTTTTACAATCCGTCGACTGA
GACGAAGATTAGCCTTACGGGAGGACATTGACGCTTTGGAGAGCTTTCGGCGGAAAAATG
ACGCCCGAAACCTCGTGGACCGCCCACAAAGCTGGCGTGCTAGTAAGCGGACTGATTTTA
ACGCTCGCCATTATACAATCTGGCCATCGGACATTTGCAACAGCAATAGGACAGTATGTG
CGGCAGCCGTCACATTGCGTACCAATTCCAGCAAACATGAAATTATGTCGAGACGTCGGC
TACAGGGAAATGATGCTGCCTAACTTTTTTAGCCACGAATCGTTGGACGAGGCGCATCGC
CAGTCTGTAAGCTTTGTGCCCTTGCTTGCAACCCGATGTCATCCACATACCAAAATCTTT
CTATGTTCTCTGTTTTCGCCGGTTTGTCTGAGCGGAGGTCCAATACCTCCCTGCCGTTCG
CTATGTCTTAGCGTACAGTCGGCTTGTAGGCAAATCATGAGCGATTTCTCCTTTGAATGG
CCAGAGATGCTCAACTGCTCCAAGTTCACTGATACCCATCCGTGCGTCACTATCACCAAC
GCAACGACAACCTCCTCGCCTTTGCCAACAACAGAAAGTGGCCTGGGCGACCCACGCAAC
GAGTCAGAAGCAAGCGGAATTTGCGCACCGTGTACGACTCCATTGGACAACACAGTCGTG
GACAACTTCTGTGCAAGCGAATTCATGTTCAAGGCCTACTTCAACAAGCTAAAGATTTCG
GGCAAAGGTTCCAAACGTCAAATCAGATTCAAGAAAAAGAAGCGAACGGTTTACAAGCAA
GGGCCATTAAAGGATCGAGATCTGAAACGCAAGTATCTCAAGCTCAGCATTCCAAGTAGC
AGAAGGTGCGACTGTCCGCAAGTTGACGATCTCGTTTCGAAGAAAGGAGACAAAAAAGGA
AAAAAGAGAAAAGGAAAAAAGAAGAAGGTTGCTTTCCTTGTGATGGGACGCAAAGTGAAT
AGGAAGCTGCTAGTGACCGTCATCCACAAGTGGGACAAAAAGAACAAGTTGCTCAAGAAG
ATGGAGAAAAAGTTTAATCAGAAGACTTGTACGTTAGGAGAGTGATAAGGGATAAATTGA
CTATGGAAGGGGATGGACTTCGTAAAAGCTGCCAGCTTTCTGCCGGAACTGGCCGCTTCT
TTAAACTCGTGTTGATAACGCTGTGCTGGCCATATGTTTTTTTTGTGGAAATTTTTTTCA
GTTCTTTATTGTTTCATTTCTAATTGACTTTAGTTTTTCAATGCCACAGAATCACACGGA
GCAAATCGGGAGACAAAAAATGCGTCGTTTAGTTTTGTTGCTTGTTTGTGGCTTACAAAG
CTGTCACATATCGAAAGCTAAAGTATTAAAACGTTTTGGATGTCCACCTCGCTTTACAAA
AGCGTGTACTTCGCCATTTTTCTGCACAGTACGCAAATCCATGAATAACTGCCCATCTAG
CAAAAACAAAGTCGTTTTCGTTTAAAGTAATAAGTTGTTAGCTTTATATGTGAAAGAAAA
CTATTGTAATTTAAGCACAGTCTTACGTTTTCTTTTTTGCTTTTTTATTGTTTTGTGCAG
CCTAGCTATCC
| Gene3D |
Frizzled_dom_sf (IPR036790) - T[36-158] 1.4E-34 |
| PANTHER |
Frizzled/SFRP (IPR015526) - T[38-331] 2.6E-65 |
| PANTHER |
SFRP-5 (IPR034860) - T[38-331] 2.6E-65 |
| ProSiteProfiles |
Frizzled_dom (IPR020067) - T[42-159] 23.32 |
| SUPERFAMILY |
Frizzled_dom_sf (IPR036790) - T[46-155] 4.05E-34 |
| SMART |
Frizzled_dom (IPR020067) - T[46-161] 3.7E-42 |
| Pfam |
Frizzled_dom (IPR020067) - T[47-153] 4.0E-26 |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[186-328] 1.57E-7 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[189-331] 14.663 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SFRP2_HUMAN | 31.464 % | 170 | 9.08E-51 |
| SFRP5_HUMAN | 37.919 % | 181 | 1.41E-54 |
| SFRP1_HUMAN | 39.057 % | 184 | 6.18E-56 |