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  1. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S23.g00937.02.t

Possible name(s)

CLEC16A

Location

S23 [80,641 / 90,739]

Sequences

Amino acid sequence

Length: 927

>Phmamm.CG.MTP2014.S23.g00937.02.p
MQRRGWLGGPKPPKNPHSLEHLRYLHHVLTKNHTITENNKSLIVEALRSMSEILIWGDQN
DSSVFEFYLEKNMFLFFLNILQQNSGNYVCVQLLQTLNILFENLQHETSLYYLLSNNHVN
DVICHKFDFSDEEVMAYYISFLKTLSLRLNEHTIHFFYNEHTDDFALYTEGIKFFNHSET
MVRIAVRTLTLNVYKVNDHAMLRFIQDKTAAPYFSNLVWFIAEHVRQVDACVRANVNHQQ
SDRLRDIVAEHLDHLHYLNDIVTLENNMLNKVLIDHLLHRLFFPLYVRSLADGAPGDDNP
IEHKELLQQPESLEKLLSSRKLRKKTKNKKRPNFRNLGSDEETEIKSSPEPDAEALPVGV
SSEFFQRQLSIAASQTASSGSSLEASLGSISPESHLDRPFLDTIYSALNCTENDYTAIFA
LCLLYAMLQNKGISCELKRIVQLGMGEEEKRNESYCHWLIERLLRIISKAVKPDSKIRLA
TLRLTVILLKKLGMKNGECVLPEHHLTCVEEEEMFLDIFEDEYRTFMNKPFNVEYLMMDS
SLLLPPTVTPLTGIEFTKRLPCGPTEQIRRSIGVFLALRDVSLTFCKEVETQLPLTREQD
CIQTDDKLDLNNSDLIACTVVGKDSKNRRFLVVDLYQLILVEPDNKRLGWGVVKFSGFLQ
DVEVSSDPDDSRTLHVTIHKPSGTRRVPMLAANFVFDDHIRCMAAKQRLTKGRMRARHLK
TRRIAVLLGVSPDAHDDPFSSSYLLNSGYQAPRSQFRAFAEPQVLRTDAQRPGVALNQRD
LSRTPTARVHPLLKRPGHAASRVSPVKSGGRIGNLGLPLLSSPSRASSSCSSSSDEKPTS
SDGDVIEVSAEVPDESPESTPKPEIVVESNPEVTSVEVVTSSEDSRSGDNEEVNAKMVPD
DVAVEVTQNETETETSRSASINEIARE

Nucleotide sequence

Length: 2,784

>Phmamm.CG.MTP2014.S23.g00937.02.t
ATGCAGCGACGGGGATGGCTTGGTGGACCAAAACCACCAAAAAATCCACATTCTTTGGAA
CATCTAAGGTACCTTCACCATGTTCTGACTAAAAATCACACCATCACAGAAAACAATAAA
TCATTGATTGTTGAAGCATTAAGGTCTATGTCAGAAATTCTGATTTGGGGAGATCAAAAT
GACAGTTCTGTCTTTGAGTTTTATCTGGAAAAGAACATGTTTCTTTTTTTCCTCAACATT
TTGCAACAAAACTCTGGAAATTATGTTTGTGTACAACTTCTTCAAACCTTAAACATTCTT
TTTGAGAATCTTCAACATGAAACCTCTTTGTATTATCTACTTTCCAATAATCATGTAAAT
GATGTTATTTGTCATAAGTTTGACTTCTCTGATGAAGAAGTAATGGCATATTACATTTCA
TTTCTCAAAACCTTATCACTAAGGTTGAATGAACACACCATCCATTTTTTCTACAATGAG
CACACTGATGATTTTGCTCTCTACACCGAAGGAATAAAGTTTTTCAATCATTCTGAAACT
ATGGTGCGGATTGCTGTGCGAACTCTTACTTTAAATGTGTACAAAGTCAATGACCATGCA
ATGTTGAGGTTCATTCAAGACAAAACTGCTGCTCCTTATTTCTCCAATCTTGTGTGGTTT
ATTGCTGAACATGTCAGACAGGTTGATGCCTGTGTGAGGGCAAATGTGAATCACCAACAA
AGTGACAGACTTCGAGACATTGTTGCTGAACATTTGGACCACCTACATTACCTCAATGAT
ATTGTGACATTGGAAAACAACATGTTAAATAAAGTTTTAATAGATCACTTGCTTCATCGA
TTGTTTTTTCCTTTGTATGTCAGATCACTGGCAGATGGTGCTCCAGGAGACGACAATCCA
ATTGAACACAAGGAGCTTCTTCAGCAACCAGAAAGTCTTGAGAAATTGTTGTCATCAAGG
AAGCTGAGAAAGAAAACAAAAAACAAGAAAAGACCCAACTTTAGAAATCTTGGTTCTGAT
GAAGAAACTGAAATCAAAAGTAGCCCTGAACCGGACGCAGAAGCCTTACCTGTTGGTGTA
TCAAGTGAATTCTTTCAAAGGCAATTAAGCATTGCTGCATCCCAAACAGCTTCATCAGGG
AGTTCTCTTGAGGCAAGTCTAGGCTCAATTTCACCTGAATCTCATCTTGACAGGCCGTTC
TTGGACACCATCTACAGTGCTCTAAACTGCACAGAAAATGATTACACTGCAATTTTTGCT
CTTTGTTTGCTATATGCAATGCTTCAAAACAAAGGTATTAGCTGTGAATTAAAGCGAATT
GTTCAACTTGGGATGGGTGAAGAGGAGAAACGGAATGAGTCGTATTGCCATTGGTTGATT
GAGAGGTTGCTGAGAATCATTAGCAAAGCTGTCAAACCAGACAGCAAAATTCGCTTAGCT
ACCCTTCGTTTGACCGTGATCTTGTTGAAAAAATTGGGGATGAAGAATGGAGAGTGTGTG
CTACCTGAACATCATCTAACATGTGTTGAGGAGGAGGAAATGTTTTTAGACATTTTTGAA
GACGAATACAGAACATTTATGAACAAACCATTCAATGTGGAATATCTTATGATGGATTCA
TCATTGCTGCTACCACCAACAGTAACTCCTCTAACTGGTATTGAGTTTACAAAACGACTG
CCATGTGGCCCAACTGAACAAATAAGAAGGTCAATTGGTGTGTTTCTTGCTCTGCGTGAT
GTCTCTCTAACATTTTGCAAAGAGGTTGAAACTCAACTTCCGCTGACCAGAGAACAGGAT
TGCATTCAGACTGATGACAAACTTGACCTTAACAACAGCGACCTCATTGCCTGCACAGTT
GTTGGCAAAGACAGCAAGAATCGTCGATTTTTGGTTGTTGATTTGTACCAACTAATTTTG
GTGGAGCCTGACAACAAACGCTTGGGTTGGGGAGTCGTGAAATTTTCAGGATTCTTGCAG
GATGTTGAAGTTAGTAGCGACCCGGATGACAGCAGAACGCTTCATGTGACAATACATAAA
CCTTCAGGCACCAGAAGGGTTCCAATGCTTGCTGCGAATTTTGTATTTGATGATCACATA
CGATGTATGGCAGCCAAACAACGTTTGACCAAAGGTCGTATGAGAGCTCGTCATTTGAAG
ACTCGTCGCATTGCTGTGTTGTTGGGTGTATCACCTGATGCACATGACGACCCATTTTCA
TCCAGCTATCTACTCAACTCCGGTTACCAAGCACCACGAAGCCAATTCCGGGCTTTTGCC
GAACCGCAAGTGTTACGAACGGACGCTCAACGACCAGGGGTGGCGCTCAACCAACGAGAT
CTATCCCGTACACCAACTGCCCGTGTGCATCCTCTGCTGAAACGACCCGGACATGCAGCC
AGTCGTGTATCGCCTGTGAAGTCAGGAGGCCGAATTGGGAATCTGGGACTCCCCCTTCTG
TCGTCACCGTCACGTGCTTCGTCGAGCTGTTCTAGCTCCAGTGACGAAAAACCGACGTCA
TCAGATGGAGACGTCATCGAAGTTTCAGCTGAAGTCCCAGATGAGTCACCGGAGTCGACG
CCCAAACCTGAAATTGTCGTCGAATCGAACCCAGAAGTGACGTCAGTGGAAGTGGTGACT
TCATCAGAGGATTCGCGTTCAGGTGACAACGAGGAGGTAAATGCAAAGATGGTGCCAGAT
GACGTTGCTGTCGAAGTAACACAAAATGAAACAGAAACCGAAACGTCAAGGAGTGCATCA
ATAAATGAAATTGCCAGAGAATAA

InterProScan

Pfam
CLEC16A/TT9_N (IPR019155) - T[47-194] 1.9E-58

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CL16A_HUMAN 52.485 % 830 0