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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2393.g16618.01.t

Possible name(s)

ZMAT1; ZMAT3; ZMAT4

Location

S2393 [5,499 / 12,627]

Sequences

Amino acid sequence

Length: 275

>Phmamm.CG.MTP2014.S2393.g16618.01.p
MKNHLACQPWYACQGLPTPAPMNACLVVESSTGNPDDPDNLFLSDLCKVCQAELNTPEQA
EAHYMSDRHQKKVRTYFLVKVGVKEMPSKPDTPPDQPQWPENTDNLSREEYCKWCKIMFS
SRNVAECHYNGKKHIKKMKEQYSEDSKDKTIWKHCLVCDIRVNSDAQLEIHLDSMKHKNM
EEKRRIMMFSSKFPENQGSENSLSSVGDPVDCNNQNSTQNPLKVEGHTVIGGFMVPTSPD
DNVTNTPVDFREQEAIVKYINHITSLIMIMLRRHL

Nucleotide sequence

Length: 828

>Phmamm.CG.MTP2014.S2393.g16618.01.t
ATGAAAAACCATCTAGCGTGCCAACCTTGGTATGCATGCCAGGGGTTGCCGACCCCTGCT
CCAATGAATGCATGTTTGGTTGTTGAATCATCAACGGGAAATCCAGATGACCCAGATAAT
TTGTTTCTATCTGACTTGTGCAAAGTTTGTCAGGCCGAGCTGAACACACCAGAGCAAGCT
GAAGCTCATTACATGAGCGACAGACATCAAAAGAAAGTTCGGACTTATTTCCTTGTGAAA
GTTGGAGTGAAAGAAATGCCTTCGAAACCTGACACCCCACCAGATCAGCCACAGTGGCCA
GAAAACACAGACAACTTGTCGCGTGAGGAATATTGCAAGTGGTGCAAAATAATGTTTTCA
TCACGAAATGTTGCCGAGTGTCATTATAATGGAAAGAAACATATCAAGAAAATGAAGGAA
CAATATTCAGAAGACAGCAAAGATAAAACAATTTGGAAACACTGTCTGGTGTGCGACATA
CGAGTCAACTCTGATGCGCAACTTGAAATTCATCTGGATAGCATGAAACACAAAAACATG
GAGGAAAAACGACGCATCATGATGTTCAGTTCAAAGTTTCCAGAAAATCAAGGATCAGAA
AACAGTTTGTCATCTGTTGGTGACCCAGTTGACTGCAACAACCAAAACTCAACTCAAAAC
CCCTTAAAAGTTGAAGGACACACAGTCATTGGTGGATTTATGGTCCCTACGTCACCTGAT
GATAACGTCACCAACACACCAGTTGACTTCAGAGAGCAAGAAGCTATCGTGAAATACATC
AATCACATCACTAGTTTGATTATGATTATGTTGAGGCGCCATCTTTAA

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[21-77] 2.5E-10 - T[86-142] 2.38E-10 - T[152-188] 5.03E-8
SMART
Matrin/U1-like-C_Znf_C2H2 (IPR003604) - T[42-76] 0.017 - T[107-141] 0.0048 - T[150-184] 0.42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value