- Clone 'AHC0AAA42YK07' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S238.g05918.03.t
Possible name(s)
TFF1
Gene model
Location
S238 [39,746 / 45,850]
Amino acid sequence
Length: 730
>Phmamm.CG.MTP2014.S238.g05918.03.p
MKAVFFLLPLLAVTFSAPATDTSGYEVNNEPLLIFALISAQRHGADPTLLLDSIMPTLLK
DGMNFSKEKQISLLNAGGMTNDQAISVLRDLLPILMQKGKSVEEQAMALLLASKQFCHKN
KDEDSTCPEEEETVLPLVTMQTTRGCDYQHIEIEGDNVIPTNETCLCDDQTDLMFWISLF
GQFSEKAKTDTPDQFPLMLLLFLDDAKCSGTLTHGGRSCTCAQVNMGHEATLMQYLITSP
EVRNLLTDEQQKIITDALGTPAHRASLTMQDYLYSVMAGFTSPEMLSLLQNQGQGKDSML
KQLILSSIGIDSSMVHIILNGGFNDDADKISVIKYLTNMGALDASMIPFLLGVQNGKDFL
LASMVNAGQMDPLTTVMLGMAEGGLTTEEFLNLMLFQGFQAKRPDLFDSIGKPYVPALPR
GVYPGSRLYFAHFETLGVNTCSLHDLRNRYDCGYIGISAAECESVPYCCYNPVFLTDVEV
RNATEGQITTAAVIPWCYYNIFFVYYDSYYMQVKSPGEFAAPIECLGLFKYGLKLDRNLY
HLYDPQNPNTGISRLMRPRYECGFPGISEFQCVAIRGCCWDGDAPYKIPQCFKRNGAISL
PFTFDKIPAAFMPKNGTCNTNKYNIPLLYEKREACHYRFEFYIAGYDLLAVPNDVDCTTK
LGCCWEYNEEVIRKYPNSPRCYKRVGGYHHQVPSGLPSASALLRSGDSDMAGSQVIEYAT
NTGMPPVMKP
Nucleotide sequence
Length: 2,193
>Phmamm.CG.MTP2014.S238.g05918.03.t
ATGAAGGCCGTTTTCTTTCTTTTGCCGTTACTGGCTGTTACGTTTTCAGCACCAGCAACC
GACACATCAGGTTACGAGGTCAACAACGAACCGCTTCTTATATTTGCTCTAATTTCTGCA
CAAAGGCATGGCGCTGATCCTACACTACTTCTTGATTCCATCATGCCAACACTTTTAAAA
GATGGAATGAATTTCTCAAAGGAAAAGCAAATTTCGTTGTTGAATGCTGGTGGAATGACT
AACGATCAAGCAATATCTGTGCTTCGTGATTTGCTTCCAATTCTGATGCAAAAGGGAAAA
TCTGTTGAAGAACAAGCCATGGCACTTCTCCTTGCTTCAAAACAGTTCTGCCACAAAAAT
AAAGACGAAGATTCAACTTGTCCCGAAGAAGAGGAAACTGTGCTACCGTTAGTCACCATG
CAGACTACACGAGGTTGCGATTATCAACATATTGAAATTGAAGGCGATAACGTCATCCCC
ACCAACGAAACTTGCCTTTGTGACGATCAAACCGACCTGATGTTTTGGATTTCTCTGTTC
GGACAGTTTTCTGAAAAAGCAAAAACTGATACCCCTGACCAGTTTCCGCTTATGCTTTTG
TTGTTTCTTGATGACGCTAAATGCAGTGGCACATTAACTCATGGTGGCCGATCCTGTACA
TGTGCTCAAGTCAATATGGGCCACGAAGCAACCTTGATGCAGTATCTTATCACTTCACCC
GAAGTTCGCAACCTTCTCACAGATGAGCAACAAAAAATCATCACTGATGCTTTGGGAACT
CCAGCTCACAGAGCTTCACTTACTATGCAAGATTATCTTTACTCTGTAATGGCTGGTTTC
ACATCACCTGAAATGCTTTCATTGCTTCAAAATCAGGGCCAAGGCAAAGATTCTATGTTA
AAGCAGCTCATCCTTTCCAGTATCGGAATCGACTCTTCCATGGTGCACATTATTCTAAAC
GGTGGATTCAATGATGATGCTGACAAAATATCCGTAATCAAATACCTCACCAATATGGGA
GCCCTTGATGCATCCATGATCCCGTTCTTGCTGGGCGTGCAAAACGGAAAAGACTTTCTT
CTTGCTAGCATGGTTAACGCTGGTCAAATGGATCCATTAACGACTGTTATGCTGGGAATG
GCGGAAGGAGGCCTTACCACCGAGGAGTTCCTAAATCTGATGCTTTTTCAAGGTTTTCAG
GCGAAAAGGCCCGATCTGTTCGACAGCATTGGAAAACCCTACGTCCCTGCTCTGCCCCGA
GGAGTTTACCCAGGAAGTCGCCTTTACTTTGCTCATTTCGAAACTCTTGGTGTCAATACT
TGTTCACTTCATGACTTGCGTAACAGATATGATTGTGGTTACATTGGAATCAGTGCCGCC
GAATGCGAAAGTGTCCCATACTGCTGTTATAACCCTGTTTTCTTGACCGATGTTGAAGTA
CGAAATGCCACAGAGGGTCAAATTACAACAGCAGCAGTTATCCCTTGGTGTTACTACAAT
ATATTTTTCGTGTACTACGACTCGTATTACATGCAGGTAAAGTCACCGGGTGAATTTGCT
GCACCAATCGAATGCCTTGGACTGTTTAAATACGGACTCAAACTTGATCGTAATCTTTAT
CACTTGTACGATCCTCAAAATCCCAATACCGGAATCTCAAGACTTATGCGACCCCGATAC
GAATGCGGTTTCCCCGGGATCTCTGAGTTTCAATGTGTTGCCATTCGCGGTTGTTGCTGG
GACGGGGATGCACCTTACAAAATTCCTCAGTGTTTCAAGCGAAACGGGGCTATTTCTCTT
CCCTTCACATTTGACAAAATCCCTGCTGCATTTATGCCTAAAAATGGAACTTGCAACACT
AACAAATACAACATTCCTCTGCTTTACGAAAAGCGAGAAGCTTGCCATTATCGGTTTGAG
TTCTACATTGCCGGATACGATTTGTTGGCTGTCCCCAACGATGTAGACTGCACCACAAAG
CTAGGATGTTGTTGGGAGTACAACGAAGAGGTGATAAGAAAATATCCCAACAGTCCAAGA
TGTTACAAACGTGTTGGTGGTTATCATCATCAAGTTCCTTCTGGATTGCCAAGTGCCAGT
GCACTTCTTCGTAGCGGAGATTCTGATATGGCAGGCAGCCAAGTCATCGAATACGCAACT
AACACGGGAATGCCTCCTGTAATGAAACCATAG
| CDD |
P_trefoil_dom (IPR000519) - T[439-500] 1.09849E-7 - T[558-595] 8.03149E-10 |
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[439-501] 10.33 - T[550-595] 9.623 |
| SMART |
P_trefoil_dom (IPR000519) - T[439-504] 5.0E-10 - T[549-598] 2.6E-8 |
| Pfam |
P_trefoil_dom (IPR000519) - T[441-500] 1.2E-12 - T[559-593] 1.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|
