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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R30....' > 
  2. Transcript 'Phfumi.CG.MTP2014.S5...' > 
  3. Transcript 'Cisavi.CG.ENS81.R30....' > 
  4. Clone 'cicl005b13' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S238.g05918.03.t

Possible name(s)

TFF1

Gene model

Phmamm.CG.MTP2014.S238.g05918

Location

S238 [39,746 / 45,850]

Sequences

Amino acid sequence

Length: 730

>Phmamm.CG.MTP2014.S238.g05918.03.p
MKAVFFLLPLLAVTFSAPATDTSGYEVNNEPLLIFALISAQRHGADPTLLLDSIMPTLLK
DGMNFSKEKQISLLNAGGMTNDQAISVLRDLLPILMQKGKSVEEQAMALLLASKQFCHKN
KDEDSTCPEEEETVLPLVTMQTTRGCDYQHIEIEGDNVIPTNETCLCDDQTDLMFWISLF
GQFSEKAKTDTPDQFPLMLLLFLDDAKCSGTLTHGGRSCTCAQVNMGHEATLMQYLITSP
EVRNLLTDEQQKIITDALGTPAHRASLTMQDYLYSVMAGFTSPEMLSLLQNQGQGKDSML
KQLILSSIGIDSSMVHIILNGGFNDDADKISVIKYLTNMGALDASMIPFLLGVQNGKDFL
LASMVNAGQMDPLTTVMLGMAEGGLTTEEFLNLMLFQGFQAKRPDLFDSIGKPYVPALPR
GVYPGSRLYFAHFETLGVNTCSLHDLRNRYDCGYIGISAAECESVPYCCYNPVFLTDVEV
RNATEGQITTAAVIPWCYYNIFFVYYDSYYMQVKSPGEFAAPIECLGLFKYGLKLDRNLY
HLYDPQNPNTGISRLMRPRYECGFPGISEFQCVAIRGCCWDGDAPYKIPQCFKRNGAISL
PFTFDKIPAAFMPKNGTCNTNKYNIPLLYEKREACHYRFEFYIAGYDLLAVPNDVDCTTK
LGCCWEYNEEVIRKYPNSPRCYKRVGGYHHQVPSGLPSASALLRSGDSDMAGSQVIEYAT
NTGMPPVMKP

Nucleotide sequence

Length: 2,193

>Phmamm.CG.MTP2014.S238.g05918.03.t
ATGAAGGCCGTTTTCTTTCTTTTGCCGTTACTGGCTGTTACGTTTTCAGCACCAGCAACC
GACACATCAGGTTACGAGGTCAACAACGAACCGCTTCTTATATTTGCTCTAATTTCTGCA
CAAAGGCATGGCGCTGATCCTACACTACTTCTTGATTCCATCATGCCAACACTTTTAAAA
GATGGAATGAATTTCTCAAAGGAAAAGCAAATTTCGTTGTTGAATGCTGGTGGAATGACT
AACGATCAAGCAATATCTGTGCTTCGTGATTTGCTTCCAATTCTGATGCAAAAGGGAAAA
TCTGTTGAAGAACAAGCCATGGCACTTCTCCTTGCTTCAAAACAGTTCTGCCACAAAAAT
AAAGACGAAGATTCAACTTGTCCCGAAGAAGAGGAAACTGTGCTACCGTTAGTCACCATG
CAGACTACACGAGGTTGCGATTATCAACATATTGAAATTGAAGGCGATAACGTCATCCCC
ACCAACGAAACTTGCCTTTGTGACGATCAAACCGACCTGATGTTTTGGATTTCTCTGTTC
GGACAGTTTTCTGAAAAAGCAAAAACTGATACCCCTGACCAGTTTCCGCTTATGCTTTTG
TTGTTTCTTGATGACGCTAAATGCAGTGGCACATTAACTCATGGTGGCCGATCCTGTACA
TGTGCTCAAGTCAATATGGGCCACGAAGCAACCTTGATGCAGTATCTTATCACTTCACCC
GAAGTTCGCAACCTTCTCACAGATGAGCAACAAAAAATCATCACTGATGCTTTGGGAACT
CCAGCTCACAGAGCTTCACTTACTATGCAAGATTATCTTTACTCTGTAATGGCTGGTTTC
ACATCACCTGAAATGCTTTCATTGCTTCAAAATCAGGGCCAAGGCAAAGATTCTATGTTA
AAGCAGCTCATCCTTTCCAGTATCGGAATCGACTCTTCCATGGTGCACATTATTCTAAAC
GGTGGATTCAATGATGATGCTGACAAAATATCCGTAATCAAATACCTCACCAATATGGGA
GCCCTTGATGCATCCATGATCCCGTTCTTGCTGGGCGTGCAAAACGGAAAAGACTTTCTT
CTTGCTAGCATGGTTAACGCTGGTCAAATGGATCCATTAACGACTGTTATGCTGGGAATG
GCGGAAGGAGGCCTTACCACCGAGGAGTTCCTAAATCTGATGCTTTTTCAAGGTTTTCAG
GCGAAAAGGCCCGATCTGTTCGACAGCATTGGAAAACCCTACGTCCCTGCTCTGCCCCGA
GGAGTTTACCCAGGAAGTCGCCTTTACTTTGCTCATTTCGAAACTCTTGGTGTCAATACT
TGTTCACTTCATGACTTGCGTAACAGATATGATTGTGGTTACATTGGAATCAGTGCCGCC
GAATGCGAAAGTGTCCCATACTGCTGTTATAACCCTGTTTTCTTGACCGATGTTGAAGTA
CGAAATGCCACAGAGGGTCAAATTACAACAGCAGCAGTTATCCCTTGGTGTTACTACAAT
ATATTTTTCGTGTACTACGACTCGTATTACATGCAGGTAAAGTCACCGGGTGAATTTGCT
GCACCAATCGAATGCCTTGGACTGTTTAAATACGGACTCAAACTTGATCGTAATCTTTAT
CACTTGTACGATCCTCAAAATCCCAATACCGGAATCTCAAGACTTATGCGACCCCGATAC
GAATGCGGTTTCCCCGGGATCTCTGAGTTTCAATGTGTTGCCATTCGCGGTTGTTGCTGG
GACGGGGATGCACCTTACAAAATTCCTCAGTGTTTCAAGCGAAACGGGGCTATTTCTCTT
CCCTTCACATTTGACAAAATCCCTGCTGCATTTATGCCTAAAAATGGAACTTGCAACACT
AACAAATACAACATTCCTCTGCTTTACGAAAAGCGAGAAGCTTGCCATTATCGGTTTGAG
TTCTACATTGCCGGATACGATTTGTTGGCTGTCCCCAACGATGTAGACTGCACCACAAAG
CTAGGATGTTGTTGGGAGTACAACGAAGAGGTGATAAGAAAATATCCCAACAGTCCAAGA
TGTTACAAACGTGTTGGTGGTTATCATCATCAAGTTCCTTCTGGATTGCCAAGTGCCAGT
GCACTTCTTCGTAGCGGAGATTCTGATATGGCAGGCAGCCAAGTCATCGAATACGCAACT
AACACGGGAATGCCTCCTGTAATGAAACCATAG

InterProScan

CDD
P_trefoil_dom (IPR000519) - T[439-500] 1.09849E-7 - T[558-595] 8.03149E-10
ProSiteProfiles
P_trefoil_dom (IPR000519) - T[439-501] 10.33 - T[550-595] 9.623
SMART
P_trefoil_dom (IPR000519) - T[439-504] 5.0E-10 - T[549-598] 2.6E-8
Pfam
P_trefoil_dom (IPR000519) - T[441-500] 1.2E-12 - T[559-593] 1.5E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value