- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R30....' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S238.g05918.01.t
Possible name(s)
TFF1
Gene model
Location
S238 [39,425 / 46,169]
Amino acid sequence
Length: 676
>Phmamm.CG.MTP2014.S238.g05918.01.p
MPTLLKDGMNFSKEKQISLLNAGGMTNDQAISVLRDLLPILMQKGKSVEEQAMALLLASK
QFCHKNKDEDSTCPEEEETVLPLVTMQTTRGCDYQHIEIEGDNVIPTNETCLCDDQTDLM
FWISLFGQFSEKAKTDTPDQFPLMLLLFLDDAKCSGTLTHGGRSCTCAQVNMGHEATLMQ
YLITSPEVRNLLTDEQQKIITDALGTPAHRASLTMQDYLYSVMAGFTSPEMLSLLQNQGQ
GKDSMLKQLILSSIGIDSSMVHIILNGGFNDDADKISVIKYLTNMGALDASMIPFLLGVQ
NGKDFLLASMVNAGQMDPLTTVMLGMAEGGLTTEEFLNLMLFQGFQAKRPDLFDSIGKPY
VPALPRGVYPGSRLYFAHFETLGVNTCSLHDLRNRYDCGYIGISAAECESVPYCCYNPVF
LTDVEVRNATEGQITTAAVIPWCYYNIFFVYYDSYYMQVKSPGEFAAPIECLGLFKYGLK
LDRNLYHLYDPQNPNTGISRLMRPRYECGFPGISEFQCVAIRGCCWDGDAPYKIPQCFKR
NGAISLPFTFDKIPAAFMPKNGTCNTNKYNIPLLYEKREACHYRFEFYIAGYDLLAVPND
VDCTTKLGCCWEYNEEVIRKYPNSPRCYKRVGGYHHQVPSGLPSASALLRSGDSDMAGSQ
VIEYATNTGMPPVMKP
Nucleotide sequence
Length: 2,702
>Phmamm.CG.MTP2014.S238.g05918.01.t
GATCAGGGATTTTTCTGGCGGCGCGAGAGGGGATTTCGTCATAAGTCGCAATTCCTCTTC
AACTGGAAACAACAACGAGCGAAAAGAAGCAAGAAAAGGACAAAAGAACAAAATGAAGGC
CGTTTTCTTTCTTTTGCCGTTACTGGCTGTTACGTTTTCAGGTAAGATTGATTTTTCTTG
CGACATTTTCATCACAAAAATGTATAGATTCTAATATTTTGTTTCTTTATTTTTTGCAGC
ACCAGCAACCGACACATCAGGTTACGAGGTCAACAACGAACCGCTTCTTATATTTGCTCT
AATTTCTGCACAAAGGCATGGCGCTGATCCTACACTACTTCTTGATTCCATCATGCCAAC
ACTTTTAAAAGATGGAATGAATTTCTCAAAGGAAAAGCAAATTTCGTTGTTGAATGCTGG
TGGAATGACTAACGATCAAGCAATATCTGTGCTTCGTGATTTGCTTCCAATTCTGATGCA
AAAGGGAAAATCTGTTGAAGAACAAGCCATGGCACTTCTCCTTGCTTCAAAACAGTTCTG
CCACAAAAATAAAGACGAAGATTCAACTTGTCCCGAAGAAGAGGAAACTGTGCTACCGTT
AGTCACCATGCAGACTACACGAGGTTGCGATTATCAACATATTGAAATTGAAGGCGATAA
CGTCATCCCCACCAACGAAACTTGCCTTTGTGACGATCAAACCGACCTGATGTTTTGGAT
TTCTCTGTTCGGACAGTTTTCTGAAAAAGCAAAAACTGATACCCCTGACCAGTTTCCGCT
TATGCTTTTGTTGTTTCTTGATGACGCTAAATGCAGTGGCACATTAACTCATGGTGGCCG
ATCCTGTACATGTGCTCAAGTCAATATGGGCCACGAAGCAACCTTGATGCAGTATCTTAT
CACTTCACCCGAAGTTCGCAACCTTCTCACAGATGAGCAACAAAAAATCATCACTGATGC
TTTGGGAACTCCAGCTCACAGAGCTTCACTTACTATGCAAGATTATCTTTACTCTGTAAT
GGCTGGTTTCACATCACCTGAAATGCTTTCATTGCTTCAAAATCAGGGCCAAGGCAAAGA
TTCTATGTTAAAGCAGCTCATCCTTTCCAGTATCGGAATCGACTCTTCCATGGTGCACAT
TATTCTAAACGGTGGATTCAATGATGATGCTGACAAAATATCCGTAATCAAATACCTCAC
CAATATGGGAGCCCTTGATGCATCCATGATCCCGTTCTTGCTGGGCGTGCAAAACGGAAA
AGACTTTCTTCTTGCTAGCATGGTTAACGCTGGTCAAATGGATCCATTAACGACTGTTAT
GCTGGGAATGGCGGAAGGAGGCCTTACCACCGAGGAGTTCCTAAATCTGATGCTTTTTCA
AGGTTTTCAGGCGAAAAGGCCCGATCTGTTCGACAGCATTGGAAAACCCTACGTCCCTGC
TCTGCCCCGAGGAGTTTACCCAGGAAGTCGCCTTTACTTTGCTCATTTCGAAACTCTTGG
TGTCAATACTTGTTCACTTCATGACTTGCGTAACAGATATGATTGTGGTTACATTGGAAT
CAGTGCCGCCGAATGCGAAAGTGTCCCATACTGCTGTTATAACCCTGTTTTCTTGACCGA
TGTTGAAGTACGAAATGCCACAGAGGGTCAAATTACAACAGCAGCAGTTATCCCTTGGTG
TTACTACAATATATTTTTCGTGTACTACGACTCGTATTACATGCAGGTAAAGTCACCGGG
TGAATTTGCTGCACCAATCGAATGCCTTGGACTGTTTAAATACGGACTCAAACTTGATCG
TAATCTTTATCACTTGTACGATCCTCAAAATCCCAATACCGGAATCTCAAGACTTATGCG
ACCCCGATACGAATGCGGTTTCCCCGGGATCTCTGAGTTTCAATGTGTTGCCATTCGCGG
TTGTTGCTGGGACGGGGATGCACCTTACAAAATTCCTCAGTGTTTCAAGCGAAACGGGGC
TATTTCTCTTCCCTTCACATTTGACAAAATCCCTGCTGCATTTATGCCTAAAAATGGAAC
TTGCAACACTAACAAATACAACATTCCTCTGCTTTACGAAAAGCGAGAAGCTTGCCATTA
TCGGTTTGAGTTCTACATTGCCGGATACGATTTGTTGGCTGTCCCCAACGATGTAGACTG
CACCACAAAGCTAGGATGTTGTTGGGAGTACAACGAAGAGGTGATAAGAAAATATCCCAA
CAGTCCAAGATGTTACAAACGTGTTGGTGGTTATCATCATCAAGTTCCTTCTGGATTGCC
AAGTGCCAGTGCACTTCTTCGTAGCGGAGATTCTGATATGGCAGGCAGCCAAGTCATCGA
ATACGCAACTAACACGGGAATGCCTCCTGTAATGAAACCATAGAGTCATCAATGGCCCTT
TGCGTTATTTTTTCCCTTAAAATTCTTGTAATCCCAGGGACGCCGATGCCTTGTGCTGGA
AGCCCTGATGCTGTGATTTCTATGTTTTGTGTGTTTTTTGCGATATTTAATGCTGCCTAC
AACGTTGCTTTGCAACTCGATTTTCGACCAAATACAATTTGGTACCACAGAAATACTAAG
TGTGTAAAAATTTGCTTTCAATTGCAGCTTGTGTTCCGTATATTGGATCTCCAATTGAAT
TAAGTAGTCTCTGAAAAATTTAATTCAAAAACACTTCTAGCTTGATTTCTGGAATATGCC
AA
| SMART |
P_trefoil_dom (IPR000519) - T[385-450] 5.0E-10 - T[495-544] 2.6E-8 |
| CDD |
P_trefoil_dom (IPR000519) - T[385-446] 2.20756E-7 - T[504-541] 1.44729E-9 |
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[385-447] 10.33 - T[496-541] 9.623 |
| Pfam |
P_trefoil_dom (IPR000519) - T[387-446] 1.1E-12 - T[505-539] 1.3E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|