- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S238.g05916.01.t
Possible name(s)
TMTC2
Gene model
Location
S238 [27,350 / 30,821]
Amino acid sequence
Length: 1,156
>Phmamm.CG.MTP2014.S238.g05916.01.p
MSAVLSRLDLTWAVFGEVKHIVLDTEQYVLRACEVLLCKQLRTLCYANGREKDKEQSAEI
LRQLAVVYRLKSPNKLSLIQSCALFNAAAAREADNLEEIAKNLRELCTHVLMLARARNAD
LVTKTDVFYDMVERMRSDVEKELENLTEISDNVSKDERKNMEAMRVEQIRKIQTFVTEEY
LNVMKEIMTCCIDIKGPPPCMYALVGMGSLARNEITPYSDFENVILLEEGVQHRPDYEEI
LEYFRWVAVIFQLILVNFGETIVRFLNIEGLNDPYKKDDDWFYDQYTTCGISPDGFAPHA
SKNPLGRPKTKQKPWETELIKPISGMLKYLETEEDLKNGYHLADILLKTCFVQGNDTVYH
EFRKGVKHFQSRTQDLSLFRKQHEEDLDNFELMTRLSSINFRQRFDMKRTIFRIVTIFIA
SLGRYHQLNSTSSLDIIQELEENSIIDKEFGSSLKYAVAVACEIRLKVYMENRAQADQLF
WNSSENDIKNLGVVEAVGIGSLVSLFHTAENLQYFFDDTVLKSMAPDQDEARRKSSINPN
RVGNIKPTVCMTFGLYEKTIEECHKHLMTHPPSKQRQWFEVLMVHSLYRLKRYEDANEKC
KSLLSETDDLRQLLLCISGESLLNLGRYKEGLAQLEIALSLFEDDNLVDILKADCLFRMG
ECLFRLDQFTSTMHYFESARSIYVQAGIEDTVVHCLDMKGKSLFNLGLIEIALRTFCDLL
NEQRRLTEDETMDCDVAETLDLIYLCLIQLDRLKEAFVYKEEELDIHENILEELEDISNE
LTTVDQIVACKIAVADCLVKLGRNDDSIECRNDAVQDLEMTLNVKELPDAEKLPYLKLLR
QCYVHLKQDEKVVEIFEQEIQCDLAVNNAETDLDLAECYHLYGLFLVKIDKKTKGFGMFE
SELKILNDLTENSCNKSITLQKKAHCLLSQEKYISASELFMEQLTLEEKKSSNGNLPFWS
LVTTSKLADCYRNIAYCLDMSTNYKEALTYYNLELGMRRHLAESSGTSLPVADCFLQIGF
CYFKMNCVQDALDTFVQCSKISMDSACSTMASSICFLSQFGQGKCLREQGNYEEVVNICI
LALKSLVKSWQNPTEKLLLNEWLGPIDNNKSLATKRKCFEEHKSIVERLEKTNYYRLSEC
IQLIGTLLLETKTITN
Nucleotide sequence
Length: 3,471
>Phmamm.CG.MTP2014.S238.g05916.01.t
ATGTCTGCTGTGCTGTCTAGACTGGATTTAACATGGGCTGTGTTTGGTGAAGTGAAACAT
ATTGTGTTGGACACGGAACAGTACGTGCTGCGAGCTTGCGAGGTTTTGTTGTGCAAGCAA
CTCAGAACACTTTGTTACGCAAATGGTCGGGAAAAAGACAAAGAACAGTCCGCGGAGATT
TTGCGCCAACTAGCGGTGGTGTATCGGTTAAAAAGCCCAAATAAGTTAAGTTTGATACAA
AGTTGTGCTTTATTTAATGCTGCTGCAGCAAGAGAGGCAGACAACTTGGAAGAAATAGCA
AAGAACCTTCGAGAACTCTGTACGCATGTTTTAATGCTGGCTAGAGCTCGAAATGCTGAC
CTTGTAACGAAAACGGACGTCTTTTATGACATGGTTGAAAGAATGCGTAGCGACGTCGAA
AAAGAATTGGAAAATTTGACTGAAATAAGCGATAATGTGTCAAAGGACGAAAGGAAAAAC
ATGGAAGCCATGAGGGTTGAACAAATAAGAAAAATCCAAACATTTGTAACTGAAGAGTAT
TTAAATGTAATGAAAGAGATAATGACTTGTTGTATTGACATAAAAGGTCCACCACCGTGT
ATGTATGCCTTGGTGGGAATGGGGTCTCTTGCTCGAAACGAAATAACTCCATACTCAGAT
TTTGAAAACGTTATTTTACTGGAAGAGGGCGTACAGCATCGTCCGGATTACGAGGAAATT
TTGGAATACTTTCGATGGGTGGCTGTAATTTTCCAACTAATACTGGTCAACTTTGGGGAG
ACCATCGTTCGCTTTTTGAATATTGAAGGACTCAACGACCCATACAAGAAAGACGATGAT
TGGTTTTATGACCAGTACACTACATGTGGTATCTCACCAGATGGTTTTGCACCACACGCT
TCGAAAAACCCGTTAGGTCGGCCCAAAACTAAGCAAAAACCATGGGAAACTGAATTGATT
AAACCGATTAGCGGAATGCTTAAGTATCTTGAAACAGAAGAAGATTTAAAAAACGGATAT
CATCTTGCTGACATACTTCTGAAAACTTGTTTTGTCCAAGGAAATGATACAGTATATCAT
GAATTTCGCAAAGGGGTTAAGCACTTTCAAAGTCGAACACAGGACTTGTCCTTATTTCGT
AAGCAGCATGAAGAAGATTTAGATAACTTTGAATTAATGACGCGCTTATCTTCTATTAAC
TTTAGACAGCGGTTTGACATGAAGAGAACAATTTTTCGGATTGTTACCATCTTTATTGCG
TCTTTGGGCCGGTATCATCAATTGAATTCCACCTCATCACTTGACATCATACAGGAGCTG
GAAGAAAACTCAATTATCGACAAAGAATTCGGCAGCAGCCTAAAATACGCCGTAGCCGTT
GCATGTGAAATCAGATTAAAAGTTTACATGGAAAATCGTGCCCAGGCTGACCAGTTGTTT
TGGAACTCAAGTGAAAATGATATCAAAAACTTGGGTGTGGTAGAAGCTGTAGGCATTGGC
AGTTTAGTTTCCCTATTCCATACTGCTGAAAATTTGCAGTATTTTTTCGATGATACTGTA
CTAAAGTCGATGGCACCAGATCAAGATGAAGCTAGGAGAAAATCTTCAATAAATCCAAAT
AGAGTTGGCAACATCAAGCCAACTGTATGCATGACTTTTGGATTATACGAAAAGACAATC
GAAGAGTGTCACAAGCACTTGATGACTCACCCCCCTTCAAAACAGCGACAGTGGTTTGAA
GTTTTAATGGTTCACAGCCTTTATCGGTTGAAACGTTACGAAGATGCAAATGAAAAATGC
AAATCACTATTAAGTGAAACTGACGATCTGCGCCAACTATTGCTTTGCATATCTGGCGAA
TCATTGTTAAATCTTGGCCGCTACAAGGAAGGTCTTGCCCAACTGGAAATCGCATTATCT
CTGTTTGAGGATGATAATCTTGTTGATATTTTGAAGGCCGACTGTTTATTTCGTATGGGA
GAATGTTTGTTTCGCTTGGACCAATTTACATCAACCATGCATTACTTTGAATCAGCGCGA
AGCATTTATGTTCAAGCAGGCATCGAAGATACTGTAGTGCATTGTCTAGATATGAAAGGA
AAGAGCTTGTTCAATCTTGGACTAATTGAAATTGCATTGAGAACGTTTTGCGATTTGCTA
AATGAACAAAGGCGGCTTACGGAAGATGAAACAATGGATTGCGATGTTGCAGAGACTTTG
GACTTGATCTATTTGTGTCTGATACAACTTGACCGCCTAAAAGAAGCATTTGTGTATAAA
GAGGAAGAACTTGATATACATGAGAACATTCTTGAAGAGTTAGAAGACATTTCAAACGAA
CTTACCACAGTGGACCAGATTGTAGCCTGTAAAATAGCGGTTGCTGATTGTTTGGTGAAA
CTAGGACGAAACGATGACTCCATTGAATGTCGCAATGACGCTGTTCAAGATTTGGAGATG
ACATTAAATGTAAAAGAACTACCTGATGCTGAAAAACTTCCCTATCTCAAGTTGCTGAGA
CAATGTTATGTTCATTTAAAGCAAGATGAAAAGGTGGTTGAGATTTTCGAACAAGAGATT
CAATGTGATTTGGCGGTGAATAATGCTGAAACAGATCTGGATTTGGCCGAGTGTTATCAT
TTGTATGGTTTATTTCTGGTCAAAATTGACAAGAAAACAAAAGGATTTGGAATGTTTGAG
AGCGAACTCAAGATATTAAATGATTTGACAGAAAATTCTTGCAACAAGAGTATAACACTG
CAGAAAAAAGCACATTGCCTCCTTTCTCAAGAAAAGTACATCTCAGCATCAGAACTGTTT
ATGGAACAACTTACATTGGAGGAAAAAAAATCTTCTAATGGTAATTTACCTTTTTGGTCG
TTGGTAACGACATCTAAACTCGCAGATTGTTATAGAAACATCGCATATTGCCTGGATATG
TCAACAAACTACAAGGAAGCGCTTACGTACTACAATTTGGAACTTGGTATGAGGCGTCAT
TTGGCCGAAAGCAGTGGTACTTCTTTGCCAGTTGCTGACTGTTTCTTGCAAATCGGATTC
TGTTATTTTAAGATGAATTGTGTACAAGACGCTTTGGATACATTTGTCCAATGCAGTAAA
ATAAGTATGGATTCTGCATGCAGCACAATGGCCTCAAGCATTTGCTTTTTATCACAGTTT
GGCCAAGGGAAGTGTCTTCGTGAACAGGGAAACTACGAGGAAGTCGTTAACATTTGTATT
TTAGCATTAAAATCCCTTGTGAAAAGCTGGCAAAATCCAACTGAAAAATTGCTTTTAAAT
GAGTGGCTCGGTCCCATTGACAATAACAAAAGTCTTGCGACAAAACGAAAATGCTTTGAG
GAACATAAATCGATTGTTGAAAGATTAGAGAAAACAAACTATTATCGTTTGAGTGAATGT
ATACAGCTGATTGGCACATTGCTATTAGAAACCAAAACAATTACGAACTGA
| Pfam |
GlnD_Uridyltrans_N (IPR005105) - T[167-246] 4.6E-8 |
| Pfam |
DUF294_put_nucleoTrafse_sb-bd (IPR018821) - T[393-474] 4.7E-6 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[549-772] 7.8E-14 - T[773-957] 2.2E-6 - T[960-1153] 1.4E-11 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[586-773] 8.86E-12 - T[773-997] 1.34E-8 - T[918-1084] 1.73E-9 |
| SMART |
TPR_repeat (IPR019734) - T[612-645] 220.0 - T[653-686] 20.0 - T[917-950] 59.0 - T[968-1001] 22.0 - T[1012-1045] 14.0 - T[1056-1089] 130.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|