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  1. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S232.g05813.02.t

Possible name(s)

CDH11; CDH18; CDH6

Gene model

Phmamm.CG.MTP2014.S232.g05813

Location

S232 [139,264 / 140,086]

Sequences

Amino acid sequence

Length: 131

>Phmamm.CG.MTP2014.S232.g05813.02.p
MSSPPSTKVSLLPPYDPTSNKRRPIPSEDIRDFVIDRKAAEDDDDRKLAFDSLQIYVYEG
EGSDAGSLSSLCTSSDESVQDYDYLCEWGPRFKKIADIYGAGKPDYSDNSASKASADLMR
DTLSRPGRFKH

Nucleotide sequence

Length: 396

>Phmamm.CG.MTP2014.S232.g05813.02.t
ATGTCAAGTCCACCCTCAACCAAGGTCAGTCTGCTGCCACCTTACGACCCAACATCAAAC
AAAAGAAGACCGATTCCCAGTGAAGACATTCGCGACTTTGTGATCGACAGAAAGGCAGCT
GAAGACGATGATGACCGAAAACTCGCCTTTGATTCTTTGCAGATCTACGTATACGAAGGC
GAAGGTTCGGACGCTGGCTCCCTTAGTAGTCTTTGTACTTCGTCAGACGAAAGTGTACAG
GATTATGACTATCTCTGCGAGTGGGGACCCCGCTTTAAGAAAATTGCTGACATCTATGGA
GCCGGAAAACCTGACTATTCCGACAACAGTGCTTCTAAAGCCAGTGCTGATCTAATGAGG
GACACCCTCTCTCGACCTGGAAGGTTTAAACATTGA

InterProScan

Gene3D
Catenin_binding_dom_sf (IPR027397) - T[9-105] 7.0E-29
Pfam
Cadherin_cytoplasmic-dom (IPR000233) - T[25-101] 3.4E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CADH6_HUMAN 47.253 % 79.3 2.93E-18
CAD11_HUMAN 55 % 83.6 7.9E-20
CAD10_HUMAN 50.649 % 78.2 6.12E-18