- Transcript 'KH2012:KH.C9.38.v9.A...' >
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- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2328.g16541.02.t
Possible name(s)
FRRS1; GNB4; WDR44
Gene model
Location
S2328 [700 / 18,151]
Amino acid sequence
Length: 1,175
>Phmamm.CG.MTP2014.S2328.g16541.02.p
MTPNTTVDNITKEFADALNKDAMQKQQPMKFETNETNSVKSSFRKSFSSFKQRRQSHESV
QSTESDATTVKDKVQPTNTATTQQQQTTHNKHDEEILSTVIVRNLDTGQTMPLSVAAEQV
SQCLNPLALQIMSRTKEFSCATGGATEEAPPQTPSQKENLASVEIAQSVASEEETMSVAS
DDITIGLEVGSGKPNWGGGRMKAAAETKVEKAVQKVKQAKQDGSHAESLNVSTDEEISDS
FVNLSVKTKNSSSHKGPYHFTHLKMVQDIAVHVGAVWSMKFSHCGRLLATAGQNNIIWIW
VLKEWFHFFNDMRKKYDSKERGAVFATPPRGSMDPPPASSDDISDAGDAESDQLEEDVDA
PFKSLPFSSYFGHTADVLDLAWSKVRSFVDNKINEDGLEVGSGKPNSESSSKKIRTKSKR
FKKIIGKGARRMKAAAETKVEKAVQKVKQAKQDGSHAESLNVSTDEEISDSFVNLSVKTK
NSSSHKGPYHFTHLKMVQDIAVHVGAVWSMKFSHCGRLLATAGQNNIIWIWVLKEWFHFF
NDMRKKYDSKERGAVFATPPRGSMEPPPASSDDILDAGDAESDQLEEDVDAPFKSLPFSS
YFGHTADVLDLAWSKDDRYFLSGSLDGKLRLWNIPDKKVALWNEVGPDSSASTSSSGGGA
LITTVNFCENGKFAVCGTYDGRCLFYDTEHLKYHTQIHVRSSRGRNQKGHKITGIEPLAN
EHKILDSAAKDNVTHLTNGGEVWNVGVAKGCDSNCASVEWIPSQDSVKFTLKGNNTGYIA
VAISSNQAMGPHDDAYICARSSPTSSDVKIYSAYLVGHHPPGIVGTVMGNTSFADGMLSC
TFSRPMSVTKSVGGKNVTWDVSSSNFHLLYAEGIVNTSGNVQYHQSGHRMATHDAYLLAG
EFAGNIGSSTPVSVTSGPLQSTTSVPLQSTTSEETTSGKDNITHLTNGGEVWNVGVAKGC
DSNCASVEWIPSQDSVKFTLKGNNTGYIAVAISSNQAMGPHDDAYICARSSPTSSDVKIY
SAYLVGHHPPGIVGTVMGNTSFADGMLSCTFSRPMSVTKSVGGKNVTWDVSNSNFHLLYA
EGIVNTSGNVQYHQSGHRMATHDAYLLAGNQQTDLTTQTSSSTTTKSTATQSPTTQPSPT
VGMESTTSGAVQLIATSLVSVLIVTLCSMKNILDN
Nucleotide sequence
Length: 3,528
>Phmamm.CG.MTP2014.S2328.g16541.02.t
ATGACCCCAAATACGACGGTGGACAACATTACCAAAGAATTTGCAGATGCGCTCAACAAA
GATGCGATGCAAAAACAACAACCGATGAAATTTGAAACAAATGAAACGAACTCCGTTAAA
TCGAGTTTTCGAAAAAGTTTTTCATCTTTTAAACAACGACGCCAGTCTCATGAAAGTGTT
CAATCTACCGAAAGTGATGCAACAACTGTAAAAGATAAAGTCCAACCTACAAACACGGCA
ACAACCCAACAACAACAAACTACACACAACAAGCATGACGAGGAAATTTTATCGACAGTA
ATTGTCCGAAATCTCGATACTGGGCAAACAATGCCACTAAGTGTCGCTGCAGAGCAGGTT
TCACAATGCCTTAATCCACTAGCGTTGCAAATAATGAGCCGGACGAAAGAATTTTCATGT
GCCACCGGAGGTGCTACGGAGGAAGCCCCACCCCAGACGCCATCACAAAAAGAAAACCTC
GCTTCAGTGGAGATTGCACAATCTGTGGCATCAGAAGAGGAGACGATGTCTGTTGCAAGC
GATGACATCACAATCGGTTTGGAAGTAGGCTCAGGGAAGCCGAACTGGGGGGGGGGTCGA
ATGAAGGCTGCAGCGGAAACAAAAGTTGAGAAAGCCGTGCAGAAAGTGAAGCAAGCAAAA
CAAGATGGGTCTCATGCCGAGTCGTTGAATGTTTCGACCGACGAGGAAATTTCAGACTCA
TTTGTGAATCTTTCGGTAAAAACTAAAAACTCTTCGTCGCACAAAGGACCTTACCACTTC
ACACATCTCAAAATGGTGCAAGACATTGCTGTCCATGTGGGCGCAGTATGGAGCATGAAG
TTTAGTCACTGTGGCCGACTACTTGCCACTGCCGGACAAAACAACATCATATGGATCTGG
GTTTTAAAGGAATGGTTTCACTTCTTCAATGACATGAGAAAGAAATACGACAGCAAAGAA
CGAGGAGCAGTGTTTGCTACACCACCGCGTGGCAGTATGGACCCTCCTCCTGCATCGAGC
GATGATATTTCAGATGCAGGGGATGCAGAGTCGGATCAGCTGGAAGAAGATGTGGATGCT
CCGTTCAAATCTCTTCCTTTCTCTTCGTACTTCGGACACACTGCCGATGTTCTAGACCTC
GCTTGGTCGAAGGTAAGAAGTTTTGTTGACAATAAAATTAATGAAGATGGTTTGGAAGTT
GGGTCGGGGAAGCCGAACTCGGAAAGCAGCAGCAAAAAGATTCGAACCAAAAGCAAAAGG
TTCAAGAAAATTATCGGAAAAGGCGCTCGACGAATGAAGGCTGCAGCCGAAACAAAAGTT
GAAAAAGCCGTGCAGAAAGTGAAACAAGCGAAGCAAGATGGGTCTCATGCCGAGTCGTTG
AATGTTTCGACCGACGAAGAAATTTCAGACTCGTTTGTGAATCTTTCGGTAAAAACTAAA
AACTCTTCATCGCATAAAGGACCTTACCACTTCACACATCTCAAAATGGTTCAAGACATT
GCTGTTCATGTGGGTGCAGTATGGAGCATGAAATTTAGTCACTGTGGCCGTCTACTTGCC
ACTGCCGGACAAAACAATATCATATGGATCTGGGTTTTGAAAGAATGGTTCCACTTCTTC
AACGACATGAGAAAGAAATATGACAGCAAAGAACGAGGAGCAGTGTTTGCTACACCACCG
CGTGGCAGCATGGAGCCTCCTCCCGCATCAAGTGATGATATTTTAGATGCAGGTGATGCG
GAGTCAGATCAACTTGAAGAAGATGTGGATGCACCGTTTAAATCTCTTCCCTTCTCCTCG
TACTTCGGACACACTGCCGATGTGCTCGACCTTGCTTGGTCAAAAGACGACAGATATTTC
CTCAGCGGTTCGTTGGACGGCAAACTCCGCCTGTGGAATATTCCGGACAAGAAAGTTGCT
TTGTGGAACGAAGTTGGACCAGATTCGTCTGCTTCTACCAGCAGTAGCGGAGGTGGGGCT
TTGATAACAACCGTCAACTTTTGTGAGAATGGGAAGTTCGCCGTATGCGGAACTTACGAC
GGAAGATGTTTGTTCTACGACACAGAGCACTTGAAGTACCACACACAAATCCACGTTCGT
TCGTCACGTGGTCGAAATCAGAAGGGACACAAAATTACGGGAATTGAACCACTCGCAAAT
GAGCACAAGATACTGGACTCTGCGGCAAAAGACAACGTCACTCATCTTACAAACGGAGGA
GAGGTGTGGAATGTCGGAGTAGCGAAAGGTTGCGACTCGAACTGTGCGAGTGTTGAGTGG
ATTCCAAGTCAAGATTCGGTCAAGTTCACGTTGAAAGGAAATAACACAGGATACATCGCT
GTAGCGATTTCGAGCAACCAAGCTATGGGACCACATGATGACGCGTACATCTGCGCTCGA
AGCAGCCCTACATCAAGCGATGTGAAAATATATTCTGCCTATTTAGTCGGACATCATCCG
CCGGGAATTGTGGGAACGGTGATGGGAAACACAAGCTTCGCTGATGGGATGTTGTCGTGC
ACTTTCTCGCGTCCCATGAGCGTGACGAAGTCGGTTGGCGGGAAGAATGTCACGTGGGAC
GTTTCAAGTAGCAACTTTCACTTGTTGTACGCAGAAGGAATCGTGAACACGAGTGGAAAC
GTTCAATACCACCAAAGTGGCCACAGGATGGCGACACACGACGCTTATTTGCTCGCTGGG
GAATTTGCTGGTAACATTGGATCAAGCACTCCTGTATCTGTGACATCCGGACCACTACAA
TCCACTACATCCGTGCCACTGCAGTCTACAACATCAGAAGAGACAACGTCGGGTAAAGAC
AACATCACTCATCTTACAAACGGAGGAGAGGTGTGGAATGTCGGAGTAGCGAAAGGTTGC
GACTCGAACTGTGCGAGTGTTGAGTGGATTCCAAGTCAAGATTCGGTCAAGTTCACGTTG
AAAGGAAATAACACAGGATACATCGCTGTAGCGATTTCGAGCAACCAAGCTATGGGGCCA
CATGATGACGCGTACATCTGCGCTCGAAGCAGCCCTACATCAAGCGATGTGAAAATATAT
TCTGCCTATTTAGTCGGACATCATCCGCCGGGAATTGTGGGAACGGTGATGGGAAACACA
AGTTTCGCTGATGGGATGTTGTCGTGCACTTTCTCGCGTCCCATGAGCGTAACGAAGTCG
GTTGGCGGGAAGAATGTCACGTGGGATGTTTCAAACAGCAACTTCCACTTGTTGTACGCG
GAAGGGATCGTGAACACGAGTGGAAACGTTCAATACCACCAAAGTGGCCACAGGATGGCG
ACACACGACGCTTATTTGCTCGCTGGGAACCAACAAACCGATTTGACTACACAGACATCA
TCATCAACAACAACAAAATCCACAGCTACACAGTCACCAACCACGCAACCATCTCCAACT
GTTGGAATGGAAAGCACTACATCCGGAGCAGTACAGCTCATCGCAACTTCTCTCGTTTCG
GTCCTAATTGTCACCCTATGCTCGATGAAAAATATTTTAGACAATTAA
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[261-717] 2.87E-27 |
| SMART |
WD40_repeat (IPR001680) - T[262-301] 2.6E-4 - T[493-532] 2.6E-4 - T[594-633] 2.5E-9 - T[648-687] 2.3 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[269-300] 9.305 - T[500-531] 9.305 - T[601-634] 14.652 |
| Pfam |
WD40_repeat (IPR001680) - T[271-300] 0.24 - T[502-531] 0.24 - T[599-633] 5.0E-6 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[601-642] 13.106 |
| ProSiteProfiles |
DOMON_domain (IPR005018) - T[754-873] 11.533 - T[963-1082] 11.637 |
| SMART |
DOMON_domain (IPR005018) - T[778-873] 1.7E-4 - T[987-1082] 8.6E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR44_HUMAN | 47.042 % | 311 | 1.85E-90 |