- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.S988.1.v2....' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2328.g16541.01.t
Possible name(s)
FRRS1; GNB4; WDR44
Gene model
Location
S2328 [685 / 12,440]
Amino acid sequence
Length: 718
>Phmamm.CG.MTP2014.S2328.g16541.01.p
GEDGLMTPNTTVDNITKEFADALNKDAMQKQQPMKFETNETNSVKSSFRKSFSSFKQRRQ
SHESVQSTESDATTVKDKVQPTNTATTQQQQTTHNKHDEVRDENWSEITKNTVLRIDSSP
PLEILSTVIVRNLDTGQTMPLSVAAEQVSQCLNPLALQIMSRTKEFSCATGGATEEAPPQ
TPSQKENLASVEIAQSVASEEETMSVASDDITIGLEVGSGKPNSESSSKKIRTKSKRFKK
IIGKGARRMKAAAETKVEKAVQKVKQAKQDGSHAESLNVSTDEEISDSFVNLSVKTKNSS
SHKGPYHFTHLKMVQDIAVHVGAVWSMKFSHCGRLLATAGQNNIIWIWVLKEWFHFFNDM
RKKYDSKERGAVFATPPRGSMEPPPASSDDILDAGDAESDQLEEDVDAPFKSLPFSSYFG
HTADVLDLAWSKNYFTLSSSMDKTVRLWHVSQKECLCCFQHIDFVTAISFHPRDDRYFLS
GSLDGKLRLWNIPDKKVALWNEVGPDSSASTSSSGGGALITTVNFCENGKFAVCGTYDGR
CLFYDTEHLKYHTQIHVRSSRGRNQKGHKITGIEPLANEHKILITSNDSRVRLYDLRDLS
LTCKYRGLTNLSSQIKATFSPDNNFIICGSEDKSIFIWRTNLPPDVTKISSFRRDRNDCW
ESIRAHNAVVTCAIFAPKPQRREKLESTLPAKTKSSSNESYVIISADFNGVIKIFSTT
Nucleotide sequence
Length: 2,460
>Phmamm.CG.MTP2014.S2328.g16541.01.t
GGAGAAGATGGATTAATGACCCCAAATACGACGGTGGACAACATTACCAAAGAATTTGCA
GATGCGCTCAACAAAGATGCGATGCAAAAACAACAACCGATGAAATTTGAAACAAATGAA
ACGAACTCCGTTAAATCGAGTTTTCGAAAAAGTTTTTCATCTTTTAAACAACGACGCCAG
TCTCATGAAAGTGTTCAATCTACCGAAAGTGATGCAACAACTGTAAAAGATAAAGTCCAA
CCTACAAACACGGCAACAACCCAACAACAACAAACTACACACAACAAGCATGACGAGGTC
AGGGACGAAAATTGGTCAGAAATAACCAAGAATACGGTTTTACGGATCGATTCGTCGCCA
CCTCTCGAAATTTTATCGACAGTAATTGTCCGAAATCTCGATACTGGGCAAACAATGCCA
CTAAGTGTCGCTGCAGAGCAGGTTTCACAATGCCTTAATCCACTAGCGTTGCAAATAATG
AGCCGGACGAAAGAATTTTCATGTGCCACCGGAGGTGCTACGGAGGAAGCCCCACCCCAG
ACGCCATCACAAAAAGAAAACCTCGCTTCAGTGGAGATTGCACAATCTGTGGCATCAGAA
GAGGAGACGATGTCTGTTGCAAGCGATGACATCACAATCGGTTTGGAAGTTGGGTCGGGG
AAGCCGAACTCGGAAAGCAGCAGCAAAAAGATTCGAACCAAAAGCAAAAGGTTCAAGAAA
ATTATCGGAAAAGGCGCTCGACGAATGAAGGCTGCAGCCGAAACAAAAGTTGAAAAAGCC
GTGCAGAAAGTGAAACAAGCGAAGCAAGATGGGTCTCATGCCGAGTCGTTGAATGTTTCG
ACCGACGAAGAAATTTCAGACTCGTTTGTGAATCTTTCGGTAAAAACTAAAAACTCTTCA
TCGCATAAAGGACCTTACCACTTCACACATCTCAAAATGGTTCAAGACATTGCTGTTCAT
GTGGGTGCAGTATGGAGCATGAAATTTAGTCACTGTGGCCGTCTACTTGCCACTGCCGGA
CAAAACAATATCATATGGATCTGGGTTTTGAAAGAATGGTTCCACTTCTTCAACGACATG
AGAAAGAAATATGACAGCAAAGAACGAGGAGCAGTGTTTGCTACACCACCGCGTGGCAGC
ATGGAGCCTCCTCCCGCATCAAGTGATGATATTTTAGATGCAGGTGATGCGGAGTCAGAT
CAACTTGAAGAAGATGTGGATGCACCGTTTAAATCTCTTCCCTTCTCCTCGTACTTCGGA
CACACTGCCGATGTGCTCGACCTTGCTTGGTCAAAAAATTACTTCACTCTTTCATCTTCA
ATGGACAAGACCGTTCGTTTGTGGCATGTTTCACAGAAGGAGTGTTTGTGTTGCTTCCAG
CATATTGACTTCGTTACAGCGATTTCGTTTCACCCAAGGGACGACAGATATTTCCTCAGC
GGTTCGTTGGACGGCAAACTCCGCCTGTGGAATATTCCGGACAAGAAAGTTGCTTTGTGG
AACGAAGTTGGACCAGATTCGTCTGCTTCTACCAGCAGTAGCGGAGGTGGGGCTTTGATA
ACAACCGTCAACTTTTGTGAGAATGGGAAGTTCGCCGTATGCGGAACTTACGACGGAAGA
TGTTTGTTCTACGACACAGAGCACTTGAAGTACCACACACAAATCCACGTTCGTTCGTCA
CGTGGTCGAAATCAGAAGGGACACAAAATTACGGGAATTGAACCACTCGCAAATGAGCAC
AAGATACTGATCACATCAAACGATTCCCGTGTCAGGTTGTACGATCTTCGTGACCTTTCC
CTTACTTGCAAATATCGCGGTCTTACAAACCTGAGCAGTCAGATTAAAGCGACTTTCAGC
CCGGACAATAACTTCATCATTTGTGGATCTGAGGACAAATCGATTTTCATCTGGCGGACA
AATCTGCCTCCTGACGTCACGAAAATCTCGTCGTTCAGAAGAGACAGAAACGATTGTTGG
GAGAGCATTAGAGCTCACAACGCGGTGGTCACGTGCGCAATTTTCGCGCCAAAACCTCAG
CGAAGGGAAAAATTGGAATCGACACTTCCCGCCAAAACGAAGAGCTCATCCAACGAGAGT
TACGTCATCATTTCTGCAGACTTTAATGGCGTCATAAAGATATTCTCCACCACGTGACAA
TGGCGAGTGTTACGTCACAGTGGAATAGGAAGCAATATGATGTTTATGAATCTGTGCAAT
TCGTTACTTTTCGTTTATTTTTGCCAAAAACTTTTGAGACTTTTCGGCGATACAAGGTTC
TTACGTCACAGAACACTTTCGTTTATGACGTCATAGTACCGAACAACGAAGTTATTGCGA
ACTGAAAACTGTTTGTGACGTCATAGCTTGCCTTTTATGTTTTCGTTCTTTGAATGTTCC
CGCACTTTTGGTCACGTGGTGTTCCTTGTGATCACGAGATTAAAATTCTCGATTCTGATT
| SMART |
WD40_repeat (IPR001680) - T[310-349] 2.6E-4 - T[411-449] 3.1E-5 - T[452-491] 1.9E-8 - T[506-545] 2.3 - T[553-595] 32.0 - T[598-639] 0.13 - T[656-716] 1.6 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[310-716] 2.2E-51 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[317-348] 9.305 - T[418-451] 10.909 - T[458-492] 11.444 - T[619-638] 9.071 |
| Pfam |
WD40_repeat (IPR001680) - T[319-348] 0.13 - T[416-448] 3.0E-4 - T[454-491] 0.0013 - T[615-638] 8.4E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[418-648] 17.218 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AHI1_HUMAN | 27.391 % | 88.6 | 6.33E-18 |
| WDR44_HUMAN | 50.734 % | 596 | 0 |