- EST 'AHC0AAA223YB16_RM1' >
- EST 'AHC0AAA223YP14_RM1' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S231.g05780.01.t
Possible name(s)
CENPJ; DHX36; YTHDC2
Gene model
Location
S231 [77,147 / 83,131]
Amino acid sequence
Length: 1,069
>Phmamm.CG.MTP2014.S231.g05780.01.p
MDGAVPSCTEIDTLFDKLEDTKGTSHDDVMKKLQAIRLWQLMQQEELKKQQQSQLALLKG
QGEDTKEDLDAMSDSSDNDEQEELEEPSDDDIESVDEVLAFPLDDASCGQLETIAEQPSV
VDISDAESADCEKDVANSVISDSEFLSEVDDQEKSDNEDGENKVENEESEKKNRLLVDEE
AHEIPKQSDRQLCFDDVPVAGGGNKKTFEQLLADQLKLNDNIDKTAKKNTASTPKRTFLR
RGQGIARFKGPPIRAKKKVPQATQASSATKVAPTEASVKPVTNTIHQTERPLSDAIPVQE
NNEEKKPVTRIRKTARKKEPIKELKLKPVSPKPHVHFQNPISSFPNPGFDYEENLLDDHG
EQDINENLDDTLKDENALLQESVWSDVNDSVLSINTTAIGNLGPIDFDKTSNETFEQMEK
FCNQRYGSDSPMKKEEKIKLMQSLFPSLGPKTVNVPKSIVPPKENTAASNPVSTKQDEQP
KILKTKLEEMECEIKKFQDETCKLSSVRKQEEEQLRVLKKEFEEFQKQKEDELQRLDDFK
KMETKKLKKERKLFEDHITAVKSLPNKKDREYIRELEKNICELQDEFKVKEQRLTAANNR
LRTQLDTANKDNELLKERLHAAEEQIEILKKGDEKRRSKKSGAVWKAINNIVDSTTIDEN
EPTTDICVPETKTPVITNVFPKPVIQKKREPLVDRNDNHLCKNQEDMPTEGRKIERKLQD
GSHEISYSNGTKKVVSADGTNTNVQFANGDVKTIGADGSVSYMYKSSGTKHTTHTNGMQV
IEFSNKQIERHFPDGSKHISFADGSSKMMKLNDGTVMVVKPNGHKTIEFSNGQREIHTAE
YKRREYPEEIEFPSSFTSVERAFLHRKANQLGLISKSVGKGANRYLTLRKKKSDETLESP
MIFRLGQNSKQVLQALLHKWPMKQKEKLEIQPKLDGQQHPCASSIAYRSDANKPSGRLPN
GIPQVPMKRSPSDLDAFRKTLPVHNMKDEIIKTIWNNSVVLISGDTGSGKTTQIPQFILD
ESLRRNEVCRIVCTQPRRISAVAMAERVAIERGESVGQTVGYQIRLESR
Nucleotide sequence
Length: 3,210
>Phmamm.CG.MTP2014.S231.g05780.01.t
ATGGATGGTGCAGTGCCTTCATGCACAGAAATTGATACATTGTTTGATAAACTGGAAGAC
ACCAAAGGCACGAGTCATGATGATGTGATGAAAAAGCTTCAGGCCATACGCTTATGGCAG
TTAATGCAACAAGAAGAACTTAAGAAACAGCAGCAATCGCAACTCGCCTTGCTGAAAGGA
CAAGGAGAAGACACAAAAGAGGACTTGGATGCTATGTCTGATTCTAGCGATAATGATGAA
CAGGAAGAACTTGAAGAGCCATCAGATGATGATATTGAAAGTGTTGATGAAGTTTTGGCT
TTTCCATTAGATGATGCTTCTTGCGGGCAGTTGGAAACTATTGCTGAGCAACCATCAGTT
GTTGATATTTCAGATGCTGAAAGTGCTGACTGTGAGAAAGATGTTGCAAATTCTGTGATT
TCTGATTCTGAGTTTTTGTCAGAAGTTGATGATCAAGAAAAATCAGATAATGAAGATGGA
GAAAATAAAGTAGAAAATGAGGAAAGTGAGAAGAAGAATAGATTGCTTGTGGATGAAGAG
GCACATGAGATCCCAAAGCAGAGTGATAGACAACTTTGCTTTGATGATGTTCCTGTTGCA
GGTGGAGGAAACAAAAAGACTTTTGAACAACTGTTGGCAGATCAGTTAAAGTTAAACGAT
AACATTGATAAGACTGCAAAGAAAAATACTGCTTCTACACCAAAGCGCACATTTCTGAGA
AGAGGACAAGGCATTGCTCGATTTAAAGGACCGCCAATAAGAGCAAAAAAGAAAGTGCCA
CAAGCAACTCAAGCTTCATCTGCCACAAAAGTTGCACCAACAGAGGCCAGTGTAAAACCA
GTAACAAATACTATTCACCAAACTGAAAGGCCCCTATCAGATGCTATTCCTGTTCAGGAA
AATAATGAGGAAAAAAAGCCAGTCACGAGAATACGAAAAACTGCTAGAAAGAAGGAGCCA
ATAAAGGAATTGAAGCTAAAACCTGTAAGCCCAAAGCCTCACGTACATTTTCAAAACCCA
ATTTCTTCATTTCCAAATCCTGGTTTTGATTATGAAGAAAATTTGCTCGATGATCATGGG
GAACAAGATATAAATGAAAATCTTGATGACACTTTGAAAGATGAAAATGCACTGTTACAA
GAGTCAGTTTGGTCTGATGTTAATGATTCTGTTTTATCAATTAACACCACTGCAATTGGC
AATTTAGGCCCAATTGACTTCGACAAAACATCCAATGAAACTTTTGAACAAATGGAAAAG
TTCTGCAATCAAAGATATGGTTCAGATTCTCCCATGAAAAAGGAAGAAAAAATCAAGTTA
ATGCAAAGTCTGTTTCCCTCTTTGGGTCCTAAAACCGTAAATGTGCCAAAATCTATTGTA
CCACCAAAGGAAAACACTGCTGCCTCAAACCCAGTGTCTACTAAGCAAGATGAGCAACCT
AAAATCCTCAAAACTAAGTTGGAAGAAATGGAATGTGAAATAAAGAAATTCCAAGATGAA
ACATGTAAACTCAGCTCAGTACGCAAGCAAGAGGAAGAACAGTTGCGTGTGTTGAAAAAA
GAATTTGAGGAGTTTCAAAAACAGAAGGAGGATGAGCTACAACGGCTGGATGACTTCAAA
AAAATGGAAACCAAAAAATTGAAAAAAGAAAGAAAACTTTTTGAAGATCACATCACCGCC
GTCAAGTCGTTGCCAAACAAAAAAGACCGTGAATATATTAGAGAGCTTGAGAAAAATATC
TGTGAGCTTCAGGATGAGTTTAAAGTGAAGGAACAGCGCCTAACTGCTGCAAACAATCGA
TTACGAACCCAATTAGATACTGCAAATAAAGATAATGAACTGCTGAAGGAAAGGTTACAT
GCTGCTGAAGAGCAAATAGAAATATTGAAAAAAGGGGATGAAAAAAGGCGAAGTAAAAAA
TCAGGTGCTGTATGGAAAGCAATCAACAATATTGTTGATTCTACAACAATTGATGAAAAT
GAACCTACCACTGATATCTGTGTGCCAGAAACCAAAACTCCTGTGATTACAAATGTGTTT
CCAAAGCCTGTAATACAGAAAAAGCGGGAGCCACTTGTTGACAGAAATGACAACCATTTG
TGCAAAAACCAAGAGGACATGCCAACTGAAGGTCGAAAGATTGAACGAAAATTGCAGGAT
GGTTCTCATGAAATATCCTACAGCAATGGTACCAAAAAGGTGGTTTCTGCTGATGGAACC
AATACCAACGTACAATTTGCTAATGGAGATGTCAAGACAATTGGTGCTGATGGTTCTGTA
TCTTACATGTACAAATCGTCAGGTACCAAGCACACAACTCACACCAATGGCATGCAAGTG
ATTGAGTTTAGCAACAAGCAAATTGAAAGGCATTTTCCTGATGGCTCCAAGCATATATCA
TTTGCTGACGGATCCAGTAAAATGATGAAACTTAATGATGGAACAGTTATGGTAGTCAAA
CCAAATGGTCACAAGACAATAGAGTTCAGTAATGGGCAGCGTGAGATTCACACGGCCGAG
TACAAGCGCAGAGAGTATCCTGAAGAAATTGAGTTTCCCTCGTCTTTTACAAGTGTGGAA
AGAGCTTTCCTTCATCGAAAGGCAAATCAACTTGGCCTTATCTCAAAAAGTGTTGGTAAG
GGTGCAAATCGATACTTAACACTGAGAAAAAAGAAATCCGATGAGACTCTTGAATCTCCT
ATGATATTTCGGCTTGGACAAAACTCAAAGCAAGTTTTGCAGGCACTACTTCACAAATGG
CCAATGAAGCAAAAAGAAAAACTAGAAATTCAACCAAAACTAGATGGTCAACAACATCCT
TGTGCAAGTAGTATTGCTTATAGATCTGATGCAAACAAACCCAGTGGCCGGCTGCCAAAT
GGAATCCCCCAAGTTCCAATGAAAAGGTCTCCATCAGATCTTGATGCCTTTCGCAAGACT
TTACCAGTTCACAATATGAAAGATGAAATAATCAAAACTATTTGGAACAACTCTGTGGTG
CTGATTTCTGGCGACACAGGGTCAGGCAAGACAACACAGATTCCCCAGTTCATTTTGGAT
GAAAGTCTTCGTCGCAATGAAGTTTGTCGAATTGTGTGCACCCAACCTAGACGAATATCT
GCTGTGGCTATGGCCGAGCGAGTTGCTATTGAACGAGGCGAATCTGTTGGACAGACAGTT
GGATATCAGATACGACTTGAGAGCAGGTGA
| PANTHER |
TCP10_fam (IPR026581) - T[259-631] 1.8E-97 - T[702-848] 1.8E-97 |
| Pfam |
Tcp10_C_dom (IPR009852) - T[715-848] 8.2E-46 |
| SMART |
R3H_dom (IPR001374) - T[821-891] 0.0057 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[826-892] 11.42 |
| Gene3D |
R3H_dom_sf (IPR036867) - T[836-897] 9.0E-13 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[847-891] 6.67E-9 |
| Pfam |
R3H_dom (IPR001374) - T[848-890] 7.6E-8 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[978-1067] 2.44E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| YTDC2_HUMAN | 54.299 % | 244 | 3.63E-66 |
| DHX36_HUMAN | 55.446 % | 115 | 5.37E-26 |
| CENPJ_HUMAN | 34.513 % | 239 | 6.78E-65 |