- Transcript 'KH2012:KH.L171.11.v1...' >
- Transcript 'KH2012:KH.L122.5.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S230.g05761.01.t
Possible name(s)
HMCN1; HMCN2; HSPG2
Gene model
Location
S230 [112,263 / 146,967]
Amino acid sequence
Length: 3,300
>Phmamm.CG.MTP2014.S230.g05761.01.p
MQLDSSLSLNFLNRRIRRASTDLDVVAGSGSEATLDDLAPPVNPSNEVDQSTSGTDWIWY
RNDINFLDSIALTPNLKDHHTDEFYDLAGEIMVLLEDYLASQFDGYLEATPLMFTQSGND
AILMVDVGTCESISSDEITNAMVSLVRGGTLGRFRLSPYPFKIKYIGTDPGREECQVTVA
PTEPFTTTFTVADEFDVTTATATTTTTEPTPPDAYSSEDDGPVSCGPGQATCKNLQCIDR
LYVCDGAIDCYDGSDEDSCSTGTSSECDPTQFLCIGTAICAQKHWRCDGDDDCGNGFDER
NCPNEPNGACPSTHFQCGDGSCVPGSYQCDGEQDCEDNSDERGCSAPVIIVPPPNRMEAK
QGETVTMRCEGVGTPTPIISWRVNWGNVPPEPRVTMTSRDGVGTLTIRKVKPSDQGAYTC
EGLNRGGAILAVPDLVLVVTDSEPTATSIPPPLSSPTPADETEECPPGEFNSSSDATGGC
KRCFCFGVTDQCHSSNFEFKEIGITFDEPEDVSVVDLEPAEIEGGVPGSPEPINSNQITV
NPAAKELQLIDFNQITVNPAAKELQLIDLSKRFLAAAHYWSLPAQFLGAKINSYGGTLKF
SFSYNNSYNFPSLPTNNSDVILVGNGQTLVYRDDRPHPSPVNKHTTEAVFDEEKWKKPDG
TPVTREDMLTVLSNISSVLLRTAYDNSMLSTGIGDVSLQVAEPKEKTSSPVSAGVIASSV
EECICPEGYTGLSCEECNIGYERHMTGPYIGECIPTSAPIKVCKKGYTGKNCTECAKGYS
PYLGGCTRYPDTYCDVAGSIGVGFGQTCQCKEGCQGPRCNECKPGHYFLSEANAGGCLSC
FCMGITDQCTSSNLNRSHVIPNYDRSENFVLTNAAGVETYQNDVVFVTATENRRHPYVVA
HLDQLHSDVFYWMLPDEFLGNKLTSYGGQFDYIVQYEQGNSARPITRIADLRLTGNGQTL
IHVSGRHPPPGTDTRYVVPIQENNWQKPDGSQASREDLLMVLSNIESFLVRASYSNQMLE
SRITSMYLVTAVDRETGRERALEVEKCRCPVGYRGLSCEACSHNTVGDNCEVCASGYYGD
ARAGGVDDCQPCPCPTLGGRTDQVSRPTCRMGRGGQPVCDRCPIGYTGDRCERKAHRVPT
VVNADRVSSISASSTTADVCPASAWDSPDSAPPQAINVVADFSEDNGGFMLTNRQLNTQT
TDGFEVVDGFNSLSYPRMETLPRGITYYWRLSEEYQGDKIVSYGGQLNYSVGFTAYRRGS
PINEPDVILRGNDIELYSYIPGDVVQNALTERGTVFHEKYWTRADGQAATREHLLMALAD
VEEILIQATYSTTTLRTTISQVTMETASESAIMSEPALEVEHCVCPDGYEGLSCEDCAPG
YTRSGGGIYLGLCTACQCNGHAELCDTETGECLNCRNNRAGAHCENCAPGYFGNPNVENG
CRPCACPGIGKNSFSDTCDYDTTSNTLTCTACQEGYTGDRCESCATGYVGNPTDPVDGSC
VRIDENHVSDSPDLPRVSVSPKHVNANPGQTVTLRCAVVSRSRVRITWERSGQGLPSNTL
VTNNGQTLTLPNVGRSSVGTFECVVANRYGSASDSAVVTLARPQPMIAVHVEEPRQVTVQ
VGSEVSFVCTAASKVPEAFIVTWTKRGGRLPLNRATDFDGILHITNVDLSDSGTYMCTGS
SMYGIAQESATLRVIQVDDAATPVVVVTPNNQSVMKGDDVIFYCNAEGYPDPEVEWQRVD
GNPMSNNVHVSGQMLMIPSASMHDRALYRCRASNQHGTAEATGALEVFDGVPPVVTVVTP
EVSVIIGESVALRCTATGEPAPTFSWVKRGRLLPPNSFEEGGILRIESAVTNNEGVYQCT
AHNTFGQDSGFVRVDVLPQVPAEKPICRTEPQEVTAYVGTNSTTTCYIGGTPMPTMTWER
EDGLPLDENIVVKDNKLQVIEVQDSNAGRYVCVATSAGGVTKSRMTLNVVKKDLPHVTVV
PARTQRVQVGDNVEFNCQTNESDADVTWLRSNQRPFTGQTSLSGDNRIIRFQNVSLRESG
YYSCIASNVVGHREVLVYMEVLQKPVIKVLPARIITLRDGESVALRCMAEGNSRPSVTWK
KLSATEGVHPTSGYEAPIVTVGTSLKHVTVGTEVQLRCVASGTPAPTIVWSKENQDLPAG
SRQSEGILYIPQFMTEDAGKYVCKAANELGMDEKSVDVELQFITFNPVPPSLAVKPSAVV
SLAPGQSTNITCSAISGTPPVAFSWKKDDGVASSVLTAGGLMQVTGFDPLTDAGVYTCIG
TNDAGSSTTSLTILEANPPVIQVQPTEVTKTVGDFIEFQCTPDGDALDVEISWSRVDGQS
LPEDRALTNLNGRLAIEDIQVADAGVYQCTASNAAGTTSDTVTLQVQAAPTAFIDLIGNE
DILIEGRTYEIFCNSSGIPKPDMFLYKGDTQLPLDDESRHAMNGTASDSGTYACVANNSV
GTTRDTLDVLIHGSPEVKVEPTFLEVRAHEPLTLSCLVNSTLASNITWSKQDGELSPNMN
EVLDLGNALPENSGVYVCSAANQVGSVQQQATVVVHSFIPFFSQTERSYVAMDLTPNQFY
ISFNIKLSFRANSLNGLLLYAFSMGSDFISLNMADGYLDFRFDVGSGSVTIRSASAAVIG
EWHTVVISRNGKTGEIRLDDGEVVKGKSPGEFRALDVDSQLYLGGIPRDLDGRLPREIQN
LGHDLGFYGCISQLEVNTEVIDMGSPEVNRVGIVRCKTCGADKSDSPCYNEGMCVETYDS
KTGFACQCPEGILGDNCQFVEQDLCKEGSCAEHGTCERDLGRELGYRCICETDWVGPRCA
NQVDNRAPSLSDLFDVAPDRPRLEAKGLLLTMENVTSNFLPKIKPTEDIPETVAFNKESY
MMSKSVRASLPQRTDITMRIRRNSRSNGLLLFNRDESNGNDQFSNYHFVSLAIRDNAIEF
RFSWGTDTAIIRTPASVIGVGTWHVIRAIRRRGKGKVEVDGRVVARAKASGFGLLGVTGP
MFIGGVKFWEGIADKVYVRDGFDGCVSQLKINKKNLAFGKKFAKKNIGVCTEEVVAENND
ILSDMQPGGMFLARSRPSARFVRSSYASFHPSTFLHDGAAEQISFRFHATNPEGLIFFHG
EVIHDLEGRRASSTSNGRRRNGDFISVGLQASYLVYSFDLGGGRSSATSTFPVVDGLWHK
ATIVRRGSLALMWIDDHVAPTAVQSASTHNDANTPGRVYVGGAPDVRYATAGLYTSGFAG
CLQDFKLTSVSTGRATELGSRYLDDADTPSLDFSSSGALERVKLRACRSEPVGLFNLVNL
Nucleotide sequence
Length: 9,903
>Phmamm.CG.MTP2014.S230.g05761.01.t
ATGCAGTTGGATTCTTCATTGTCATTAAACTTTTTGAATAGAAGAATTCGAAGGGCTAGT
ACGGATCTTGATGTTGTGGCTGGAAGTGGAAGTGAAGCAACTCTTGATGATCTTGCTCCT
CCAGTAAACCCTTCTAATGAAGTTGACCAAAGCACATCAGGCACTGATTGGATTTGGTAT
CGAAATGACATCAACTTTTTGGATTCCATTGCTTTGACACCAAACTTGAAAGATCACCAT
ACCGATGAGTTTTATGATTTGGCTGGTGAAATTATGGTTTTGTTGGAAGACTATTTGGCA
TCCCAGTTTGATGGCTATCTTGAAGCCACTCCGTTGATGTTTACTCAAAGTGGCAATGAT
GCTATTCTTATGGTGGATGTTGGAACATGTGAAAGCATTTCATCTGATGAAATAACAAAT
GCCATGGTTTCACTTGTTAGAGGTGGTACACTAGGAAGATTTCGTTTAAGTCCCTATCCT
TTTAAAATCAAGTATATTGGCACTGACCCTGGCAGAGAGGAATGTCAAGTTACAGTGGCA
CCAACAGAACCATTTACAACGACATTCACTGTAGCAGATGAATTTGATGTCACCACAGCA
ACCGCAACCACAACCACCACTGAGCCTACACCTCCAGATGCTTACAGTTCTGAAGATGAC
GGGCCTGTGTCATGTGGACCCGGTCAAGCAACTTGTAAAAATCTTCAGTGCATTGACCGA
TTGTATGTCTGCGATGGAGCTATTGACTGCTATGATGGAAGTGATGAGGATTCATGCTCT
ACTGGCACTTCCAGTGAATGCGATCCCACACAATTTCTTTGCATTGGAACAGCTATCTGT
GCACAGAAGCATTGGCGATGTGATGGAGATGATGACTGTGGCAATGGCTTCGATGAGCGA
AACTGTCCAAATGAGCCAAATGGGGCCTGCCCATCAACACACTTTCAATGTGGCGATGGA
AGTTGTGTTCCTGGAAGTTACCAATGTGATGGAGAACAAGACTGTGAGGACAATAGTGAT
GAACGTGGATGCTCTGCCCCTGTTATTATTGTCCCACCACCCAATCGCATGGAAGCCAAA
CAAGGAGAGACAGTTACTATGAGATGTGAGGGTGTGGGTACACCTACACCCATTATTTCT
TGGAGAGTTAACTGGGGCAATGTGCCCCCAGAACCTAGGGTAACCATGACATCCAGAGAT
GGTGTCGGGACCCTGACTATAAGAAAAGTGAAACCCTCAGATCAAGGAGCTTATACATGT
GAAGGGCTGAACAGGGGAGGTGCAATCTTGGCTGTACCTGACCTTGTGTTGGTAGTGACT
GATTCTGAACCAACTGCTACGTCAATACCACCACCATTATCATCACCAACACCGGCTGAT
GAAACTGAAGAATGTCCCCCTGGGGAGTTCAACAGCTCATCTGATGCCACAGGCGGTTGC
AAGCGATGCTTCTGTTTTGGCGTCACTGATCAGTGTCATTCAAGCAACTTCGAATTTAAA
GAGATTGGAATAACATTTGATGAGCCAGAGGACGTAAGTGTAGTAGATCTTGAGCCAGCG
GAGATAGAAGGTGGAGTACCTGGATCTCCAGAACCGATCAACAGCAATCAAATTACTGTT
AACCCTGCTGCCAAAGAACTTCAACTGATTGACTTCAATCAAATTACTGTTAACCCCGCT
GCCAAAGAACTTCAACTGATTGACTTGTCCAAACGATTCTTGGCAGCTGCCCATTACTGG
AGCTTGCCTGCACAATTTTTGGGAGCCAAGATAAACAGTTATGGTGGAACGCTAAAATTT
TCATTTAGCTACAACAATTCTTACAACTTTCCTTCGCTGCCCACAAACAACAGCGACGTT
ATACTTGTGGGAAATGGGCAAACTTTGGTCTACCGAGATGATCGCCCGCACCCCAGCCCA
GTTAATAAGCACACTACAGAGGCAGTCTTTGATGAGGAAAAATGGAAAAAGCCTGATGGA
ACTCCAGTGACCAGAGAAGATATGCTAACTGTCCTTAGTAACATCAGCAGTGTCTTACTA
CGAACCGCTTATGACAATTCAATGTTGAGCACAGGGATTGGAGATGTTTCATTGCAAGTC
GCAGAGCCAAAAGAAAAAACCTCATCACCTGTTTCAGCTGGTGTCATTGCATCTTCAGTT
GAAGAGTGCATTTGCCCTGAAGGGTATACAGGCTTGTCTTGTGAGGAATGCAACATTGGA
TATGAAAGGCATATGACTGGCCCATACATCGGAGAATGTATACCAACAAGTGCTCCAATT
AAAGTATGCAAAAAGGGTTACACAGGCAAAAATTGCACAGAATGCGCTAAAGGCTACAGC
CCTTACCTAGGCGGCTGCACACGCTATCCTGACACTTATTGTGATGTGGCTGGTAGTATT
GGTGTTGGCTTTGGGCAGACTTGTCAGTGCAAGGAGGGTTGTCAGGGTCCCAGGTGCAAC
GAGTGCAAGCCTGGGCATTACTTTCTGTCTGAAGCAAATGCTGGTGGATGTCTGTCCTGC
TTCTGTATGGGAATTACTGATCAATGCACAAGTTCCAATTTGAACAGATCACATGTTATT
CCAAATTACGATCGTTCTGAGAACTTTGTTCTGACCAACGCAGCCGGCGTGGAGACTTAT
CAAAACGACGTCGTTTTCGTTACAGCGACGGAGAATCGCAGACATCCATATGTGGTGGCC
CATCTAGATCAATTGCATTCAGATGTTTTTTATTGGATGCTTCCCGATGAGTTTCTCGGA
AATAAGTTGACTTCATATGGTGGTCAGTTTGATTACATCGTGCAATACGAGCAAGGCAAT
AGCGCAAGGCCCATCACTCGAATTGCTGACCTCCGACTGACAGGAAACGGACAGACGTTG
ATCCACGTCAGTGGGCGTCATCCCCCGCCAGGAACGGACACCAGATACGTTGTACCAATA
CAAGAAAACAACTGGCAAAAACCTGATGGATCACAAGCCTCTCGTGAGGATCTCCTAATG
GTTTTAAGCAACATAGAGTCATTCCTTGTCCGGGCTTCCTACTCAAACCAGATGTTAGAA
AGCAGGATCACCAGCATGTACTTAGTAACCGCTGTGGATCGCGAGACTGGGCGGGAGAGA
GCGTTGGAAGTCGAAAAGTGCCGATGTCCAGTGGGATATCGCGGCCTGTCGTGTGAGGCA
TGCAGCCACAACACTGTGGGCGACAACTGCGAGGTCTGCGCTTCAGGATATTACGGCGAT
GCACGGGCTGGAGGTGTGGACGATTGCCAACCCTGTCCTTGCCCTACACTCGGCGGGCGG
ACGGATCAAGTTTCCCGGCCAACATGTAGAATGGGACGCGGTGGTCAACCTGTCTGCGAC
CGCTGTCCAATCGGCTATACCGGAGACCGATGCGAAAGGAAAGCACACAGGGTTCCAACT
GTGGTGAATGCAGACCGGGTTTCTTCCATCTCAGCTTCGAGTACAACGGCGGATGTCTGC
CCTGCTTCTGCATGGGACTCACCAGACAGTGCACCTCCGCAAGCTATCAACGTGGTAGCT
GACTTTAGTGAAGACAACGGAGGGTTCATGTTGACAAACCGTCAGTTGAACACACAAACA
ACCGATGGTTTTGAGGTGGTGGACGGGTTTAACTCATTGTCCTATCCTCGTATGGAGACC
TTACCACGCGGCATCACATATTACTGGAGACTATCAGAAGAATATCAGGGTGACAAGATT
GTGTCATATGGTGGACAACTCAACTACTCCGTTGGTTTCACTGCGTACCGGCGGGGAAGT
CCCATCAATGAACCGGACGTCATATTGCGTGGCAACGACATCGAGCTCTATTCATACATT
CCCGGTGACGTTGTGCAGAACGCGTTGACGGAACGGGGTACTGTCTTCCACGAGAAATAC
TGGACGCGTGCAGATGGGCAGGCAGCTACTAGGGAACACCTGCTGATGGCTTTAGCTGAT
GTAGAAGAAATTTTGATCCAAGCCACCTACTCCACCACTACCCTCCGTACCACGATCTCC
CAAGTTACCATGGAAACGGCGAGCGAGAGTGCTATCATGAGCGAACCTGCATTGGAAGTC
GAACATTGTGTTTGTCCCGACGGCTACGAAGGTCTTTCGTGTGAGGATTGCGCTCCCGGC
TACACAAGATCAGGTGGTGGAATATATCTCGGTTTATGCACAGCTTGTCAGTGCAACGGC
CATGCTGAGCTGTGTGACACCGAAACAGGCGAATGTTTGAACTGTCGAAACAACAGAGCT
GGTGCTCACTGTGAAAATTGTGCACCCGGATACTTTGGCAACCCAAATGTTGAAAACGGC
TGTAGGCCATGTGCTTGTCCGGGTATCGGCAAAAACAGTTTCTCGGACACCTGTGATTAC
GACACCACAAGCAACACCTTGACCTGCACAGCTTGCCAGGAAGGTTATACTGGGGATCGA
TGTGAGAGCTGTGCCACTGGATACGTTGGAAATCCAACCGACCCTGTTGACGGAAGCTGT
GTAAGAATAGACGAAAACCATGTGTCAGATTCCCCGGATCTGCCTAGGGTTTCAGTTTCA
CCCAAGCACGTCAACGCCAACCCTGGACAAACAGTTACACTGAGGTGCGCTGTTGTGTCG
AGGTCAAGAGTTCGGATAACCTGGGAGAGGTCTGGTCAAGGTTTGCCGTCCAACACACTG
GTCACCAACAACGGTCAAACACTGACCCTACCTAACGTGGGCAGGTCATCTGTTGGAACA
TTCGAATGTGTGGTGGCCAACAGATATGGAAGCGCAAGTGATAGCGCTGTTGTAACCCTA
GCAAGACCACAACCAATGATCGCCGTCCACGTCGAAGAACCGCGTCAAGTGACAGTGCAA
GTCGGGTCTGAAGTCTCGTTCGTTTGTACAGCCGCCAGCAAGGTGCCAGAGGCCTTTATC
GTCACTTGGACAAAACGCGGCGGTCGCCTGCCACTAAATCGTGCCACTGACTTTGACGGA
ATCCTTCACATCACAAACGTGGACCTCTCGGACTCTGGCACGTACATGTGTACTGGTTCG
AGCATGTACGGAATAGCACAGGAGTCAGCCACCCTTCGCGTGATCCAAGTGGATGACGCA
GCCACCCCAGTGGTAGTGGTCACCCCCAACAATCAGAGCGTCATGAAGGGCGATGACGTG
ATTTTTTACTGCAATGCTGAAGGCTATCCAGATCCTGAAGTCGAATGGCAACGAGTTGAT
GGTAACCCCATGTCCAACAATGTCCATGTGAGCGGTCAGATGCTCATGATTCCGTCAGCA
TCTATGCACGACCGAGCGCTTTACAGATGTCGGGCATCAAACCAGCACGGAACTGCTGAA
GCTACTGGTGCCCTTGAGGTCTTTGACGGAGTCCCTCCTGTTGTTACTGTGGTTACGCCA
GAAGTATCTGTTATCATCGGAGAAAGTGTTGCTTTGCGTTGCACAGCCACTGGTGAACCT
GCACCTACTTTCTCATGGGTGAAGCGGGGACGCCTTCTTCCACCAAACTCATTTGAAGAA
GGTGGAATTCTGCGAATTGAGTCCGCAGTCACGAACAACGAAGGTGTTTACCAATGCACG
GCACACAACACCTTTGGACAAGATTCCGGTTTTGTCCGAGTCGACGTTCTTCCGCAAGTT
CCTGCTGAAAAGCCGATTTGTCGCACTGAACCACAGGAAGTGACGGCATATGTGGGAACA
AACAGCACCACGACTTGCTACATCGGGGGAACTCCCATGCCAACGATGACGTGGGAACGC
GAGGATGGGCTGCCGTTGGACGAAAACATCGTGGTAAAAGACAACAAACTGCAAGTCATA
GAAGTCCAGGATTCAAATGCTGGTCGTTATGTGTGCGTAGCAACCAGTGCTGGTGGAGTT
ACTAAAAGTCGCATGACACTGAACGTCGTGAAAAAAGATCTTCCACACGTTACGGTCGTA
CCAGCTCGAACGCAACGGGTGCAAGTGGGAGATAATGTGGAGTTTAATTGTCAGACTAAC
GAGTCAGATGCCGATGTGACATGGCTGCGTTCCAACCAGCGACCCTTCACAGGTCAAACG
TCACTGTCGGGTGATAATCGCATCATCCGCTTTCAAAACGTGTCCCTCCGCGAATCCGGT
TACTACTCCTGCATTGCAAGTAATGTTGTCGGCCACCGAGAGGTCCTCGTCTATATGGAA
GTTCTGCAAAAGCCAGTTATCAAAGTTCTGCCTGCCAGGATCATCACTTTACGCGACGGC
GAATCAGTCGCATTAAGATGTATGGCGGAAGGCAATTCCCGTCCATCTGTCACCTGGAAG
AAACTCAGTGCCACTGAAGGCGTTCACCCAACGTCCGGTTACGAAGCTCCTATAGTGACG
GTGGGGACTTCCCTGAAGCACGTGACCGTGGGAACCGAAGTCCAACTTCGATGTGTCGCT
TCAGGAACGCCAGCGCCTACTATTGTGTGGTCTAAAGAAAACCAAGACCTTCCAGCAGGA
AGCCGCCAAAGTGAAGGAATCCTTTACATTCCTCAGTTTATGACAGAAGACGCGGGAAAA
TATGTTTGCAAAGCTGCCAACGAATTAGGGATGGACGAAAAGTCTGTCGACGTTGAATTA
CAATTTATTACATTTAACCCAGTTCCTCCTTCCCTTGCGGTCAAACCCTCAGCTGTCGTC
TCTCTTGCACCGGGACAATCTACAAATATCACGTGTTCAGCTATATCGGGGACACCCCCT
GTTGCGTTCAGTTGGAAAAAGGACGACGGTGTTGCATCATCAGTGTTAACTGCTGGTGGA
CTAATGCAAGTCACTGGCTTTGACCCTCTTACCGATGCTGGAGTTTACACCTGCATAGGA
ACTAATGATGCAGGATCGTCCACTACCTCACTTACTATTCTAGAAGCCAATCCACCAGTG
ATACAAGTTCAACCCACAGAAGTCACAAAGACAGTCGGCGACTTCATTGAGTTCCAATGC
ACACCAGATGGCGATGCACTGGATGTCGAAATTTCTTGGAGTCGAGTCGACGGCCAAAGC
CTCCCCGAAGACCGGGCATTGACGAATTTAAACGGGCGATTGGCAATTGAGGATATACAA
GTAGCAGATGCTGGGGTTTACCAATGTACGGCAAGCAATGCAGCCGGAACCACATCTGAC
ACAGTCACACTGCAAGTGCAAGCTGCACCAACTGCGTTTATTGACCTGATCGGAAATGAG
GACATTCTGATTGAAGGACGAACTTATGAAATCTTCTGCAACTCGTCGGGGATTCCAAAA
CCTGACATGTTTCTATACAAGGGTGACACTCAACTTCCACTTGACGACGAGAGTCGACAC
GCAATGAATGGAACAGCTTCGGACTCGGGAACATACGCTTGTGTGGCAAATAACTCTGTT
GGGACAACAAGAGACACGTTGGACGTTTTAATACACGGATCGCCAGAGGTCAAAGTTGAA
CCAACATTTCTGGAGGTACGAGCTCACGAACCACTCACGTTAAGTTGTCTCGTCAACTCT
ACTCTTGCTTCTAACATTACTTGGAGCAAACAGGATGGGGAACTATCTCCAAACATGAAC
GAGGTTTTGGATCTCGGAAACGCGCTGCCTGAAAACAGCGGAGTTTACGTTTGTTCTGCT
GCAAACCAGGTGGGATCTGTGCAGCAACAAGCCACAGTGGTCGTACATTCTTTTATTCCG
TTCTTCTCGCAAACTGAACGTTCTTATGTCGCTATGGACTTGACGCCCAACCAGTTCTAC
ATCAGTTTCAACATCAAACTCTCGTTCCGAGCAAATTCTCTCAACGGACTTCTCTTGTAC
GCTTTTAGCATGGGAAGCGACTTTATCAGCCTCAACATGGCCGACGGATACTTGGATTTC
CGTTTTGACGTGGGTTCGGGGTCGGTTACCATCCGAAGTGCGTCGGCTGCTGTGATTGGT
GAATGGCACACGGTGGTGATTTCCCGGAACGGCAAGACAGGAGAGATCCGATTGGACGAC
GGAGAAGTGGTGAAGGGGAAATCCCCGGGAGAGTTTCGTGCTCTGGACGTCGACTCGCAA
CTCTACCTTGGAGGAATACCACGTGACTTGGACGGACGTCTGCCGCGTGAAATACAGAAC
CTGGGCCACGATTTAGGATTTTACGGTTGCATCAGCCAACTCGAGGTCAACACGGAGGTC
ATCGATATGGGGTCACCTGAGGTCAATCGTGTAGGCATTGTTCGGTGTAAGACTTGCGGA
GCCGACAAAAGCGACTCCCCGTGTTATAACGAGGGAATGTGCGTGGAAACCTACGACTCG
AAAACCGGATTCGCGTGTCAATGTCCTGAGGGAATACTCGGAGACAATTGCCAATTCGTA
GAACAGGATCTCTGCAAAGAAGGATCCTGTGCAGAACACGGTACATGTGAGCGTGATTTA
GGTCGTGAACTCGGTTACCGCTGTATATGTGAAACTGACTGGGTCGGCCCTCGATGTGCG
AACCAAGTCGACAACCGTGCACCTTCATTAAGCGACCTGTTTGACGTAGCACCCGATAGA
CCAAGGCTGGAAGCCAAGGGACTGTTACTGACCATGGAAAACGTAACAAGTAATTTCCTA
CCAAAGATTAAACCCACTGAGGATATTCCAGAGACTGTAGCATTCAACAAGGAATCGTAC
ATGATGTCGAAATCGGTCCGTGCATCTTTGCCACAACGCACCGACATCACGATGAGGATC
AGAAGAAATTCAAGATCCAACGGTCTCCTGTTATTCAACAGAGACGAAAGTAATGGAAAT
GATCAGTTTTCAAACTACCACTTCGTGTCACTGGCGATCCGCGACAACGCTATAGAATTT
CGGTTTTCTTGGGGAACAGACACTGCAATTATCAGAACTCCAGCCTCAGTAATCGGGGTT
GGGACTTGGCACGTGATCAGAGCAATTCGTCGTAGAGGCAAGGGAAAGGTCGAAGTTGAT
GGACGTGTCGTGGCCCGTGCTAAGGCGTCCGGTTTCGGTCTCCTGGGGGTCACTGGACCC
ATGTTTATTGGCGGCGTTAAGTTCTGGGAAGGCATTGCAGATAAAGTTTACGTTCGTGAT
GGATTTGACGGATGCGTGTCACAGCTGAAGATCAATAAGAAAAACTTGGCTTTCGGTAAA
AAGTTCGCAAAGAAAAACATTGGCGTTTGTACGGAGGAAGTTGTGGCCGAAAACAACGAC
ATTTTGTCGGATATGCAACCAGGTGGGATGTTCCTTGCACGAAGTCGCCCTTCCGCGCGT
TTTGTCCGCAGTTCGTATGCCTCATTCCACCCAAGCACTTTCCTTCATGACGGTGCAGCT
GAACAGATCAGCTTCCGTTTTCATGCAACCAACCCCGAAGGCCTGATTTTCTTCCATGGA
GAGGTCATACATGACTTGGAAGGTCGTCGGGCTTCATCCACGAGCAACGGTCGGCGGCGG
AACGGGGATTTTATTTCCGTCGGTCTTCAGGCATCCTACCTTGTGTACAGTTTCGACCTT
GGCGGCGGACGTAGCAGCGCAACAAGCACCTTTCCAGTCGTCGACGGTTTATGGCACAAG
GCGACAATAGTCAGGCGTGGCTCTCTGGCTCTGATGTGGATCGACGATCACGTGGCACCC
ACAGCGGTCCAATCAGCGTCGACCCACAACGATGCCAATACCCCAGGCCGGGTTTATGTG
GGTGGAGCACCCGATGTAAGATACGCTACAGCTGGTCTATACACGTCAGGTTTCGCCGGT
TGTCTACAAGACTTCAAACTGACTTCGGTCTCGACTGGCCGAGCAACCGAACTCGGTTCA
AGATACCTTGATGATGCTGACACCCCATCCCTCGATTTCAGCAGCTCTGGGGCCCTGGAA
AGGGTAAAGTTGCGGGCGTGTCGTTCCGAACCTGTTGGTTTATTCAACCTGGTCAACTTG
TAA
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[224-261] 5.5E-11 - T[266-304] 2.6E-8 - T[309-346] 5.6E-13 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[224-261] 3.8E-9 - T[266-302] 1.31E-7 - T[309-348] 7.72E-11 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[224-260] 12.725 - T[266-303] 12.225 - T[309-345] 14.188 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[224-259] 7.8E-9 - T[266-302] 2.0E-6 - T[309-344] 1.3E-11 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[225-259] 7.66386E-11 - T[267-302] 6.76089E-9 - T[310-344] 1.02938E-13 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[235-256] 7.1E-18 - T[278-299] 7.1E-18 - T[320-341] 7.1E-18 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[237-259] . - T[322-344] . |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[346-431] 5.68E-19 - T[1514-1600] 3.18E-15 - T[1611-1694] 7.13E-16 - T[1702-1788] 9.79E-18 - T[1791-1877] 5.0E-19 - T[1883-1970] 3.8E-13 - T[1979-2093] 5.91E-15 - T[2115-2198] 1.48E-17 - T[2176-2292] 4.56E-11 - T[2298-2392] 2.41E-18 - T[2403-2475] 1.84E-10 - T[2474-2559] 6.53E-13 |
| Gene3D |
Ig-like_fold (IPR013783) - T[346-449] 9.0E-18 - T[1513-1599] 1.4E-16 - T[1600-1695] 9.6E-19 - T[1696-1785] 5.1E-18 - T[1786-1879] 2.5E-17 - T[1880-1971] 6.5E-15 - T[1975-2069] 6.5E-13 - T[2115-2203] 1.2E-18 - T[2208-2293] 7.9E-10 - T[2294-2389] 5.5E-18 - T[2399-2472] 8.0E-9 - T[2474-2558] 4.4E-13 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[347-420] 12.386 - T[1515-1599] 14.455 - T[1605-1693] 12.586 - T[1703-1786] 12.695 - T[1793-1877] 13.203 - T[1878-1968] 11.098 - T[1975-2056] 11.842 - T[2065-2101] 8.23 - T[2117-2199] 12.876 - T[2210-2292] 12.078 - T[2298-2385] 12.894 - T[2390-2470] 7.014 - T[2475-2554] 11.624 |
| Pfam |
Ig_I-set (IPR013098) - T[352-427] 4.0E-14 - T[1515-1599] 5.9E-11 - T[1888-1969] 5.8E-8 - T[2299-2386] 1.2E-12 |
| SMART |
Ig_sub (IPR003599) - T[354-440] 5.5E-9 - T[1521-1601] 1.9E-8 - T[1614-1695] 4.3E-14 - T[1709-1788] 2.2E-9 - T[1799-1877] 1.8E-11 - T[1891-1970] 4.5E-5 - T[1982-2062] 4.4E-8 - T[2123-2201] 1.8E-8 - T[2217-2294] 0.22 - T[2305-2387] 5.8E-11 - T[2398-2472] 31.0 - T[2481-2556] 6.0E-11 |
| SMART |
Ig_sub2 (IPR003598) - T[360-427] 3.1E-10 - T[1527-1590] 5.9E-10 - T[1620-1684] 1.7E-5 - T[1715-1777] 2.3E-11 - T[1805-1866] 2.7E-15 - T[1897-1959] 2.1E-5 - T[1988-2051] 5.7E-11 - T[2129-2190] 7.6E-15 - T[2223-2285] 3.4E-7 - T[2311-2376] 3.6E-7 - T[2404-2461] 0.042 - T[2487-2545] 2.4E-8 |
| ProSiteProfiles |
Laminin_IV (IPR000034) - T[507-722] 34.329 - T[864-1046] 33.758 - T[1184-1362] 35.316 |
| SMART |
Laminin_IV (IPR000034) - T[574-703] 2.3E-33 - T[906-1033] 3.1E-38 - T[1223-1349] 5.7E-36 |
| Pfam |
Laminin_IV (IPR000034) - T[579-709] 4.1E-33 - T[911-1045] 6.6E-35 - T[1228-1361] 1.6E-31 |
| SMART |
Laminin_EGF (IPR002049) - T[723-786] 8.1 - T[789-837] 1.3 - T[1047-1089] 0.028 - T[1092-1160] 1.9 - T[1396-1441] 3.8E-10 - T[1444-1500] 2.3E-7 |
| ProSiteProfiles |
Laminin_EGF (IPR002049) - T[793-839] 11.626 - T[1047-1091] 12.616 - T[1396-1443] 17.7 - T[1444-1502] 12.254 |
| Pfam |
Laminin_EGF (IPR002049) - T[794-837] 0.0027 - T[1047-1084] 0.0013 - T[1362-1383] 0.0045 - T[1396-1441] 4.5E-8 - T[1444-1495] 2.2E-6 |
| ProSitePatterns |
Laminin_EGF (IPR002049) - T[808-842] . - T[1058-1094] . - T[1412-1446] . - T[1469-1500] . |
| SMART |
EGF-like_dom (IPR000742) - T[1048-1090] 200.0 - T[1093-1132] 75.0 - T[1404-1442] 28.0 - T[1443-1482] 59.0 - T[2738-2778] 0.21 - T[2784-2820] 0.066 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[1472-2727] 3.89E-35 - T[2807-3047] 3.41E-25 - T[3077-3251] 1.86E-26 |
| Pfam |
Ig-like_dom (IPR007110) - T[2480-2553] 1.2E-6 |
| ProSiteProfiles |
Laminin_G (IPR001791) - T[2559-2739] 40.27 - T[2870-3050] 29.535 - T[3076-3287] 31.315 |
| SMART |
Laminin_G (IPR001791) - T[2581-2719] 9.1E-31 - T[2892-3034] 3.5E-20 - T[3099-3250] 6.9E-31 |
| Pfam |
Laminin_G (IPR001791) - T[2589-2718] 9.5E-25 - T[2904-3033] 6.3E-17 - T[3107-3247] 9.9E-18 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[2740-2778] 13.137 - T[2781-2820] 14.6 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[2766-2777] . - T[2808-2819] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 26.999 % | 313 | 8.37E-85 |
| HMCN2_HUMAN | 27.055 % | 306 | 9.52E-83 |
| PGBM_HUMAN | 31.566 % | 1246 | 0 |