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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.36.v4.A...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S22.g00896.01.t

Possible name(s)

TNN

Location

S22 [11,663 / 15,473]

Sequences

Amino acid sequence

Length: 357

>Phmamm.CG.MTP2014.S22.g00896.01.p
MEIYRTCGNPGDTTAQALQCTTSLATFSSNPVETTTCTSVCASSDCNNQLATSLMACASG
CSGNGFCDYLSGSCVCNTGFSGADCSNDGRTIRSCVQCDDAVSSGCPATLTTAACPDSTY
DQCTASRTTLYDANGAMVRTVVTRGCSSSSSVRNDECTYSTPADTTLDGYFEYTCTRSCT
TNGCNTFTLQGYELVSEERGCRSAALTSQCADIQLDGSNGIVTTCQETCQTHGCNDGWPN
RPRCLQCVSSPSTVASGSDSCLYNPEEASDCSRPYHQYCVYIDQGRSGRLTSHRPRCLQC
GSIPSTVASGSDPCLYNPEEASACSRPYHQYCVYIDQGRSGRLTCTYEKEIHELCKC

Nucleotide sequence

Length: 1,074

>Phmamm.CG.MTP2014.S22.g00896.01.t
ATGGAAATCTACAGAACTTGTGGAAACCCTGGTGACACCACAGCACAAGCACTCCAGTGC
ACGACTTCTCTTGCAACGTTTTCTAGCAACCCCGTTGAAACAACAACTTGTACATCTGTG
TGCGCCAGCAGTGATTGCAACAACCAACTTGCAACAAGTCTAATGGCTTGTGCTAGTGGC
TGCAGTGGAAACGGATTCTGTGACTATCTGTCAGGCAGCTGTGTGTGCAATACCGGATTC
AGTGGAGCTGACTGCAGCAATGACGGGAGAACCATACGATCTTGTGTGCAGTGCGACGAC
GCGGTTTCATCTGGTTGTCCAGCTACACTCACAACAGCCGCGTGTCCTGATTCAACCTAC
GATCAATGCACAGCCAGCCGAACTACACTATATGATGCAAATGGCGCGATGGTTCGGACT
GTTGTTACTCGTGGCTGCAGTAGTTCTTCATCTGTTCGCAACGACGAATGCACTTATTCA
ACGCCAGCAGATACAACTCTTGATGGTTACTTTGAATACACCTGCACACGAAGTTGTACT
ACTAACGGTTGCAATACATTCACACTTCAAGGGTATGAACTGGTATCTGAAGAACGGGGT
TGTCGATCCGCAGCTTTAACATCACAATGCGCAGATATCCAACTTGACGGTTCTAACGGT
ATAGTGACGACTTGCCAAGAAACTTGTCAAACTCACGGATGCAACGATGGGTGGCCAAAC
AGACCAAGATGCTTGCAATGTGTCAGCAGTCCATCTACTGTAGCATCAGGATCGGACTCA
TGTCTCTACAACCCTGAAGAAGCCTCAGACTGTTCCCGACCATACCACCAGTACTGTGTT
TACATAGATCAAGGCAGATCAGGAAGGCTGACATCACACAGACCAAGATGCTTGCAATGT
GGCAGCATTCCATCTACTGTAGCATCAGGTTCGGATCCCTGTCTCTACAACCCTGAAGAA
GCCTCAGCCTGTTCCCGACCATACCACCAGTACTGTGTTTACATAGACCAAGGCAGATCT
GGAAGGCTGACATGTACGTATGAAAAAGAAATTCATGAACTTTGCAAGTGCTAG

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[53-86] 11.34
Pfam
EGF_extracell (IPR013111) - T[57-85] 1.9E-5
ProSitePatterns
EGF-like_CS (IPR013032) - T[74-85] . - T[74-85] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value