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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. EST 'FF945275.1' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Clone 'cima877412' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S228.g05728.01.t

Possible name(s)

CRABP1; CRABP2; FABP2

Gene model

Phmamm.CG.MTP2014.S228.g05728

Location

S228 [54,869 / 58,684]

Sequences

Amino acid sequence

Length: 104

>Phmamm.CG.MTP2014.S228.g05728.01.p
AIAGEWELDKNENYDDFLKKVGMNAIKRGMVVKLGGSLSIQAVGDSKFKVKSVNGPKTKE
REMPIGQDFDDEGPNGGATRGSWKVEGGKMVGRFKTEKGKEFVM

Nucleotide sequence

Length: 316

>Phmamm.CG.MTP2014.S228.g05728.01.t
CCGCAATCGCAGGAGAATGGGAATTGGACAAAAACGAAAACTACGACGATTTTCTCAAGA
AAGTTGGAATGAACGCTATTAAAAGAGGAATGGTCGTCAAACTGGGTGGCAGTCTGTCCA
TTCAGGCCGTTGGCGATTCAAAATTCAAAGTGAAATCGGTTAACGGACCCAAGACCAAAG
AACGCGAGATGCCCATTGGTCAAGACTTCGATGACGAAGGTCCCAATGGTGGTGCCACAA
GAGGGTCCTGGAAAGTTGAAGGGGGAAAAATGGTCGGAAGGTTCAAAACTGAAAAGGGAA
AAGAGTTTGTGATGTC

InterProScan

Gene3D
Calycin (IPR012674) - T[1-104] 2.8E-19
PANTHER
ILBP (IPR031259) - T[1-103] 5.7E-31
PANTHER
FABP2 (IPR031272) - T[1-103] 5.7E-31
SUPERFAMILY
Calycin (IPR012674) - T[2-101] 2.23E-19
PRINTS
Fatty_acid-bd (IPR000463) - T[2-24] 4.8E-6 - T[62-78] 4.8E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value