- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S222.g05639.02.t
Possible name(s)
AL139260.3; GJA10; GJD2
Gene model
Location
S222 [42,962 / 46,892]
Amino acid sequence
Length: 333
>Phmamm.CG.MTP2014.S222.g05639.02.p
MVTTPSIVFMVYSAHQIKKKPPHKEKTSSSGPTPSPTKKAEMANDHGQDDDDEKRKRKKS
VRPTSLMGPNEANENQVLESRKIRQSVIQEMFGEEKSAFSQHYVLYAASVLMRTLVEVLF
ILLQYKLFGFRISELYKCEGAPCPNVVDCFVSRPMEKTIFLWFMFVIAVICLTLNVAEMY
YLMWQFGIRRTRLERRRRQMHRQTISESRGVTLADAEILDGGILSANQAPPPDYRGLASL
ADDDAMELVPTTGVNKTGMAMSFSLDDAMLPEQGNVVSRFQAYGVGKPGSAGGSSRSNNF
IAPVEVTLVDQPYLANPRTDNNKPKTNDYYDYV
Nucleotide sequence
Length: 1,002
>Phmamm.CG.MTP2014.S222.g05639.02.t
ATGGTGACGACACCGTCCATCGTGTTTATGGTCTACTCGGCGCATCAAATCAAAAAGAAA
CCGCCACATAAGGAAAAAACTTCGAGTAGTGGTCCAACTCCGTCGCCGACTAAGAAAGCG
GAGATGGCTAACGATCATGGCCAGGATGATGACGACGAAAAAAGAAAACGGAAGAAATCT
GTGAGACCGACTTCTCTAATGGGGCCCAATGAGGCAAACGAAAATCAAGTTCTGGAATCG
CGCAAAATTCGTCAGTCTGTGATCCAGGAAATGTTTGGCGAGGAAAAATCTGCCTTCTCT
CAACATTACGTTCTATATGCAGCATCCGTTCTTATGCGAACTCTTGTCGAAGTGCTTTTT
ATTCTTTTGCAGTATAAACTGTTCGGGTTCCGTATTTCGGAGCTCTACAAATGCGAAGGA
GCCCCATGTCCAAATGTTGTCGATTGTTTTGTGTCACGTCCGATGGAGAAAACCATATTT
CTCTGGTTTATGTTTGTCATCGCTGTCATTTGCCTCACTCTCAACGTTGCTGAGATGTAC
TATTTAATGTGGCAGTTCGGCATTCGTCGAACCCGTCTCGAGCGACGACGACGCCAAATG
CATCGACAGACGATTTCCGAATCTCGCGGCGTTACTTTGGCTGATGCGGAAATCCTGGAC
GGTGGAATCCTCTCCGCAAACCAGGCGCCACCTCCCGACTATCGCGGACTTGCAAGTCTC
GCCGATGATGACGCTATGGAGCTGGTACCAACAACCGGAGTAAACAAGACCGGAATGGCA
ATGTCCTTTAGTTTGGACGATGCTATGTTACCCGAACAGGGCAATGTGGTGTCCAGGTTC
CAAGCATACGGTGTTGGAAAGCCAGGTAGCGCCGGTGGTTCTTCAAGAAGCAACAACTTT
ATCGCCCCCGTTGAAGTAACCTTGGTGGACCAGCCTTACCTCGCCAACCCCCGCACAGAC
AACAACAAACCAAAAACAAATGATTATTACGATTATGTGTAA
| PANTHER |
Connexin (IPR000500) - T[1-197] 2.9E-52 |
| Pfam |
Connexin_N (IPR013092) - T[1-184] 6.0E-45 |
| PRINTS |
Connexin (IPR000500) - T[102-128] 7.8E-25 - T[138-158] 7.8E-25 - T[159-182] 7.8E-25 |
| SMART |
Connexin_CCC (IPR019570) - T[116-182] 2.7E-40 |
| ProSitePatterns |
Connexin_CS (IPR017990) - T[138-154] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXA10_HUMAN | 41.844 % | 103 | 1.85E-24 |
| CXD2_HUMAN | 29.661 % | 100 | 2.01E-24 |
| CXA9_HUMAN | 54.545 % | 99.8 | 2.95E-23 |