- Clone 'csef008a09' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Moocul.CG.ELv1_2.S50...' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S222.g05639.01.t
Possible name(s)
AL139260.3; GJA10; GJD2
Gene model
Location
S222 [42,141 / 47,827]
Amino acid sequence
Length: 267
>Phmamm.CG.MTP2014.S222.g05639.01.p
MGPNEANENQVLESRKIRQSVIQEMFGEEKSAFSQHYVLYAASVLMRTLVEVLFILLQYK
LFGFRISELYKCEGAPCPNVVDCFVSRPMEKTIFLWFMFVIAVICLTLNVAEMYYLMWQF
GIRRTRLERRRRQMHRQTISESRGVTLADAEILDGGILSANQAPPPDYRGLASLADDDAM
ELVPTTGVNKTGMAMSFSLDDAMLPEQGNVVSRFQAYGVGKPGSAGGSSRSNNFIAPVEV
TLVDQPYLANPRTDNNKPKTNDYYDYV
Nucleotide sequence
Length: 2,302
>Phmamm.CG.MTP2014.S222.g05639.01.t
AAGAAACATAAAATGTCTTGGCATTTCGTTGAACGATGGCTACAAAAGGTCAACCAGCAC
TCTACCTTGATCGGAAAGTTCTGGATCACCTTTCTTATCGTGTTTCGTATTGTCGTGGTC
TCGAGCGTTGGTGATCGGGTGTATTCGGATGAACAGAGCGAGTTTAAATGCAATACGATG
CAGGTTGGGTGTCCGAACGTTTGTTTCAATCAATTTTCGCCAATATCTCACATACGATTT
TGGTCGTTTCAAATCATAATGGTGACGACACCGTCCATCGTGTTTATGGTCTACTCGGCG
CATCAAATCAAAAAGAAACCGCCACATAAGGAAAAAACTTCGAGTAGTGGTCCAACTCCG
TCGCCGACTAAGAAAGCGGAGATGGCTAACGATCATGGCCAGGATGATGACGACGAAAAA
AGAAAACGGAAGAAGTAACTACATTTGGATATTTTTGCAAAGATACAACAAAACGCTCCA
GTGTCGCGACACACTTTTTTATTTGGAGACTGTTTATTGTTTTGTTTACTTCGTTTTATC
TATTAAAGACGCTTCATAGATCTAAACAATTAGATAATGGACAAAATTTCGGACAATTTT
TTTCTCCAAAACATGGACGCCAGACCCCCTTAATTCCGGTATTGTTTGATTTTAGATCTG
TGAGACCGACTTCTCTAATGGGGCCCAATGAGGCAAACGAAAATCAAGTTCTGGAATCGC
GCAAAATTCGTCAGTCTGTGATCCAGGAAATGTTTGGCGAGGAAAAATCTGCCTTCTCTC
AACATTACGTTCTATATGCAGCATCCGTTCTTATGCGAACTCTTGTCGAAGTGCTTTTTA
TTCTTTTGCAGTATAAACTGTTCGGGTTCCGTATTTCGGAGCTCTACAAATGCGAAGGAG
CCCCATGTCCAAATGTTGTCGATTGTTTTGTGTCACGTCCGATGGAGAAAACCATATTTC
TCTGGTTTATGTTTGTCATCGCTGTCATTTGCCTCACTCTCAACGTTGCTGAGATGTACT
ATTTAATGTGGCAGTTCGGCATTCGTCGAACCCGTCTCGAGCGACGACGACGCCAAATGC
ATCGACAGACGATTTCCGAATCTCGCGGCGTTACTTTGGCTGATGCGGAAATCCTGGACG
GTGGAATCCTCTCCGCAAACCAGGCGCCACCTCCCGACTATCGCGGACTTGCAAGTCTCG
CCGATGATGACGCTATGGAGCTGGTACCAACAACCGGAGTAAACAAGACCGGAATGGCAA
TGTCCTTTAGTTTGGACGATGCTATGTTACCCGAACAGGGCAATGTGGTGTCCAGGTTCC
AAGCATACGGTGTTGGAAAGCCAGGTAGCGCCGGTGGTTCTTCAAGAAGCAACAACTTTA
TCGCCCCCGTTGAAGTAACCTTGGTGGACCAGCCTTACCTCGCCAACCCCCGCACAGACA
ACAACAAACCAAAAACAAATGATTATTACGATTATGTGTAATTGTGTGACGCTGCAACTT
TATTGCCACAAAACATTACCTACCCTCTATTTTCAAATGAAAACATTACCTACCCTCTAT
TTTCAAAAGTTTGATACCTTTGCATGGACTTCATCGACTTACAAAGTTCGTAGGATAGTT
TTAGATCGCGTAGCTGTAACCTTACCAGTAGTGGTAAACTTGCGGCGACGGTTCTTGTTG
TTTGTAAGAGTAGCCATGCTTAATATCCTGGGAAAGCGTTTGCCATGATGGCAAAATGTT
TCGTAAGCCATTAACAGTCAGCATATTCTGTTAACCATCAACAGCATGTTTTATATTCGT
ATTTAAATCGTATGGACATACATGTTTCACTTTTGCTTCAAACATAATGTCTCAAAGAGA
AAGTAGCTTGTCGTACCAGGCTTTCACATTCGTTTTTCGGTGCTTTTTAGGGTTTATTCA
ATATTTTAGGATTGACACGAAAGCAGACATGTGTGACCCTAACAAACCTTTACGTACTAT
CCTTTTATGTTGGTGCACATATGACATTGTTGTATGTCACGTTTTTCTTGTACTTTACGC
CACGTATTCCTGTCACTTTCAGAGAGCTAAGCAACAGATTGATTTTGTTCAAATGTAACA
TGAGAATAGACCGTACAACGAGGACCGGGCTACACTTGTCTGTGGGTTTTTTCCCTCCCT
CTGTGGGTTTTTCCCCTCCTTGTACCTTTTCGCTACATTTACAATTAACATATGTTTGTT
ATTGAATTCAATCATTTGCTTACGAGCTGTTTCAACATTTTTTCTGCACTTTGCCAATCA
TAGCATTCTGTTCTTGTCCAGC
| Gene3D |
Connexin_N_sf (IPR038359) - T[3-131] 1.2E-35 |
| PANTHER |
Connexin (IPR000500) - T[12-131] 1.7E-42 |
| Pfam |
Connexin_N (IPR013092) - T[16-118] 2.3E-36 |
| PRINTS |
Connexin (IPR000500) - T[36-62] 4.5E-25 - T[72-92] 4.5E-25 - T[93-116] 4.5E-25 |
| SMART |
Connexin_CCC (IPR019570) - T[50-116] 2.7E-40 |
| ProSitePatterns |
Connexin_CS (IPR017990) - T[72-88] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXA10_HUMAN | 47.059 % | 97.8 | 4.61E-23 |
| CXA9_HUMAN | 54.545 % | 99.4 | 1.28E-23 |
| CXA3_HUMAN | 51.25 % | 97.8 | 2.5E-23 |